Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
XRCC1P18887 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
XRCC1P18887 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
XRCC1P18887 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
XRCC1P18887 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC18.94■□□□□ 0.62
XRCC1P18887 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
XRCC1P18887 AC211429.1-201ENST00000415277 523 ntBASIC18.94■□□□□ 0.62
XRCC1P18887 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
XRCC1P18887 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
XRCC1P18887 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
XRCC1P18887 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC18.94■□□□□ 0.62
XRCC1P18887 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC18.94■□□□□ 0.62
XRCC1P18887 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC18.94■□□□□ 0.62
XRCC1P18887 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
XRCC1P18887 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
XRCC1P18887 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
XRCC1P18887 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC18.94■□□□□ 0.62
XRCC1P18887 AL049812.1-201ENST00000432563 2267 ntBASIC18.94■□□□□ 0.62
XRCC1P18887 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.94■□□□□ 0.62
XRCC1P18887 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
XRCC1P18887 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
XRCC1P18887 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
XRCC1P18887 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC18.93■□□□□ 0.62
XRCC1P18887 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
XRCC1P18887 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
XRCC1P18887 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
XRCC1P18887 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
XRCC1P18887 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
XRCC1P18887 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
XRCC1P18887 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC18.93■□□□□ 0.62
XRCC1P18887 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
XRCC1P18887 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
XRCC1P18887 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
XRCC1P18887 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
XRCC1P18887 MMP23A-201ENST00000234610 1017 ntBASIC18.93■□□□□ 0.62
XRCC1P18887 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
XRCC1P18887 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
XRCC1P18887 AC087499.1-201ENST00000418141 1075 ntBASIC18.93■□□□□ 0.62
XRCC1P18887 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
XRCC1P18887 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC18.93■□□□□ 0.62
XRCC1P18887 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC18.93■□□□□ 0.62
XRCC1P18887 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC18.93■□□□□ 0.62
XRCC1P18887 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC18.93■□□□□ 0.62
XRCC1P18887 MIR6786-201ENST00000616843 113 ntBASIC18.93■□□□□ 0.62
XRCC1P18887 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
XRCC1P18887 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
XRCC1P18887 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
XRCC1P18887 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC18.93■□□□□ 0.62
XRCC1P18887 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
XRCC1P18887 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
XRCC1P18887 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
XRCC1P18887 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
XRCC1P18887 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
XRCC1P18887 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC18.92■□□□□ 0.62
XRCC1P18887 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
XRCC1P18887 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
XRCC1P18887 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
XRCC1P18887 AC079598.2-202ENST00000546624 1451 ntBASIC18.92■□□□□ 0.62
XRCC1P18887 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC18.92■□□□□ 0.62
XRCC1P18887 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
XRCC1P18887 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC18.92■□□□□ 0.62
XRCC1P18887 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC18.92■□□□□ 0.62
XRCC1P18887 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC18.92■□□□□ 0.62
XRCC1P18887 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
XRCC1P18887 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
XRCC1P18887 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
XRCC1P18887 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
XRCC1P18887 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
XRCC1P18887 MESTP1-201ENST00000404287 994 ntBASIC18.92■□□□□ 0.62
XRCC1P18887 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
XRCC1P18887 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
XRCC1P18887 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC18.92■□□□□ 0.62
XRCC1P18887 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
XRCC1P18887 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC18.92■□□□□ 0.62
XRCC1P18887 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
XRCC1P18887 LINC01023-201ENST00000606054 436 ntBASIC18.92■□□□□ 0.62
XRCC1P18887 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
XRCC1P18887 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
XRCC1P18887 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
XRCC1P18887 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
XRCC1P18887 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
XRCC1P18887 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
XRCC1P18887 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
XRCC1P18887 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
XRCC1P18887 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
XRCC1P18887 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
XRCC1P18887 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
XRCC1P18887 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
XRCC1P18887 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
XRCC1P18887 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
XRCC1P18887 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC18.91■□□□□ 0.62
XRCC1P18887 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
XRCC1P18887 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
XRCC1P18887 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.91■□□□□ 0.62
XRCC1P18887 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC18.91■□□□□ 0.62
XRCC1P18887 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
XRCC1P18887 B3GAT3P1-201ENST00000471720 806 ntBASIC18.91■□□□□ 0.62
XRCC1P18887 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC18.91■□□□□ 0.62
XRCC1P18887 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC18.91■□□□□ 0.62
XRCC1P18887 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms