Protein–RNA interactions for Protein: P17600

SYN1, Synapsin-1, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYN1P17600 PMS2P2-201ENST00000425039 1128 ntBASIC20.69■□□□□ 0.9
SYN1P17600 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SYN1P17600 KRT18P67-201ENST00000432816 1264 ntBASIC20.69■□□□□ 0.9
SYN1P17600 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SYN1P17600 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SYN1P17600 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC20.69■□□□□ 0.9
SYN1P17600 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SYN1P17600 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SYN1P17600 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC20.69■□□□□ 0.9
SYN1P17600 RPL13AP23-201ENST00000480739 586 ntBASIC20.69■□□□□ 0.9
SYN1P17600 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SYN1P17600 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC20.69■□□□□ 0.9
SYN1P17600 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC20.69■□□□□ 0.9
SYN1P17600 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC20.69■□□□□ 0.9
SYN1P17600 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC20.69■□□□□ 0.9
SYN1P17600 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
SYN1P17600 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC20.69■□□□□ 0.9
SYN1P17600 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
SYN1P17600 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
SYN1P17600 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SYN1P17600 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
SYN1P17600 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC20.68■□□□□ 0.9
SYN1P17600 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SYN1P17600 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SYN1P17600 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SYN1P17600 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
SYN1P17600 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC20.68■□□□□ 0.9
SYN1P17600 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
SYN1P17600 AP003733.1-201ENST00000491725 852 ntBASIC20.68■□□□□ 0.9
SYN1P17600 AC093909.1-201ENST00000504731 1122 ntBASIC20.68■□□□□ 0.9
SYN1P17600 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC20.68■□□□□ 0.9
SYN1P17600 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SYN1P17600 RPL18-209ENST00000550645 463 ntTSL 5 BASIC20.68■□□□□ 0.9
SYN1P17600 RPL18-214ENST00000552588 559 ntTSL 3 BASIC20.68■□□□□ 0.9
SYN1P17600 MIR3180-5-201ENST00000583743 153 ntBASIC20.68■□□□□ 0.9
SYN1P17600 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC20.68■□□□□ 0.9
SYN1P17600 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SYN1P17600 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
SYN1P17600 ANKRD18DP-204ENST00000455355 1975 ntBASIC20.68■□□□□ 0.9
SYN1P17600 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SYN1P17600 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
SYN1P17600 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
SYN1P17600 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC20.68■□□□□ 0.9
SYN1P17600 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SYN1P17600 NSUN5P1-202ENST00000421140 1535 ntBASIC20.68■□□□□ 0.9
SYN1P17600 NSUN5P2-203ENST00000457352 1529 ntBASIC20.68■□□□□ 0.9
SYN1P17600 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
SYN1P17600 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SYN1P17600 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SYN1P17600 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SYN1P17600 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC20.67■□□□□ 0.9
SYN1P17600 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SYN1P17600 AF186996.4-201ENST00000467186 377 ntBASIC20.67■□□□□ 0.9
SYN1P17600 PIN1-206ENST00000587625 878 ntTSL 2 BASIC20.67■□□□□ 0.9
SYN1P17600 AL049840.3-201ENST00000602669 611 ntBASIC20.67■□□□□ 0.9
SYN1P17600 AL390719.2-201ENST00000606993 987 ntBASIC20.67■□□□□ 0.9
SYN1P17600 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC20.67■□□□□ 0.9
SYN1P17600 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SYN1P17600 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
SYN1P17600 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
SYN1P17600 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
SYN1P17600 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SYN1P17600 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SYN1P17600 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SYN1P17600 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SYN1P17600 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SYN1P17600 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SYN1P17600 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC20.66■□□□□ 0.9
SYN1P17600 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SYN1P17600 MCCD1P1-208ENST00000445732 328 ntBASIC20.66■□□□□ 0.9
SYN1P17600 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC20.66■□□□□ 0.9
SYN1P17600 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC20.66■□□□□ 0.9
SYN1P17600 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SYN1P17600 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC20.66■□□□□ 0.9
SYN1P17600 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SYN1P17600 IGHV3OR16-7-201ENST00000604106 360 ntBASIC20.66■□□□□ 0.9
SYN1P17600 CCNC-219ENST00000627680 896 ntTSL 5 BASIC20.66■□□□□ 0.9
SYN1P17600 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC20.66■□□□□ 0.9
SYN1P17600 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
SYN1P17600 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
SYN1P17600 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SYN1P17600 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SYN1P17600 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SYN1P17600 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SYN1P17600 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SYN1P17600 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC20.65■□□□□ 0.9
SYN1P17600 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC20.65■□□□□ 0.9
SYN1P17600 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SYN1P17600 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC20.65■□□□□ 0.9
SYN1P17600 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC20.65■□□□□ 0.9
SYN1P17600 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC20.65■□□□□ 0.9
SYN1P17600 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
SYN1P17600 AC124864.1-201ENST00000623408 392 ntBASIC20.65■□□□□ 0.9
SYN1P17600 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC20.65■□□□□ 0.9
SYN1P17600 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC20.65■□□□□ 0.9
SYN1P17600 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
SYN1P17600 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SYN1P17600 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SYN1P17600 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SYN1P17600 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms