Protein–RNA interactions for Protein: P12035

KRT3, Keratin, type II cytoskeletal 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT3P12035 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
KRT3P12035 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
KRT3P12035 AC004951.3-201ENST00000418645 1148 ntBASIC20.03■□□□□ 0.8
KRT3P12035 AC091390.4-202ENST00000476426 537 ntBASIC20.03■□□□□ 0.8
KRT3P12035 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC20.03■□□□□ 0.8
KRT3P12035 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC20.03■□□□□ 0.8
KRT3P12035 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC20.03■□□□□ 0.8
KRT3P12035 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
KRT3P12035 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC20.03■□□□□ 0.8
KRT3P12035 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
KRT3P12035 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
KRT3P12035 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
KRT3P12035 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
KRT3P12035 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
KRT3P12035 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC20.03■□□□□ 0.8
KRT3P12035 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
KRT3P12035 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC20.03■□□□□ 0.8
KRT3P12035 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC20.03■□□□□ 0.8
KRT3P12035 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
KRT3P12035 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
KRT3P12035 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC20.02■□□□□ 0.8
KRT3P12035 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
KRT3P12035 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
KRT3P12035 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
KRT3P12035 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
KRT3P12035 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
KRT3P12035 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC20.02■□□□□ 0.8
KRT3P12035 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
KRT3P12035 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC20.02■□□□□ 0.8
KRT3P12035 RPS2P55-201ENST00000397318 883 ntBASIC20.02■□□□□ 0.8
KRT3P12035 FAM197Y1-201ENST00000421178 764 ntBASIC20.02■□□□□ 0.8
KRT3P12035 AC107956.1-201ENST00000494359 873 ntBASIC20.02■□□□□ 0.8
KRT3P12035 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
KRT3P12035 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
KRT3P12035 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC20.02■□□□□ 0.8
KRT3P12035 AC093503.3-201ENST00000624917 2352 ntBASIC20.02■□□□□ 0.8
KRT3P12035 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
KRT3P12035 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.79
KRT3P12035 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
KRT3P12035 KRT8P11-201ENST00000409686 1436 ntBASIC20.02■□□□□ 0.79
KRT3P12035 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC20.02■□□□□ 0.79
KRT3P12035 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
KRT3P12035 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
KRT3P12035 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
KRT3P12035 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
KRT3P12035 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC20.01■□□□□ 0.79
KRT3P12035 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC20.01■□□□□ 0.79
KRT3P12035 CD177P1-201ENST00000606252 935 ntBASIC20.01■□□□□ 0.79
KRT3P12035 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC20.01■□□□□ 0.79
KRT3P12035 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
KRT3P12035 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
KRT3P12035 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
KRT3P12035 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
KRT3P12035 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
KRT3P12035 MME-217ENST00000616757 1315 ntTSL 5 BASIC20.01■□□□□ 0.79
KRT3P12035 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC20■□□□□ 0.79
KRT3P12035 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
KRT3P12035 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC20■□□□□ 0.79
KRT3P12035 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
KRT3P12035 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
KRT3P12035 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC20■□□□□ 0.79
KRT3P12035 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
KRT3P12035 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
KRT3P12035 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
KRT3P12035 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
KRT3P12035 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC20■□□□□ 0.79
KRT3P12035 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC20■□□□□ 0.79
KRT3P12035 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC20■□□□□ 0.79
KRT3P12035 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC20■□□□□ 0.79
KRT3P12035 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC20■□□□□ 0.79
KRT3P12035 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC20■□□□□ 0.79
KRT3P12035 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC20■□□□□ 0.79
KRT3P12035 AC011298.2-201ENST00000617989 482 ntBASIC20■□□□□ 0.79
KRT3P12035 AC130371.2-201ENST00000619443 611 ntBASIC20■□□□□ 0.79
KRT3P12035 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC20■□□□□ 0.79
KRT3P12035 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
KRT3P12035 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
KRT3P12035 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC20■□□□□ 0.79
KRT3P12035 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
KRT3P12035 SRI-203ENST00000419179 1307 ntTSL 2 BASIC20■□□□□ 0.79
KRT3P12035 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
KRT3P12035 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
KRT3P12035 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
KRT3P12035 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
KRT3P12035 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
KRT3P12035 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
KRT3P12035 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
KRT3P12035 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
KRT3P12035 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC19.99■□□□□ 0.79
KRT3P12035 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC19.99■□□□□ 0.79
KRT3P12035 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
KRT3P12035 AC011506.1-201ENST00000474329 610 ntBASIC19.99■□□□□ 0.79
KRT3P12035 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
KRT3P12035 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
KRT3P12035 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC19.99■□□□□ 0.79
KRT3P12035 AC233702.5-201ENST00000584107 538 ntBASIC19.99■□□□□ 0.79
KRT3P12035 AP001412.1-201ENST00000608405 714 ntBASIC19.99■□□□□ 0.79
KRT3P12035 MIR6786-201ENST00000616843 113 ntBASIC19.99■□□□□ 0.79
KRT3P12035 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
KRT3P12035 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms