Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC28.53■■■□□ 2.16
RAPGEF3O95398 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC28.53■■■□□ 2.16
RAPGEF3O95398 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC28.53■■■□□ 2.16
RAPGEF3O95398 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
RAPGEF3O95398 AP005212.1-201ENST00000581547 1997 ntBASIC28.53■■■□□ 2.16
RAPGEF3O95398 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
RAPGEF3O95398 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC28.53■■■□□ 2.16
RAPGEF3O95398 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
RAPGEF3O95398 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC28.52■■■□□ 2.16
RAPGEF3O95398 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
RAPGEF3O95398 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC28.52■■■□□ 2.16
RAPGEF3O95398 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
RAPGEF3O95398 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
RAPGEF3O95398 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC28.52■■■□□ 2.16
RAPGEF3O95398 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC28.52■■■□□ 2.16
RAPGEF3O95398 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC28.52■■■□□ 2.16
RAPGEF3O95398 CDV3-207ENST00000508481 661 ntTSL 3 BASIC28.52■■■□□ 2.16
RAPGEF3O95398 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC28.52■■■□□ 2.16
RAPGEF3O95398 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
RAPGEF3O95398 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC28.52■■■□□ 2.16
RAPGEF3O95398 MIR7706-201ENST00000613747 67 ntBASIC28.52■■■□□ 2.16
RAPGEF3O95398 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC28.52■■■□□ 2.16
RAPGEF3O95398 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC28.52■■■□□ 2.16
RAPGEF3O95398 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
RAPGEF3O95398 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
RAPGEF3O95398 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC28.51■■■□□ 2.15
RAPGEF3O95398 EMD-201ENST00000369835 966 ntTSL 3 BASIC28.51■■■□□ 2.15
RAPGEF3O95398 MIR564-202ENST00000385049 94 ntBASIC28.51■■■□□ 2.15
RAPGEF3O95398 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC28.51■■■□□ 2.15
RAPGEF3O95398 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC28.51■■■□□ 2.15
RAPGEF3O95398 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC28.51■■■□□ 2.15
RAPGEF3O95398 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC28.51■■■□□ 2.15
RAPGEF3O95398 AC124864.1-201ENST00000623408 392 ntBASIC28.51■■■□□ 2.15
RAPGEF3O95398 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC28.51■■■□□ 2.15
RAPGEF3O95398 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC28.51■■■□□ 2.15
RAPGEF3O95398 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
RAPGEF3O95398 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC28.51■■■□□ 2.15
RAPGEF3O95398 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
RAPGEF3O95398 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
RAPGEF3O95398 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC28.5■■■□□ 2.15
RAPGEF3O95398 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC28.5■■■□□ 2.15
RAPGEF3O95398 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC28.5■■■□□ 2.15
RAPGEF3O95398 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
RAPGEF3O95398 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC28.5■■■□□ 2.15
RAPGEF3O95398 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC28.5■■■□□ 2.15
RAPGEF3O95398 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC28.5■■■□□ 2.15
RAPGEF3O95398 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC28.5■■■□□ 2.15
RAPGEF3O95398 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
RAPGEF3O95398 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC28.5■■■□□ 2.15
RAPGEF3O95398 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC28.5■■■□□ 2.15
RAPGEF3O95398 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC28.5■■■□□ 2.15
RAPGEF3O95398 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC28.49■■■□□ 2.15
RAPGEF3O95398 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC28.49■■■□□ 2.15
RAPGEF3O95398 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC28.49■■■□□ 2.15
RAPGEF3O95398 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
RAPGEF3O95398 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC28.49■■■□□ 2.15
RAPGEF3O95398 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC28.49■■■□□ 2.15
RAPGEF3O95398 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
RAPGEF3O95398 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC28.49■■■□□ 2.15
RAPGEF3O95398 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC28.49■■■□□ 2.15
RAPGEF3O95398 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
RAPGEF3O95398 AC009237.14-201ENST00000609975 1594 ntBASIC28.49■■■□□ 2.15
RAPGEF3O95398 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC28.49■■■□□ 2.15
RAPGEF3O95398 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
RAPGEF3O95398 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC28.49■■■□□ 2.15
RAPGEF3O95398 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
RAPGEF3O95398 AL691432.2-201ENST00000607222 2038 ntBASIC28.48■■■□□ 2.15
RAPGEF3O95398 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC28.48■■■□□ 2.15
RAPGEF3O95398 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC28.48■■■□□ 2.15
RAPGEF3O95398 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
RAPGEF3O95398 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
RAPGEF3O95398 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
RAPGEF3O95398 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC28.48■■■□□ 2.15
RAPGEF3O95398 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
RAPGEF3O95398 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC28.48■■■□□ 2.15
RAPGEF3O95398 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC28.48■■■□□ 2.15
RAPGEF3O95398 AF186996.4-201ENST00000467186 377 ntBASIC28.48■■■□□ 2.15
RAPGEF3O95398 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC28.48■■■□□ 2.15
RAPGEF3O95398 PGAM5P1-201ENST00000518923 814 ntBASIC28.48■■■□□ 2.15
RAPGEF3O95398 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC28.48■■■□□ 2.15
RAPGEF3O95398 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC28.48■■■□□ 2.15
RAPGEF3O95398 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC28.48■■■□□ 2.15
RAPGEF3O95398 GPR32P1-201ENST00000601788 811 ntBASIC28.48■■■□□ 2.15
RAPGEF3O95398 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
RAPGEF3O95398 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC28.48■■■□□ 2.15
RAPGEF3O95398 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC28.48■■■□□ 2.15
RAPGEF3O95398 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC28.48■■■□□ 2.15
RAPGEF3O95398 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
RAPGEF3O95398 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC28.47■■■□□ 2.15
RAPGEF3O95398 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
RAPGEF3O95398 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC28.47■■■□□ 2.15
RAPGEF3O95398 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
RAPGEF3O95398 AC018712.1-201ENST00000455767 687 ntBASIC28.47■■■□□ 2.15
RAPGEF3O95398 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC28.47■■■□□ 2.15
RAPGEF3O95398 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC28.47■■■□□ 2.15
RAPGEF3O95398 AC010240.3-201ENST00000607688 395 ntBASIC28.47■■■□□ 2.15
RAPGEF3O95398 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
RAPGEF3O95398 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC28.47■■■□□ 2.15
RAPGEF3O95398 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC28.47■■■□□ 2.15
RAPGEF3O95398 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC28.47■■■□□ 2.15
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms