Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC16.59■□□□□ 0.25
UPK1BO75841 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC16.59■□□□□ 0.25
UPK1BO75841 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
UPK1BO75841 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC16.59■□□□□ 0.25
UPK1BO75841 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC16.59■□□□□ 0.25
UPK1BO75841 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
UPK1BO75841 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
UPK1BO75841 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
UPK1BO75841 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC16.59■□□□□ 0.25
UPK1BO75841 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
UPK1BO75841 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
UPK1BO75841 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.59■□□□□ 0.25
UPK1BO75841 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
UPK1BO75841 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
UPK1BO75841 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
UPK1BO75841 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
UPK1BO75841 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
UPK1BO75841 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC16.58■□□□□ 0.25
UPK1BO75841 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
UPK1BO75841 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
UPK1BO75841 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
UPK1BO75841 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC16.58■□□□□ 0.25
UPK1BO75841 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
UPK1BO75841 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
UPK1BO75841 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
UPK1BO75841 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
UPK1BO75841 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
UPK1BO75841 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC16.58■□□□□ 0.24
UPK1BO75841 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
UPK1BO75841 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
UPK1BO75841 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
UPK1BO75841 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
UPK1BO75841 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
UPK1BO75841 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
UPK1BO75841 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC16.58■□□□□ 0.24
UPK1BO75841 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
UPK1BO75841 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
UPK1BO75841 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC16.58■□□□□ 0.24
UPK1BO75841 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC16.58■□□□□ 0.24
UPK1BO75841 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC16.58■□□□□ 0.24
UPK1BO75841 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC16.58■□□□□ 0.24
UPK1BO75841 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC16.58■□□□□ 0.24
UPK1BO75841 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
UPK1BO75841 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
UPK1BO75841 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
UPK1BO75841 CICP6-201ENST00000457191 2729 ntBASIC16.58■□□□□ 0.24
UPK1BO75841 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
UPK1BO75841 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
UPK1BO75841 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
UPK1BO75841 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
UPK1BO75841 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
UPK1BO75841 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
UPK1BO75841 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
UPK1BO75841 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
UPK1BO75841 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC16.57■□□□□ 0.24
UPK1BO75841 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
UPK1BO75841 UBQLN4P1-201ENST00000461599 1801 ntBASIC16.57■□□□□ 0.24
UPK1BO75841 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
UPK1BO75841 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC16.57■□□□□ 0.24
UPK1BO75841 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
UPK1BO75841 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
UPK1BO75841 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
UPK1BO75841 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC16.57■□□□□ 0.24
UPK1BO75841 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
UPK1BO75841 AC011298.3-201ENST00000615796 283 ntBASIC16.57■□□□□ 0.24
UPK1BO75841 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
UPK1BO75841 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
UPK1BO75841 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
UPK1BO75841 SNAI3-AS1-205ENST00000568633 2096 ntBASIC16.57■□□□□ 0.24
UPK1BO75841 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
UPK1BO75841 AC138028.4-201ENST00000564984 1845 ntBASIC16.56■□□□□ 0.24
UPK1BO75841 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
UPK1BO75841 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC16.56■□□□□ 0.24
UPK1BO75841 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
UPK1BO75841 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
UPK1BO75841 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
UPK1BO75841 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
UPK1BO75841 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
UPK1BO75841 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
UPK1BO75841 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC16.56■□□□□ 0.24
UPK1BO75841 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
UPK1BO75841 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC16.56■□□□□ 0.24
UPK1BO75841 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC16.56■□□□□ 0.24
UPK1BO75841 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC16.56■□□□□ 0.24
UPK1BO75841 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
UPK1BO75841 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
UPK1BO75841 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC16.56■□□□□ 0.24
UPK1BO75841 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
UPK1BO75841 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC16.56■□□□□ 0.24
UPK1BO75841 AC091799.1-201ENST00000422823 811 ntBASIC16.56■□□□□ 0.24
UPK1BO75841 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC16.56■□□□□ 0.24
UPK1BO75841 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC16.56■□□□□ 0.24
UPK1BO75841 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
UPK1BO75841 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
UPK1BO75841 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
UPK1BO75841 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
UPK1BO75841 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
UPK1BO75841 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
UPK1BO75841 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
UPK1BO75841 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms