Protein–RNA interactions for Protein: O43900

PRICKLE3, Prickle planar cell polarity protein 3, humanhuman

Predicted RBP Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE3O43900 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
PRICKLE3O43900 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PRICKLE3O43900 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PRICKLE3O43900 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PRICKLE3O43900 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC18.25■□□□□ 0.51
PRICKLE3O43900 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PRICKLE3O43900 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
PRICKLE3O43900 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
PRICKLE3O43900 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PRICKLE3O43900 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC18.25■□□□□ 0.51
PRICKLE3O43900 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC18.25■□□□□ 0.51
PRICKLE3O43900 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC18.25■□□□□ 0.51
PRICKLE3O43900 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
PRICKLE3O43900 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC18.25■□□□□ 0.51
PRICKLE3O43900 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PRICKLE3O43900 CCR12P-201ENST00000446203 998 ntBASIC18.25■□□□□ 0.51
PRICKLE3O43900 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC18.25■□□□□ 0.51
PRICKLE3O43900 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC18.25■□□□□ 0.51
PRICKLE3O43900 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC18.25■□□□□ 0.51
PRICKLE3O43900 DUT-205ENST00000558813 769 ntTSL 2 BASIC18.25■□□□□ 0.51
PRICKLE3O43900 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC18.25■□□□□ 0.51
PRICKLE3O43900 AC010653.2-201ENST00000623505 997 ntBASIC18.25■□□□□ 0.51
PRICKLE3O43900 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PRICKLE3O43900 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
PRICKLE3O43900 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC18.25■□□□□ 0.51
PRICKLE3O43900 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PRICKLE3O43900 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
PRICKLE3O43900 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC18.25■□□□□ 0.51
PRICKLE3O43900 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC18.25■□□□□ 0.51
PRICKLE3O43900 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PRICKLE3O43900 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PRICKLE3O43900 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PRICKLE3O43900 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
PRICKLE3O43900 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PRICKLE3O43900 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
PRICKLE3O43900 KRT18P22-201ENST00000402024 1347 ntBASIC18.24■□□□□ 0.51
PRICKLE3O43900 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PRICKLE3O43900 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
PRICKLE3O43900 AL049812.1-201ENST00000432563 2267 ntBASIC18.24■□□□□ 0.51
PRICKLE3O43900 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PRICKLE3O43900 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PRICKLE3O43900 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PRICKLE3O43900 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PRICKLE3O43900 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PRICKLE3O43900 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PRICKLE3O43900 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC18.24■□□□□ 0.51
PRICKLE3O43900 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC18.24■□□□□ 0.51
PRICKLE3O43900 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
PRICKLE3O43900 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC18.24■□□□□ 0.51
PRICKLE3O43900 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC18.24■□□□□ 0.51
PRICKLE3O43900 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC18.24■□□□□ 0.51
PRICKLE3O43900 LINC01023-201ENST00000606054 436 ntBASIC18.24■□□□□ 0.51
PRICKLE3O43900 FAM87A-204ENST00000613235 858 ntBASIC18.24■□□□□ 0.51
PRICKLE3O43900 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PRICKLE3O43900 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PRICKLE3O43900 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PRICKLE3O43900 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PRICKLE3O43900 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PRICKLE3O43900 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PRICKLE3O43900 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PRICKLE3O43900 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PRICKLE3O43900 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PRICKLE3O43900 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PRICKLE3O43900 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PRICKLE3O43900 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC18.23■□□□□ 0.51
PRICKLE3O43900 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PRICKLE3O43900 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC18.23■□□□□ 0.51
PRICKLE3O43900 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC18.23■□□□□ 0.51
PRICKLE3O43900 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PRICKLE3O43900 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC18.23■□□□□ 0.51
PRICKLE3O43900 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
PRICKLE3O43900 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC18.23■□□□□ 0.51
PRICKLE3O43900 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC18.23■□□□□ 0.51
PRICKLE3O43900 ECEL1P2-202ENST00000465689 757 ntBASIC18.23■□□□□ 0.51
PRICKLE3O43900 AC128688.1-201ENST00000487626 519 ntBASIC18.23■□□□□ 0.51
PRICKLE3O43900 AP003041.3-201ENST00000527151 707 ntBASIC18.23■□□□□ 0.51
PRICKLE3O43900 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC18.23■□□□□ 0.51
PRICKLE3O43900 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
PRICKLE3O43900 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC18.23■□□□□ 0.51
PRICKLE3O43900 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC18.23■□□□□ 0.51
PRICKLE3O43900 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PRICKLE3O43900 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
PRICKLE3O43900 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PRICKLE3O43900 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC18.23■□□□□ 0.51
PRICKLE3O43900 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC18.22■□□□□ 0.51
PRICKLE3O43900 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC18.22■□□□□ 0.51
PRICKLE3O43900 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC18.22■□□□□ 0.51
PRICKLE3O43900 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC18.22■□□□□ 0.51
PRICKLE3O43900 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC18.22■□□□□ 0.51
PRICKLE3O43900 BUB3-202ENST00000368859 667 ntTSL 3 BASIC18.22■□□□□ 0.51
PRICKLE3O43900 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC18.22■□□□□ 0.51
PRICKLE3O43900 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
PRICKLE3O43900 TMA16-209ENST00000513272 803 ntTSL 2 BASIC18.22■□□□□ 0.51
PRICKLE3O43900 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC18.22■□□□□ 0.51
PRICKLE3O43900 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC18.22■□□□□ 0.51
PRICKLE3O43900 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
PRICKLE3O43900 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
PRICKLE3O43900 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
PRICKLE3O43900 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PRICKLE3O43900 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms