Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC22.7■■□□□ 1.22
FOXN1O15353 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC22.7■■□□□ 1.22
FOXN1O15353 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC22.7■■□□□ 1.22
FOXN1O15353 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
FOXN1O15353 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC22.7■■□□□ 1.22
FOXN1O15353 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
FOXN1O15353 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
FOXN1O15353 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC22.7■■□□□ 1.22
FOXN1O15353 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC22.7■■□□□ 1.22
FOXN1O15353 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
FOXN1O15353 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
FOXN1O15353 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC22.69■■□□□ 1.22
FOXN1O15353 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
FOXN1O15353 LBX2-AS1-202ENST00000603175 2083 ntBASIC22.69■■□□□ 1.22
FOXN1O15353 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
FOXN1O15353 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC22.69■■□□□ 1.22
FOXN1O15353 H19-201ENST00000411754 1788 ntTSL 5 BASIC22.69■■□□□ 1.22
FOXN1O15353 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
FOXN1O15353 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC22.69■■□□□ 1.22
FOXN1O15353 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC22.69■■□□□ 1.22
FOXN1O15353 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC22.69■■□□□ 1.22
FOXN1O15353 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC22.69■■□□□ 1.22
FOXN1O15353 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
FOXN1O15353 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC22.69■■□□□ 1.22
FOXN1O15353 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
FOXN1O15353 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
FOXN1O15353 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC22.69■■□□□ 1.22
FOXN1O15353 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC22.69■■□□□ 1.22
FOXN1O15353 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC22.69■■□□□ 1.22
FOXN1O15353 AL121672.3-201ENST00000608644 468 ntBASIC22.69■■□□□ 1.22
FOXN1O15353 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC22.69■■□□□ 1.22
FOXN1O15353 AL691432.2-201ENST00000607222 2038 ntBASIC22.69■■□□□ 1.22
FOXN1O15353 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC22.68■■□□□ 1.22
FOXN1O15353 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC22.68■■□□□ 1.22
FOXN1O15353 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
FOXN1O15353 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
FOXN1O15353 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC22.68■■□□□ 1.22
FOXN1O15353 BX119927.1-201ENST00000636596 1552 ntBASIC22.68■■□□□ 1.22
FOXN1O15353 AP006587.1-201ENST00000534129 1502 ntBASIC22.68■■□□□ 1.22
FOXN1O15353 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC22.68■■□□□ 1.22
FOXN1O15353 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
FOXN1O15353 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
FOXN1O15353 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC22.68■■□□□ 1.22
FOXN1O15353 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC22.68■■□□□ 1.22
FOXN1O15353 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC22.68■■□□□ 1.22
FOXN1O15353 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
FOXN1O15353 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
FOXN1O15353 GGCT-205ENST00000409436 954 ntTSL 3 BASIC22.68■■□□□ 1.22
FOXN1O15353 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC22.68■■□□□ 1.22
FOXN1O15353 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
FOXN1O15353 BX276092.5-203ENST00000456199 560 ntBASIC22.68■■□□□ 1.22
FOXN1O15353 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC22.68■■□□□ 1.22
FOXN1O15353 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
FOXN1O15353 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC22.68■■□□□ 1.22
FOXN1O15353 GCSHP2-201ENST00000560971 527 ntBASIC22.68■■□□□ 1.22
FOXN1O15353 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC22.68■■□□□ 1.22
FOXN1O15353 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC22.68■■□□□ 1.22
FOXN1O15353 AP002414.4-201ENST00000589764 1148 ntBASIC22.68■■□□□ 1.22
FOXN1O15353 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC22.68■■□□□ 1.22
FOXN1O15353 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
FOXN1O15353 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
FOXN1O15353 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC22.68■■□□□ 1.22
FOXN1O15353 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
FOXN1O15353 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC22.67■■□□□ 1.22
FOXN1O15353 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC22.67■■□□□ 1.22
FOXN1O15353 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
FOXN1O15353 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC22.67■■□□□ 1.22
FOXN1O15353 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC22.67■■□□□ 1.22
FOXN1O15353 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
FOXN1O15353 TSPY12P-201ENST00000421279 868 ntBASIC22.67■■□□□ 1.22
FOXN1O15353 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC22.67■■□□□ 1.22
FOXN1O15353 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC22.67■■□□□ 1.22
FOXN1O15353 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
FOXN1O15353 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
FOXN1O15353 AC007952.6-201ENST00000573168 2673 ntBASIC22.67■■□□□ 1.22
FOXN1O15353 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC22.67■■□□□ 1.22
FOXN1O15353 AC003957.1-201ENST00000625108 2673 ntBASIC22.67■■□□□ 1.22
FOXN1O15353 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
FOXN1O15353 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC22.67■■□□□ 1.22
FOXN1O15353 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
FOXN1O15353 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
FOXN1O15353 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC22.67■■□□□ 1.22
FOXN1O15353 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC22.66■■□□□ 1.22
FOXN1O15353 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
FOXN1O15353 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
FOXN1O15353 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC22.66■■□□□ 1.22
FOXN1O15353 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC22.66■■□□□ 1.22
FOXN1O15353 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
FOXN1O15353 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
FOXN1O15353 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
FOXN1O15353 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
FOXN1O15353 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
FOXN1O15353 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
FOXN1O15353 AP000523.1-201ENST00000398242 1049 ntBASIC22.66■■□□□ 1.22
FOXN1O15353 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC22.66■■□□□ 1.22
FOXN1O15353 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
FOXN1O15353 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC22.66■■□□□ 1.22
FOXN1O15353 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC22.66■■□□□ 1.22
FOXN1O15353 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
FOXN1O15353 AL121772.3-201ENST00000610840 674 ntBASIC22.66■■□□□ 1.22
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms