Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RCCD1A6NED2 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RCCD1A6NED2 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
RCCD1A6NED2 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC20.23■□□□□ 0.83
RCCD1A6NED2 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC20.23■□□□□ 0.83
RCCD1A6NED2 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RCCD1A6NED2 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC20.22■□□□□ 0.83
RCCD1A6NED2 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
RCCD1A6NED2 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RCCD1A6NED2 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RCCD1A6NED2 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC20.22■□□□□ 0.83
RCCD1A6NED2 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
RCCD1A6NED2 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RCCD1A6NED2 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RCCD1A6NED2 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
RCCD1A6NED2 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RCCD1A6NED2 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RCCD1A6NED2 AP000997.3-201ENST00000623333 2250 ntBASIC20.22■□□□□ 0.83
RCCD1A6NED2 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC20.22■□□□□ 0.83
RCCD1A6NED2 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC20.22■□□□□ 0.83
RCCD1A6NED2 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
RCCD1A6NED2 RGMA-211ENST00000557420 989 ntTSL 3 BASIC20.22■□□□□ 0.83
RCCD1A6NED2 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC20.22■□□□□ 0.83
RCCD1A6NED2 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
RCCD1A6NED2 MIR4758-201ENST00000577688 71 ntBASIC20.22■□□□□ 0.83
RCCD1A6NED2 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC20.22■□□□□ 0.83
RCCD1A6NED2 HLA-A-209ENST00000638375 975 ntBASIC20.22■□□□□ 0.83
RCCD1A6NED2 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
RCCD1A6NED2 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
RCCD1A6NED2 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
RCCD1A6NED2 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC20.22■□□□□ 0.83
RCCD1A6NED2 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RCCD1A6NED2 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
RCCD1A6NED2 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC20.21■□□□□ 0.83
RCCD1A6NED2 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
RCCD1A6NED2 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC20.21■□□□□ 0.83
RCCD1A6NED2 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC20.21■□□□□ 0.83
RCCD1A6NED2 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RCCD1A6NED2 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RCCD1A6NED2 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RCCD1A6NED2 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RCCD1A6NED2 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RCCD1A6NED2 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC20.21■□□□□ 0.83
RCCD1A6NED2 AL138781.1-201ENST00000566567 1274 ntBASIC20.21■□□□□ 0.83
RCCD1A6NED2 AC008687.6-201ENST00000596318 630 ntBASIC20.21■□□□□ 0.83
RCCD1A6NED2 Six3os1_6.1-201ENST00000620790 196 ntBASIC20.21■□□□□ 0.83
RCCD1A6NED2 GAMT-205ENST00000640762 751 ntTSL 5 BASIC20.21■□□□□ 0.83
RCCD1A6NED2 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC20.21■□□□□ 0.83
RCCD1A6NED2 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
RCCD1A6NED2 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC20.21■□□□□ 0.83
RCCD1A6NED2 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC20.21■□□□□ 0.83
RCCD1A6NED2 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
RCCD1A6NED2 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RCCD1A6NED2 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RCCD1A6NED2 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.83
RCCD1A6NED2 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RCCD1A6NED2 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
RCCD1A6NED2 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC20.2■□□□□ 0.82
RCCD1A6NED2 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RCCD1A6NED2 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC20.2■□□□□ 0.82
RCCD1A6NED2 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RCCD1A6NED2 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC20.2■□□□□ 0.82
RCCD1A6NED2 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
RCCD1A6NED2 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
RCCD1A6NED2 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RCCD1A6NED2 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
RCCD1A6NED2 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RCCD1A6NED2 SLC29A4P1-201ENST00000398760 971 ntBASIC20.2■□□□□ 0.82
RCCD1A6NED2 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC20.2■□□□□ 0.82
RCCD1A6NED2 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC20.2■□□□□ 0.82
RCCD1A6NED2 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC20.2■□□□□ 0.82
RCCD1A6NED2 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC20.2■□□□□ 0.82
RCCD1A6NED2 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
RCCD1A6NED2 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RCCD1A6NED2 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
RCCD1A6NED2 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RCCD1A6NED2 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RCCD1A6NED2 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
RCCD1A6NED2 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RCCD1A6NED2 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RCCD1A6NED2 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC20.19■□□□□ 0.82
RCCD1A6NED2 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
RCCD1A6NED2 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RCCD1A6NED2 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RCCD1A6NED2 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RCCD1A6NED2 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
RCCD1A6NED2 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RCCD1A6NED2 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
RCCD1A6NED2 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
RCCD1A6NED2 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RCCD1A6NED2 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC20.19■□□□□ 0.82
RCCD1A6NED2 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RCCD1A6NED2 TSPY21P-201ENST00000433481 731 ntBASIC20.19■□□□□ 0.82
RCCD1A6NED2 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC20.19■□□□□ 0.82
RCCD1A6NED2 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC20.19■□□□□ 0.82
RCCD1A6NED2 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC20.19■□□□□ 0.82
RCCD1A6NED2 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC20.19■□□□□ 0.82
RCCD1A6NED2 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RCCD1A6NED2 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC20.19■□□□□ 0.82
RCCD1A6NED2 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms