Protein–RNA interactions for Protein: A0A0B4J234

TRAV2, T-cell receptor alpha variable 2 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV2A0A0B4J234 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV2A0A0B4J234 AL032819.2-201ENST00000624543 2162 ntBASIC14.39□□□□□ -0.11
TRAV2A0A0B4J234 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV2A0A0B4J234 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV2A0A0B4J234 FSCN1P1-201ENST00000568912 1481 ntBASIC14.38□□□□□ -0.11
TRAV2A0A0B4J234 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC14.38□□□□□ -0.11
TRAV2A0A0B4J234 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
TRAV2A0A0B4J234 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC14.38□□□□□ -0.11
TRAV2A0A0B4J234 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV2A0A0B4J234 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV2A0A0B4J234 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV2A0A0B4J234 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV2A0A0B4J234 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
TRAV2A0A0B4J234 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV2A0A0B4J234 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV2A0A0B4J234 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV2A0A0B4J234 SDHAP1-207ENST00000440850 2000 ntBASIC14.38□□□□□ -0.11
TRAV2A0A0B4J234 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
TRAV2A0A0B4J234 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV2A0A0B4J234 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV2A0A0B4J234 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV2A0A0B4J234 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
TRAV2A0A0B4J234 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
TRAV2A0A0B4J234 DERL1-203ENST00000419562 918 ntTSL 2 BASIC14.38□□□□□ -0.11
TRAV2A0A0B4J234 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV2A0A0B4J234 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC14.38□□□□□ -0.11
TRAV2A0A0B4J234 USP36-216ENST00000589424 970 ntTSL 5 BASIC14.38□□□□□ -0.11
TRAV2A0A0B4J234 CD177P1-201ENST00000606252 935 ntBASIC14.38□□□□□ -0.11
TRAV2A0A0B4J234 CR392000.1-201ENST00000624770 1228 ntBASIC14.38□□□□□ -0.11
TRAV2A0A0B4J234 AL049637.2-201ENST00000641778 930 ntBASIC14.38□□□□□ -0.11
TRAV2A0A0B4J234 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC14.38□□□□□ -0.11
TRAV2A0A0B4J234 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC14.38□□□□□ -0.11
TRAV2A0A0B4J234 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV2A0A0B4J234 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC14.38□□□□□ -0.11
TRAV2A0A0B4J234 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC14.38□□□□□ -0.11
TRAV2A0A0B4J234 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV2A0A0B4J234 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV2A0A0B4J234 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV2A0A0B4J234 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV2A0A0B4J234 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV2A0A0B4J234 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
TRAV2A0A0B4J234 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC14.38□□□□□ -0.11
TRAV2A0A0B4J234 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
TRAV2A0A0B4J234 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV2A0A0B4J234 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV2A0A0B4J234 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV2A0A0B4J234 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV2A0A0B4J234 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV2A0A0B4J234 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
TRAV2A0A0B4J234 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
TRAV2A0A0B4J234 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV2A0A0B4J234 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV2A0A0B4J234 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV2A0A0B4J234 KRT8P41-201ENST00000533985 1514 ntBASIC14.37□□□□□ -0.11
TRAV2A0A0B4J234 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV2A0A0B4J234 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
TRAV2A0A0B4J234 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV2A0A0B4J234 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV2A0A0B4J234 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
TRAV2A0A0B4J234 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV2A0A0B4J234 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV2A0A0B4J234 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
TRAV2A0A0B4J234 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV2A0A0B4J234 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC14.37□□□□□ -0.11
TRAV2A0A0B4J234 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC14.37□□□□□ -0.11
TRAV2A0A0B4J234 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV2A0A0B4J234 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC14.37□□□□□ -0.11
TRAV2A0A0B4J234 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC14.37□□□□□ -0.11
TRAV2A0A0B4J234 DGCR10-201ENST00000609839 495 ntBASIC14.37□□□□□ -0.11
TRAV2A0A0B4J234 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC14.37□□□□□ -0.11
TRAV2A0A0B4J234 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV2A0A0B4J234 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV2A0A0B4J234 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV2A0A0B4J234 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV2A0A0B4J234 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV2A0A0B4J234 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV2A0A0B4J234 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC14.37□□□□□ -0.11
TRAV2A0A0B4J234 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV2A0A0B4J234 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV2A0A0B4J234 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC14.37□□□□□ -0.11
TRAV2A0A0B4J234 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV2A0A0B4J234 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
TRAV2A0A0B4J234 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV2A0A0B4J234 AC120498.9-201ENST00000339021 3867 ntBASIC14.37□□□□□ -0.11
TRAV2A0A0B4J234 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC14.36□□□□□ -0.11
TRAV2A0A0B4J234 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV2A0A0B4J234 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC14.36□□□□□ -0.11
TRAV2A0A0B4J234 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
TRAV2A0A0B4J234 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV2A0A0B4J234 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV2A0A0B4J234 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
TRAV2A0A0B4J234 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
TRAV2A0A0B4J234 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV2A0A0B4J234 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV2A0A0B4J234 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
TRAV2A0A0B4J234 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV2A0A0B4J234 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV2A0A0B4J234 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC14.36□□□□□ -0.11
TRAV2A0A0B4J234 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV2A0A0B4J234 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms