Protein–RNA interactions for Protein: Q9Y6Q1

CAPN6, Calpain-6, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN6Q9Y6Q1 RNU6-968P-201ENST00000384076 107 ntBASIC4.09□□□□□ -1.75
CAPN6Q9Y6Q1 RNU6-72P-201ENST00000384285 79 ntBASIC4.09□□□□□ -1.75
CAPN6Q9Y6Q1 SNORA53-201ENST00000391141 249 ntBASIC4.09□□□□□ -1.75
CAPN6Q9Y6Q1 AP000907.1-201ENST00000428428 510 ntBASIC4.09□□□□□ -1.75
CAPN6Q9Y6Q1 AC009296.1-201ENST00000443146 155 ntBASIC4.09□□□□□ -1.75
CAPN6Q9Y6Q1 HSPE1P25-201ENST00000455484 251 ntBASIC4.09□□□□□ -1.75
CAPN6Q9Y6Q1 RAC1P2-201ENST00000511164 579 ntBASIC4.09□□□□□ -1.75
CAPN6Q9Y6Q1 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CAPN6Q9Y6Q1 AC087441.2-201ENST00000529141 262 ntBASIC4.09□□□□□ -1.75
CAPN6Q9Y6Q1 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC4.09□□□□□ -1.75
CAPN6Q9Y6Q1 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.09□□□□□ -1.75
CAPN6Q9Y6Q1 Z83818.1-201ENST00000603584 150 ntBASIC4.09□□□□□ -1.75
CAPN6Q9Y6Q1 CCT7-217ENST00000626868 249 ntTSL 5 BASIC4.09□□□□□ -1.75
CAPN6Q9Y6Q1 AC132825.6-201ENST00000638861 357 ntBASIC4.09□□□□□ -1.75
CAPN6Q9Y6Q1 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.09□□□□□ -1.75
CAPN6Q9Y6Q1 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.76
CAPN6Q9Y6Q1 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
CAPN6Q9Y6Q1 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.08□□□□□ -1.76
CAPN6Q9Y6Q1 AC022893.2-201ENST00000564832 3296 ntBASIC4.08□□□□□ -1.76
CAPN6Q9Y6Q1 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
CAPN6Q9Y6Q1 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
CAPN6Q9Y6Q1 RNU6-105P-201ENST00000363909 104 ntBASIC4.08□□□□□ -1.76
CAPN6Q9Y6Q1 RNU6-17P-201ENST00000384245 107 ntBASIC4.08□□□□□ -1.76
CAPN6Q9Y6Q1 SNORD63-201ENST00000384262 68 ntBASIC4.08□□□□□ -1.76
CAPN6Q9Y6Q1 Y_RNA.506-201ENST00000384494 102 ntBASIC4.08□□□□□ -1.76
CAPN6Q9Y6Q1 RNU6-18P-201ENST00000384527 107 ntBASIC4.08□□□□□ -1.76
CAPN6Q9Y6Q1 MIR199A2-201ENST00000385289 110 ntBASIC4.08□□□□□ -1.76
CAPN6Q9Y6Q1 RNU6-493P-201ENST00000391321 108 ntBASIC4.08□□□□□ -1.76
CAPN6Q9Y6Q1 COX6CP10-201ENST00000416832 224 ntBASIC4.08□□□□□ -1.76
CAPN6Q9Y6Q1 DNAJC19P7-201ENST00000428811 344 ntBASIC4.08□□□□□ -1.76
CAPN6Q9Y6Q1 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC4.08□□□□□ -1.76
CAPN6Q9Y6Q1 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC4.08□□□□□ -1.76
CAPN6Q9Y6Q1 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.08□□□□□ -1.76
CAPN6Q9Y6Q1 RPS23P1-201ENST00000491662 432 ntBASIC4.08□□□□□ -1.76
CAPN6Q9Y6Q1 MRPS36P4-201ENST00000534436 298 ntBASIC4.08□□□□□ -1.76
CAPN6Q9Y6Q1 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC4.08□□□□□ -1.76
CAPN6Q9Y6Q1 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC4.08□□□□□ -1.76
CAPN6Q9Y6Q1 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.08□□□□□ -1.76
CAPN6Q9Y6Q1 AC010928.2-201ENST00000588017 287 ntBASIC4.08□□□□□ -1.76
CAPN6Q9Y6Q1 AL137849.1-201ENST00000604767 169 ntBASIC4.08□□□□□ -1.76
CAPN6Q9Y6Q1 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CAPN6Q9Y6Q1 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC4.07□□□□□ -1.76
CAPN6Q9Y6Q1 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC4.07□□□□□ -1.76
CAPN6Q9Y6Q1 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
CAPN6Q9Y6Q1 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CAPN6Q9Y6Q1 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC4.07□□□□□ -1.76
CAPN6Q9Y6Q1 AC073073.2-201ENST00000609827 2578 ntBASIC4.07□□□□□ -1.76
CAPN6Q9Y6Q1 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CAPN6Q9Y6Q1 RNU6-682P-201ENST00000363843 106 ntBASIC4.07□□□□□ -1.76
CAPN6Q9Y6Q1 RNU6-926P-201ENST00000384075 107 ntBASIC4.07□□□□□ -1.76
CAPN6Q9Y6Q1 RNU6-843P-201ENST00000384454 104 ntBASIC4.07□□□□□ -1.76
CAPN6Q9Y6Q1 MIR3074-201ENST00000384885 81 ntBASIC4.07□□□□□ -1.76
CAPN6Q9Y6Q1 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
CAPN6Q9Y6Q1 Y_RNA.626-201ENST00000411288 95 ntBASIC4.07□□□□□ -1.76
CAPN6Q9Y6Q1 AC016397.1-201ENST00000412463 242 ntBASIC4.07□□□□□ -1.76
CAPN6Q9Y6Q1 AC002075.2-201ENST00000425207 252 ntBASIC4.07□□□□□ -1.76
CAPN6Q9Y6Q1 AL606753.1-201ENST00000427435 87 ntBASIC4.07□□□□□ -1.76
CAPN6Q9Y6Q1 AC016700.2-201ENST00000446011 156 ntBASIC4.07□□□□□ -1.76
CAPN6Q9Y6Q1 AL353705.4-201ENST00000449661 238 ntBASIC4.07□□□□□ -1.76
CAPN6Q9Y6Q1 NUTF2P7-201ENST00000453086 375 ntBASIC4.07□□□□□ -1.76
CAPN6Q9Y6Q1 RPL23AP75-201ENST00000491601 451 ntBASIC4.07□□□□□ -1.76
CAPN6Q9Y6Q1 HMGB1P22-201ENST00000505315 124 ntBASIC4.07□□□□□ -1.76
CAPN6Q9Y6Q1 AKIRIN2P1-201ENST00000505898 352 ntBASIC4.07□□□□□ -1.76
CAPN6Q9Y6Q1 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC4.07□□□□□ -1.76
CAPN6Q9Y6Q1 UBE2Q2P8-201ENST00000560644 102 ntBASIC4.07□□□□□ -1.76
CAPN6Q9Y6Q1 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.07□□□□□ -1.76
CAPN6Q9Y6Q1 AC053481.4-201ENST00000583164 216 ntBASIC4.07□□□□□ -1.76
CAPN6Q9Y6Q1 SNRPGP15-201ENST00000600149 222 ntBASIC4.07□□□□□ -1.76
CAPN6Q9Y6Q1 AC037487.3-201ENST00000606668 112 ntBASIC4.07□□□□□ -1.76
CAPN6Q9Y6Q1 AC099506.2-201ENST00000623074 221 ntBASIC4.07□□□□□ -1.76
CAPN6Q9Y6Q1 U6.99-201ENST00000637524 83 ntBASIC4.07□□□□□ -1.76
CAPN6Q9Y6Q1 PSMD5-AS1-215ENST00000640622 205 ntBASIC4.07□□□□□ -1.76
CAPN6Q9Y6Q1 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CAPN6Q9Y6Q1 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.07□□□□□ -1.76
CAPN6Q9Y6Q1 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CAPN6Q9Y6Q1 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.07□□□□□ -1.76
CAPN6Q9Y6Q1 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC4.07□□□□□ -1.76
CAPN6Q9Y6Q1 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CAPN6Q9Y6Q1 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC4.06□□□□□ -1.76
CAPN6Q9Y6Q1 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.06□□□□□ -1.76
CAPN6Q9Y6Q1 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CAPN6Q9Y6Q1 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.06□□□□□ -1.76
CAPN6Q9Y6Q1 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC4.06□□□□□ -1.76
CAPN6Q9Y6Q1 RNU6-1159P-201ENST00000362933 107 ntBASIC4.06□□□□□ -1.76
CAPN6Q9Y6Q1 RNU6-527P-201ENST00000363425 104 ntBASIC4.06□□□□□ -1.76
CAPN6Q9Y6Q1 RNU6-879P-201ENST00000364328 108 ntBASIC4.06□□□□□ -1.76
CAPN6Q9Y6Q1 Y_RNA.504-201ENST00000384481 104 ntBASIC4.06□□□□□ -1.76
CAPN6Q9Y6Q1 MIR124-3-201ENST00000384866 87 ntBASIC4.06□□□□□ -1.76
CAPN6Q9Y6Q1 RNU6-1140P-201ENST00000410517 106 ntBASIC4.06□□□□□ -1.76
CAPN6Q9Y6Q1 AC005002.2-201ENST00000438228 269 ntBASIC4.06□□□□□ -1.76
CAPN6Q9Y6Q1 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC4.06□□□□□ -1.76
CAPN6Q9Y6Q1 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4.06□□□□□ -1.76
CAPN6Q9Y6Q1 RPS29P33-201ENST00000456717 146 ntBASIC4.06□□□□□ -1.76
CAPN6Q9Y6Q1 snoU13.24-201ENST00000458998 104 ntBASIC4.06□□□□□ -1.76
CAPN6Q9Y6Q1 RN7SL610P-201ENST00000463845 291 ntBASIC4.06□□□□□ -1.76
CAPN6Q9Y6Q1 COX6CP14-201ENST00000469580 174 ntBASIC4.06□□□□□ -1.76
CAPN6Q9Y6Q1 RPL23AP49-201ENST00000492925 468 ntBASIC4.06□□□□□ -1.76
CAPN6Q9Y6Q1 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC4.06□□□□□ -1.76
CAPN6Q9Y6Q1 Y_RNA.683-201ENST00000516508 93 ntBASIC4.06□□□□□ -1.76
CAPN6Q9Y6Q1 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms