Protein–RNA interactions for Protein: Q9Y5W9

SNX11, Sorting nexin-11, humanhuman

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11Q9Y5W9 U3.39-201ENST00000408569 239 ntBASIC4.06□□□□□ -1.76
SNX11Q9Y5W9 RNU6-1135P-201ENST00000411083 103 ntBASIC4.06□□□□□ -1.76
SNX11Q9Y5W9 CYP4F29P-201ENST00000420685 446 ntBASIC4.06□□□□□ -1.76
SNX11Q9Y5W9 CYCSP32-201ENST00000440548 321 ntBASIC4.06□□□□□ -1.76
SNX11Q9Y5W9 AC006011.1-201ENST00000442758 349 ntBASIC4.06□□□□□ -1.76
SNX11Q9Y5W9 ANP32BP2-201ENST00000454525 545 ntBASIC4.06□□□□□ -1.76
SNX11Q9Y5W9 AP001324.2-201ENST00000461163 319 ntBASIC4.06□□□□□ -1.76
SNX11Q9Y5W9 AC010265.1-201ENST00000513509 211 ntBASIC4.06□□□□□ -1.76
SNX11Q9Y5W9 RNU6-1219P-201ENST00000516143 112 ntBASIC4.06□□□□□ -1.76
SNX11Q9Y5W9 SCARNA15.2-201ENST00000516409 127 ntBASIC4.06□□□□□ -1.76
SNX11Q9Y5W9 RNU4-60P-201ENST00000517239 135 ntBASIC4.06□□□□□ -1.76
SNX11Q9Y5W9 RPL21P9-201ENST00000556149 474 ntBASIC4.06□□□□□ -1.76
SNX11Q9Y5W9 UBE2Q2P8-201ENST00000560644 102 ntBASIC4.06□□□□□ -1.76
SNX11Q9Y5W9 MIR4282-201ENST00000583613 67 ntBASIC4.06□□□□□ -1.76
SNX11Q9Y5W9 AC008749.1-201ENST00000597650 306 ntBASIC4.06□□□□□ -1.76
SNX11Q9Y5W9 AC008739.3-201ENST00000603262 127 ntBASIC4.06□□□□□ -1.76
SNX11Q9Y5W9 AC091953.5-201ENST00000622919 233 ntBASIC4.06□□□□□ -1.76
SNX11Q9Y5W9 SCARNA4-201ENST00000629045 128 ntBASIC4.06□□□□□ -1.76
SNX11Q9Y5W9 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC4.06□□□□□ -1.76
SNX11Q9Y5W9 Z82217.1-201ENST00000625157 8149 ntBASIC4.06□□□□□ -1.76
SNX11Q9Y5W9 AC116096.1-201ENST00000566804 2314 ntBASIC4.06□□□□□ -1.76
SNX11Q9Y5W9 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
SNX11Q9Y5W9 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
SNX11Q9Y5W9 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.06□□□□□ -1.76
SNX11Q9Y5W9 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
SNX11Q9Y5W9 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
SNX11Q9Y5W9 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC4.05□□□□□ -1.76
SNX11Q9Y5W9 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
SNX11Q9Y5W9 RNA5SP124-201ENST00000362739 110 ntBASIC4.05□□□□□ -1.76
SNX11Q9Y5W9 RNU6-626P-201ENST00000363354 107 ntBASIC4.05□□□□□ -1.76
SNX11Q9Y5W9 RNU6-1117P-201ENST00000384525 104 ntBASIC4.05□□□□□ -1.76
SNX11Q9Y5W9 MIR1179-201ENST00000408703 91 ntBASIC4.05□□□□□ -1.76
SNX11Q9Y5W9 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC4.05□□□□□ -1.76
SNX11Q9Y5W9 IGKV1OR9-2-201ENST00000431378 277 ntBASIC4.05□□□□□ -1.76
SNX11Q9Y5W9 AC073901.1-201ENST00000462471 408 ntBASIC4.05□□□□□ -1.76
SNX11Q9Y5W9 RPS20P22-201ENST00000473700 357 ntBASIC4.05□□□□□ -1.76
SNX11Q9Y5W9 KC877373.1-201ENST00000479066 408 ntBASIC4.05□□□□□ -1.76
SNX11Q9Y5W9 AC091959.1-201ENST00000495857 238 ntBASIC4.05□□□□□ -1.76
SNX11Q9Y5W9 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.05□□□□□ -1.76
SNX11Q9Y5W9 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC4.05□□□□□ -1.76
SNX11Q9Y5W9 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC4.05□□□□□ -1.76
SNX11Q9Y5W9 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.05□□□□□ -1.76
SNX11Q9Y5W9 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC4.05□□□□□ -1.76
SNX11Q9Y5W9 AL354798.1-201ENST00000622505 329 ntBASIC4.05□□□□□ -1.76
SNX11Q9Y5W9 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC4.05□□□□□ -1.76
SNX11Q9Y5W9 AC241585.2-209ENST00000638217 143 ntBASIC4.05□□□□□ -1.76
SNX11Q9Y5W9 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
SNX11Q9Y5W9 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC4.05□□□□□ -1.76
SNX11Q9Y5W9 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC4.05□□□□□ -1.76
SNX11Q9Y5W9 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
SNX11Q9Y5W9 AC011266.1-201ENST00000624119 3569 ntBASIC4.05□□□□□ -1.76
SNX11Q9Y5W9 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC4.05□□□□□ -1.76
SNX11Q9Y5W9 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.05□□□□□ -1.76
SNX11Q9Y5W9 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
SNX11Q9Y5W9 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC4.05□□□□□ -1.76
SNX11Q9Y5W9 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
SNX11Q9Y5W9 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.04□□□□□ -1.76
SNX11Q9Y5W9 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
SNX11Q9Y5W9 RNU6-541P-201ENST00000384709 110 ntBASIC4.04□□□□□ -1.76
SNX11Q9Y5W9 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
SNX11Q9Y5W9 SNORA11.1-201ENST00000408133 129 ntBASIC4.04□□□□□ -1.76
SNX11Q9Y5W9 RAB9AP3-201ENST00000412737 573 ntBASIC4.04□□□□□ -1.76
SNX11Q9Y5W9 AC004552.1-201ENST00000419089 348 ntBASIC4.04□□□□□ -1.76
SNX11Q9Y5W9 AP000907.1-201ENST00000428428 510 ntBASIC4.04□□□□□ -1.76
SNX11Q9Y5W9 MTCO1P5-201ENST00000433573 344 ntBASIC4.04□□□□□ -1.76
SNX11Q9Y5W9 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
SNX11Q9Y5W9 RAB9AP1-201ENST00000449393 573 ntBASIC4.04□□□□□ -1.76
SNX11Q9Y5W9 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC4.04□□□□□ -1.76
SNX11Q9Y5W9 RPS26P3-201ENST00000470205 348 ntBASIC4.04□□□□□ -1.76
SNX11Q9Y5W9 AC090543.2-201ENST00000483963 348 ntBASIC4.04□□□□□ -1.76
SNX11Q9Y5W9 AC004057.1-201ENST00000485827 348 ntBASIC4.04□□□□□ -1.76
SNX11Q9Y5W9 BTF3L4P4-201ENST00000506381 449 ntBASIC4.04□□□□□ -1.76
SNX11Q9Y5W9 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC4.04□□□□□ -1.76
SNX11Q9Y5W9 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC4.04□□□□□ -1.76
SNX11Q9Y5W9 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC4.04□□□□□ -1.76
SNX11Q9Y5W9 MIR3944-201ENST00000581277 108 ntBASIC4.04□□□□□ -1.76
SNX11Q9Y5W9 AL121772.2-201ENST00000614331 297 ntBASIC4.04□□□□□ -1.76
SNX11Q9Y5W9 IGHVIII-44-202ENST00000636235 289 ntBASIC4.04□□□□□ -1.76
SNX11Q9Y5W9 U6.99-201ENST00000637524 83 ntBASIC4.04□□□□□ -1.76
SNX11Q9Y5W9 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.04□□□□□ -1.76
SNX11Q9Y5W9 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
SNX11Q9Y5W9 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
SNX11Q9Y5W9 MAPK10-304ENST00000641341 3984 ntBASIC4.04□□□□□ -1.76
SNX11Q9Y5W9 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
SNX11Q9Y5W9 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
SNX11Q9Y5W9 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
SNX11Q9Y5W9 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
SNX11Q9Y5W9 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.04□□□□□ -1.76
SNX11Q9Y5W9 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
SNX11Q9Y5W9 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.03□□□□□ -1.76
SNX11Q9Y5W9 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC4.03□□□□□ -1.76
SNX11Q9Y5W9 AL592182.3-201ENST00000642132 3304 ntBASIC4.03□□□□□ -1.76
SNX11Q9Y5W9 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
SNX11Q9Y5W9 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
SNX11Q9Y5W9 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
SNX11Q9Y5W9 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
SNX11Q9Y5W9 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC4.03□□□□□ -1.76
SNX11Q9Y5W9 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
SNX11Q9Y5W9 RBBP8P1-201ENST00000449447 1844 ntBASIC4.03□□□□□ -1.76
SNX11Q9Y5W9 Y_RNA.81-201ENST00000362997 102 ntBASIC4.03□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 89.9 ms