Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
PDZRN3Q9UPQ7 MIR331-201ENST00000362302 94 ntBASIC5.53□□□□□ -1.52
PDZRN3Q9UPQ7 RNY1P11-201ENST00000363759 113 ntBASIC5.53□□□□□ -1.52
PDZRN3Q9UPQ7 RNA5SP513-201ENST00000364648 118 ntBASIC5.53□□□□□ -1.52
PDZRN3Q9UPQ7 SNORA62.3-201ENST00000365110 153 ntBASIC5.53□□□□□ -1.52
PDZRN3Q9UPQ7 Y_RNA.348-201ENST00000365403 103 ntBASIC5.53□□□□□ -1.52
PDZRN3Q9UPQ7 RNU6-827P-201ENST00000365553 106 ntBASIC5.53□□□□□ -1.52
PDZRN3Q9UPQ7 SNORA74C-2-201ENST00000411179 201 ntBASIC5.53□□□□□ -1.52
PDZRN3Q9UPQ7 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
PDZRN3Q9UPQ7 BTF3P11-201ENST00000426582 477 ntBASIC5.53□□□□□ -1.52
PDZRN3Q9UPQ7 AL117339.2-201ENST00000430475 180 ntBASIC5.53□□□□□ -1.52
PDZRN3Q9UPQ7 RANP8-201ENST00000444720 713 ntBASIC5.53□□□□□ -1.52
PDZRN3Q9UPQ7 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC5.53□□□□□ -1.52
PDZRN3Q9UPQ7 RN7SL132P-201ENST00000478131 296 ntBASIC5.53□□□□□ -1.52
PDZRN3Q9UPQ7 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC5.53□□□□□ -1.52
PDZRN3Q9UPQ7 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC5.53□□□□□ -1.52
PDZRN3Q9UPQ7 MTND6P33-201ENST00000571794 183 ntBASIC5.53□□□□□ -1.52
PDZRN3Q9UPQ7 MIR4504-201ENST00000577413 92 ntBASIC5.53□□□□□ -1.52
PDZRN3Q9UPQ7 MIR548AC-201ENST00000585049 88 ntBASIC5.53□□□□□ -1.52
PDZRN3Q9UPQ7 AL670379.3-201ENST00000605040 251 ntBASIC5.53□□□□□ -1.52
PDZRN3Q9UPQ7 uc_338.28-201ENST00000612082 187 ntBASIC5.53□□□□□ -1.52
PDZRN3Q9UPQ7 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC5.53□□□□□ -1.52
PDZRN3Q9UPQ7 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC5.53□□□□□ -1.52
PDZRN3Q9UPQ7 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
PDZRN3Q9UPQ7 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC5.52□□□□□ -1.53
PDZRN3Q9UPQ7 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
PDZRN3Q9UPQ7 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC5.52□□□□□ -1.53
PDZRN3Q9UPQ7 RNA5SP361-201ENST00000362686 118 ntBASIC5.52□□□□□ -1.53
PDZRN3Q9UPQ7 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
PDZRN3Q9UPQ7 RNA5SP213-201ENST00000391031 106 ntBASIC5.52□□□□□ -1.53
PDZRN3Q9UPQ7 MAP1LC3BP1-201ENST00000417653 379 ntBASIC5.52□□□□□ -1.53
PDZRN3Q9UPQ7 CYP4F29P-201ENST00000420685 446 ntBASIC5.52□□□□□ -1.53
PDZRN3Q9UPQ7 RN7SL542P-201ENST00000467147 294 ntBASIC5.52□□□□□ -1.53
PDZRN3Q9UPQ7 RPL23AP2-201ENST00000471227 466 ntBASIC5.52□□□□□ -1.53
PDZRN3Q9UPQ7 RN7SL812P-201ENST00000493791 279 ntBASIC5.52□□□□□ -1.53
PDZRN3Q9UPQ7 RN7SL691P-201ENST00000494487 301 ntBASIC5.52□□□□□ -1.53
PDZRN3Q9UPQ7 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC5.52□□□□□ -1.53
PDZRN3Q9UPQ7 RNU2-60P-201ENST00000517290 128 ntBASIC5.52□□□□□ -1.53
PDZRN3Q9UPQ7 AC023632.4-201ENST00000517783 191 ntBASIC5.52□□□□□ -1.53
PDZRN3Q9UPQ7 AC100767.1-201ENST00000528178 123 ntBASIC5.52□□□□□ -1.53
PDZRN3Q9UPQ7 MIR4512-201ENST00000583257 77 ntBASIC5.52□□□□□ -1.53
PDZRN3Q9UPQ7 Clostridiales-1.2-201ENST00000636724 160 ntBASIC5.52□□□□□ -1.53
PDZRN3Q9UPQ7 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
PDZRN3Q9UPQ7 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
PDZRN3Q9UPQ7 AL079305.1-201ENST00000623159 3008 ntBASIC5.52□□□□□ -1.53
PDZRN3Q9UPQ7 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
PDZRN3Q9UPQ7 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC5.52□□□□□ -1.53
PDZRN3Q9UPQ7 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
PDZRN3Q9UPQ7 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
PDZRN3Q9UPQ7 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC5.51□□□□□ -1.53
PDZRN3Q9UPQ7 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
PDZRN3Q9UPQ7 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
PDZRN3Q9UPQ7 RNU4-80P-201ENST00000363200 141 ntBASIC5.51□□□□□ -1.53
PDZRN3Q9UPQ7 Y_RNA.123-201ENST00000363338 102 ntBASIC5.51□□□□□ -1.53
PDZRN3Q9UPQ7 Y_RNA.230-201ENST00000364348 109 ntBASIC5.51□□□□□ -1.53
PDZRN3Q9UPQ7 Y_RNA.294-201ENST00000364916 102 ntBASIC5.51□□□□□ -1.53
PDZRN3Q9UPQ7 RNU6-1180P-201ENST00000364935 107 ntBASIC5.51□□□□□ -1.53
PDZRN3Q9UPQ7 RNA5SP283-201ENST00000365604 119 ntBASIC5.51□□□□□ -1.53
PDZRN3Q9UPQ7 AC069218.2-201ENST00000411665 344 ntBASIC5.51□□□□□ -1.53
PDZRN3Q9UPQ7 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC5.51□□□□□ -1.53
PDZRN3Q9UPQ7 AC010655.1-201ENST00000449336 292 ntBASIC5.51□□□□□ -1.53
PDZRN3Q9UPQ7 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC5.51□□□□□ -1.53
PDZRN3Q9UPQ7 RPS26P28-201ENST00000470806 348 ntBASIC5.51□□□□□ -1.53
PDZRN3Q9UPQ7 RNA5SP497-201ENST00000516081 97 ntBASIC5.51□□□□□ -1.53
PDZRN3Q9UPQ7 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC5.51□□□□□ -1.53
PDZRN3Q9UPQ7 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC5.51□□□□□ -1.53
PDZRN3Q9UPQ7 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC5.51□□□□□ -1.53
PDZRN3Q9UPQ7 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC5.51□□□□□ -1.53
PDZRN3Q9UPQ7 RPL23AP87-202ENST00000573039 466 ntBASIC5.51□□□□□ -1.53
PDZRN3Q9UPQ7 RMST_4.1-201ENST00000616886 107 ntBASIC5.51□□□□□ -1.53
PDZRN3Q9UPQ7 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
PDZRN3Q9UPQ7 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC5.51□□□□□ -1.53
PDZRN3Q9UPQ7 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
PDZRN3Q9UPQ7 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
PDZRN3Q9UPQ7 LINC01355-201ENST00000566551 5444 ntBASIC5.5□□□□□ -1.53
PDZRN3Q9UPQ7 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
PDZRN3Q9UPQ7 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC5.5□□□□□ -1.53
PDZRN3Q9UPQ7 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC5.5□□□□□ -1.53
PDZRN3Q9UPQ7 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC5.5□□□□□ -1.53
PDZRN3Q9UPQ7 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
PDZRN3Q9UPQ7 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
PDZRN3Q9UPQ7 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
PDZRN3Q9UPQ7 AC018555.1-201ENST00000567548 1980 ntBASIC5.5□□□□□ -1.53
PDZRN3Q9UPQ7 RNU1-15P-201ENST00000353977 144 ntBASIC5.5□□□□□ -1.53
PDZRN3Q9UPQ7 MIR372-201ENST00000362225 67 ntBASIC5.5□□□□□ -1.53
PDZRN3Q9UPQ7 RNU1-108P-201ENST00000362556 161 ntBASIC5.5□□□□□ -1.53
PDZRN3Q9UPQ7 RNU6-961P-201ENST00000363893 105 ntBASIC5.5□□□□□ -1.53
PDZRN3Q9UPQ7 RNU6-1025P-201ENST00000410629 104 ntBASIC5.5□□□□□ -1.53
PDZRN3Q9UPQ7 MIR1911-201ENST00000410783 80 ntBASIC5.5□□□□□ -1.53
PDZRN3Q9UPQ7 RPS20P14-201ENST00000412545 360 ntBASIC5.5□□□□□ -1.53
PDZRN3Q9UPQ7 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC5.5□□□□□ -1.53
PDZRN3Q9UPQ7 AC127537.2-201ENST00000439258 465 ntBASIC5.5□□□□□ -1.53
PDZRN3Q9UPQ7 AC073587.1-201ENST00000447093 876 ntBASIC5.5□□□□□ -1.53
PDZRN3Q9UPQ7 AL358232.1-201ENST00000448030 501 ntBASIC5.5□□□□□ -1.53
PDZRN3Q9UPQ7 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC5.5□□□□□ -1.53
PDZRN3Q9UPQ7 snoU13.30-201ENST00000458951 104 ntBASIC5.5□□□□□ -1.53
PDZRN3Q9UPQ7 PPBPP1-201ENST00000510807 373 ntBASIC5.5□□□□□ -1.53
PDZRN3Q9UPQ7 AC060766.3-201ENST00000591442 263 ntBASIC5.5□□□□□ -1.53
PDZRN3Q9UPQ7 FAM27D1-201ENST00000612308 341 ntBASIC5.5□□□□□ -1.53
PDZRN3Q9UPQ7 SMCR2_2.1-201ENST00000619783 161 ntBASIC5.5□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms