Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC5.13□□□□□ -1.59
LHX6Q9UPM6 IGLL4P-201ENST00000614590 133 ntBASIC5.13□□□□□ -1.59
LHX6Q9UPM6 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.13□□□□□ -1.59
LHX6Q9UPM6 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
LHX6Q9UPM6 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
LHX6Q9UPM6 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
LHX6Q9UPM6 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
LHX6Q9UPM6 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
LHX6Q9UPM6 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC5.12□□□□□ -1.59
LHX6Q9UPM6 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
LHX6Q9UPM6 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
LHX6Q9UPM6 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
LHX6Q9UPM6 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC5.12□□□□□ -1.59
LHX6Q9UPM6 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
LHX6Q9UPM6 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
LHX6Q9UPM6 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
LHX6Q9UPM6 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
LHX6Q9UPM6 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
LHX6Q9UPM6 RNU6-178P-201ENST00000384631 104 ntBASIC5.12□□□□□ -1.59
LHX6Q9UPM6 RPS23P2-201ENST00000463671 415 ntBASIC5.12□□□□□ -1.59
LHX6Q9UPM6 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC5.12□□□□□ -1.59
LHX6Q9UPM6 RN7SKP276-201ENST00000516242 268 ntBASIC5.12□□□□□ -1.59
LHX6Q9UPM6 AC136777.2-201ENST00000522979 358 ntBASIC5.12□□□□□ -1.59
LHX6Q9UPM6 MIR6780A-201ENST00000615089 68 ntBASIC5.12□□□□□ -1.59
LHX6Q9UPM6 AC080128.1-201ENST00000474389 1917 ntBASIC5.12□□□□□ -1.59
LHX6Q9UPM6 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
LHX6Q9UPM6 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC5.12□□□□□ -1.59
LHX6Q9UPM6 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC5.12□□□□□ -1.59
LHX6Q9UPM6 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
LHX6Q9UPM6 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.12□□□□□ -1.59
LHX6Q9UPM6 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.12□□□□□ -1.59
LHX6Q9UPM6 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
LHX6Q9UPM6 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC5.12□□□□□ -1.59
LHX6Q9UPM6 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
LHX6Q9UPM6 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC5.12□□□□□ -1.59
LHX6Q9UPM6 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
LHX6Q9UPM6 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
LHX6Q9UPM6 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.11□□□□□ -1.59
LHX6Q9UPM6 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.11□□□□□ -1.59
LHX6Q9UPM6 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC5.11□□□□□ -1.59
LHX6Q9UPM6 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
LHX6Q9UPM6 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
LHX6Q9UPM6 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
LHX6Q9UPM6 Y_RNA.111-201ENST00000363248 100 ntBASIC5.11□□□□□ -1.59
LHX6Q9UPM6 Y_RNA.366-201ENST00000365540 102 ntBASIC5.11□□□□□ -1.59
LHX6Q9UPM6 SNORA18.2-201ENST00000383865 132 ntBASIC5.11□□□□□ -1.59
LHX6Q9UPM6 SNORA57.1-201ENST00000391227 145 ntBASIC5.11□□□□□ -1.59
LHX6Q9UPM6 PTMAP5-201ENST00000393073 333 ntBASIC5.11□□□□□ -1.59
LHX6Q9UPM6 AL354714.3-201ENST00000447284 493 ntBASIC5.11□□□□□ -1.59
LHX6Q9UPM6 RPL23AP56-201ENST00000460778 453 ntBASIC5.11□□□□□ -1.59
LHX6Q9UPM6 AC009127.1-201ENST00000467090 155 ntBASIC5.11□□□□□ -1.59
LHX6Q9UPM6 AC010285.1-201ENST00000470580 392 ntBASIC5.11□□□□□ -1.59
LHX6Q9UPM6 RNU6-581P-201ENST00000516214 105 ntBASIC5.11□□□□□ -1.59
LHX6Q9UPM6 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC5.11□□□□□ -1.59
LHX6Q9UPM6 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC5.11□□□□□ -1.59
LHX6Q9UPM6 BMS1P21-201ENST00000634565 365 ntBASIC5.11□□□□□ -1.59
LHX6Q9UPM6 MIR6830-201ENST00000636015 70 ntBASIC5.11□□□□□ -1.59
LHX6Q9UPM6 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.11□□□□□ -1.59
LHX6Q9UPM6 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
LHX6Q9UPM6 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.11□□□□□ -1.59
LHX6Q9UPM6 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
LHX6Q9UPM6 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.11□□□□□ -1.59
LHX6Q9UPM6 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC5.1□□□□□ -1.59
LHX6Q9UPM6 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
LHX6Q9UPM6 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
LHX6Q9UPM6 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
LHX6Q9UPM6 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
LHX6Q9UPM6 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
LHX6Q9UPM6 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
LHX6Q9UPM6 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
LHX6Q9UPM6 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
LHX6Q9UPM6 AL121890.1-201ENST00000435457 205 ntBASIC5.1□□□□□ -1.59
LHX6Q9UPM6 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC5.1□□□□□ -1.59
LHX6Q9UPM6 snoU13.22-201ENST00000459428 104 ntBASIC5.1□□□□□ -1.59
LHX6Q9UPM6 SNORA31.8-201ENST00000516327 108 ntBASIC5.1□□□□□ -1.59
LHX6Q9UPM6 RNU6-1282P-201ENST00000516735 96 ntBASIC5.1□□□□□ -1.59
LHX6Q9UPM6 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
LHX6Q9UPM6 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC5.1□□□□□ -1.59
LHX6Q9UPM6 AC084364.2-201ENST00000546924 395 ntBASIC5.1□□□□□ -1.59
LHX6Q9UPM6 MIR4737-201ENST00000583979 81 ntBASIC5.1□□□□□ -1.59
LHX6Q9UPM6 AC006115.2-201ENST00000596823 202 ntBASIC5.1□□□□□ -1.59
LHX6Q9UPM6 AC109583.2-201ENST00000617367 129 ntBASIC5.1□□□□□ -1.59
LHX6Q9UPM6 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
LHX6Q9UPM6 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.1□□□□□ -1.59
LHX6Q9UPM6 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC5.1□□□□□ -1.59
LHX6Q9UPM6 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
LHX6Q9UPM6 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC5.09□□□□□ -1.59
LHX6Q9UPM6 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
LHX6Q9UPM6 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
LHX6Q9UPM6 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
LHX6Q9UPM6 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
LHX6Q9UPM6 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5.09□□□□□ -1.59
LHX6Q9UPM6 MIR133A2-201ENST00000347538 102 ntBASIC5.09□□□□□ -1.59
LHX6Q9UPM6 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
LHX6Q9UPM6 RPL11P3-201ENST00000395256 523 ntBASIC5.09□□□□□ -1.59
LHX6Q9UPM6 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC5.09□□□□□ -1.59
LHX6Q9UPM6 AL500522.2-201ENST00000448562 343 ntBASIC5.09□□□□□ -1.59
LHX6Q9UPM6 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC5.09□□□□□ -1.59
LHX6Q9UPM6 AC091826.1-201ENST00000514065 313 ntBASIC5.09□□□□□ -1.59
LHX6Q9UPM6 AC007751.1-201ENST00000529260 376 ntBASIC5.09□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 112.3 ms