Protein–RNA interactions for Protein: Q9P031

CCDC59, Thyroid transcription factor 1-associated protein 26, humanhuman

Known RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC59Q9P031 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC1.63□□□□□ -2.15
CCDC59Q9P031 AC008521.1-201ENST00000587471 187 ntBASIC1.63□□□□□ -2.15
CCDC59Q9P031 AL353778.1-201ENST00000603149 408 ntBASIC1.63□□□□□ -2.15
CCDC59Q9P031 AL033523.1-201ENST00000605153 153 ntBASIC1.63□□□□□ -2.15
CCDC59Q9P031 AL359314.1-201ENST00000616913 261 ntBASIC1.63□□□□□ -2.15
CCDC59Q9P031 AC025034.2-201ENST00000623264 286 ntBASIC1.63□□□□□ -2.15
CCDC59Q9P031 AC093648.1-201ENST00000623546 606 ntBASIC1.63□□□□□ -2.15
CCDC59Q9P031 AC068787.1-201ENST00000623908 691 ntBASIC1.63□□□□□ -2.15
CCDC59Q9P031 AC099654.13-201ENST00000639774 207 ntBASIC1.63□□□□□ -2.15
CCDC59Q9P031 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.63□□□□□ -2.15
CCDC59Q9P031 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
CCDC59Q9P031 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
CCDC59Q9P031 MTND5P6-201ENST00000422338 1798 ntBASIC1.62□□□□□ -2.15
CCDC59Q9P031 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC1.62□□□□□ -2.15
CCDC59Q9P031 SNORD56.1-201ENST00000362913 68 ntBASIC1.62□□□□□ -2.15
CCDC59Q9P031 RNU6-944P-201ENST00000364023 107 ntBASIC1.62□□□□□ -2.15
CCDC59Q9P031 RNA5SP363-201ENST00000365072 115 ntBASIC1.62□□□□□ -2.15
CCDC59Q9P031 RNU6-61P-201ENST00000365528 109 ntBASIC1.62□□□□□ -2.15
CCDC59Q9P031 RNU6-611P-201ENST00000384276 104 ntBASIC1.62□□□□□ -2.15
CCDC59Q9P031 RPL23AP32-201ENST00000395315 459 ntBASIC1.62□□□□□ -2.15
CCDC59Q9P031 MIR1283-2-201ENST00000408621 87 ntBASIC1.62□□□□□ -2.15
CCDC59Q9P031 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
CCDC59Q9P031 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC1.62□□□□□ -2.15
CCDC59Q9P031 AC244636.1-201ENST00000421152 228 ntBASIC1.62□□□□□ -2.15
CCDC59Q9P031 AC011233.1-201ENST00000422812 283 ntBASIC1.62□□□□□ -2.15
CCDC59Q9P031 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC1.62□□□□□ -2.15
CCDC59Q9P031 HMGB1P31-201ENST00000437242 427 ntBASIC1.62□□□□□ -2.15
CCDC59Q9P031 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC1.62□□□□□ -2.15
CCDC59Q9P031 PRELID3BP1-201ENST00000457142 540 ntBASIC1.62□□□□□ -2.15
CCDC59Q9P031 snoU13.14-201ENST00000459372 104 ntBASIC1.62□□□□□ -2.15
CCDC59Q9P031 RNU1-86P-201ENST00000516108 154 ntBASIC1.62□□□□□ -2.15
CCDC59Q9P031 Y_RNA.672-201ENST00000516289 104 ntBASIC1.62□□□□□ -2.15
CCDC59Q9P031 RNU1-107P-201ENST00000516617 154 ntBASIC1.62□□□□□ -2.15
CCDC59Q9P031 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.62□□□□□ -2.15
CCDC59Q9P031 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC1.62□□□□□ -2.15
CCDC59Q9P031 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC1.62□□□□□ -2.15
CCDC59Q9P031 AC022616.3-201ENST00000523940 148 ntBASIC1.62□□□□□ -2.15
CCDC59Q9P031 AP001646.1-201ENST00000527936 915 ntBASIC1.62□□□□□ -2.15
CCDC59Q9P031 AC022878.1-201ENST00000530684 149 ntBASIC1.62□□□□□ -2.15
CCDC59Q9P031 LARP7P3-201ENST00000579888 337 ntBASIC1.62□□□□□ -2.15
CCDC59Q9P031 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC1.62□□□□□ -2.15
CCDC59Q9P031 AL078605.1-201ENST00000603529 500 ntBASIC1.62□□□□□ -2.15
CCDC59Q9P031 AL451064.1-201ENST00000607718 471 ntBASIC1.62□□□□□ -2.15
CCDC59Q9P031 AL132822.1-201ENST00000617063 513 ntBASIC1.62□□□□□ -2.15
CCDC59Q9P031 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC1.62□□□□□ -2.15
CCDC59Q9P031 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC1.62□□□□□ -2.15
CCDC59Q9P031 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC1.62□□□□□ -2.15
CCDC59Q9P031 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
CCDC59Q9P031 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC1.61□□□□□ -2.15
CCDC59Q9P031 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
CCDC59Q9P031 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
CCDC59Q9P031 RNU6-371P-201ENST00000364283 108 ntBASIC1.61□□□□□ -2.15
CCDC59Q9P031 RNU4-42P-201ENST00000364738 142 ntBASIC1.61□□□□□ -2.15
CCDC59Q9P031 SNORA8-201ENST00000384574 139 ntBASIC1.61□□□□□ -2.15
CCDC59Q9P031 MIR29C-201ENST00000385231 88 ntBASIC1.61□□□□□ -2.15
CCDC59Q9P031 RNU2-20P-201ENST00000410425 191 ntBASIC1.61□□□□□ -2.15
CCDC59Q9P031 RPL21P90-201ENST00000415692 466 ntBASIC1.61□□□□□ -2.15
CCDC59Q9P031 BX510359.4-201ENST00000423750 193 ntBASIC1.61□□□□□ -2.15
CCDC59Q9P031 CALM2P2-201ENST00000428512 440 ntBASIC1.61□□□□□ -2.15
CCDC59Q9P031 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC1.61□□□□□ -2.15
CCDC59Q9P031 AL353752.1-201ENST00000454946 260 ntBASIC1.61□□□□□ -2.15
CCDC59Q9P031 RPL30P12-201ENST00000474666 353 ntBASIC1.61□□□□□ -2.15
CCDC59Q9P031 RPL21P99-201ENST00000480369 423 ntBASIC1.61□□□□□ -2.15
CCDC59Q9P031 RNU6-1220P-201ENST00000517126 108 ntBASIC1.61□□□□□ -2.15
CCDC59Q9P031 RN7SKP256-201ENST00000517201 314 ntBASIC1.61□□□□□ -2.15
CCDC59Q9P031 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC1.61□□□□□ -2.15
CCDC59Q9P031 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC1.61□□□□□ -2.15
CCDC59Q9P031 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC1.61□□□□□ -2.15
CCDC59Q9P031 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.61□□□□□ -2.15
CCDC59Q9P031 DUXAP5-201ENST00000529668 529 ntBASIC1.61□□□□□ -2.15
CCDC59Q9P031 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.61□□□□□ -2.15
CCDC59Q9P031 AC022616.8-201ENST00000533569 253 ntBASIC1.61□□□□□ -2.15
CCDC59Q9P031 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
CCDC59Q9P031 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC1.61□□□□□ -2.15
CCDC59Q9P031 RPL21P5-201ENST00000554662 472 ntBASIC1.61□□□□□ -2.15
CCDC59Q9P031 UBE2Q2P8-201ENST00000560644 102 ntBASIC1.61□□□□□ -2.15
CCDC59Q9P031 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.61□□□□□ -2.15
CCDC59Q9P031 AC012065.4-201ENST00000602445 679 ntBASIC1.61□□□□□ -2.15
CCDC59Q9P031 SNRPGP19-201ENST00000603826 189 ntBASIC1.61□□□□□ -2.15
CCDC59Q9P031 AC108479.2-201ENST00000617314 601 ntBASIC1.61□□□□□ -2.15
CCDC59Q9P031 AC026585.1-201ENST00000619582 524 ntBASIC1.61□□□□□ -2.15
CCDC59Q9P031 AL359740.1-201ENST00000624340 592 ntBASIC1.61□□□□□ -2.15
CCDC59Q9P031 AC019226.2-201ENST00000625973 424 ntBASIC1.61□□□□□ -2.15
CCDC59Q9P031 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
CCDC59Q9P031 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.61□□□□□ -2.15
CCDC59Q9P031 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
CCDC59Q9P031 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC1.6□□□□□ -2.15
CCDC59Q9P031 C1DP2-201ENST00000418167 426 ntBASIC1.6□□□□□ -2.15
CCDC59Q9P031 MTCYBP5-201ENST00000423752 1135 ntBASIC1.6□□□□□ -2.15
CCDC59Q9P031 USP9YP18-201ENST00000425912 695 ntBASIC1.6□□□□□ -2.15
CCDC59Q9P031 TOMM20P4-201ENST00000427861 435 ntBASIC1.6□□□□□ -2.15
CCDC59Q9P031 HMGN2P3-201ENST00000433603 273 ntBASIC1.6□□□□□ -2.15
CCDC59Q9P031 HMGN2P5-201ENST00000436882 273 ntBASIC1.6□□□□□ -2.15
CCDC59Q9P031 MTND2P29-201ENST00000438595 412 ntBASIC1.6□□□□□ -2.15
CCDC59Q9P031 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC1.6□□□□□ -2.15
CCDC59Q9P031 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC1.6□□□□□ -2.15
CCDC59Q9P031 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC1.6□□□□□ -2.15
CCDC59Q9P031 AC126389.1-201ENST00000477436 290 ntBASIC1.6□□□□□ -2.15
CCDC59Q9P031 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC1.6□□□□□ -2.15
CCDC59Q9P031 MTCO3P9-201ENST00000506989 781 ntBASIC1.6□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 121.7 ms