Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 AC003071.1-201ENST00000451219 789 ntBASIC1.1□□□□□ -2.23
CISHQ9NSE2 SNORD97-201ENST00000459187 142 ntBASIC1.1□□□□□ -2.23
CISHQ9NSE2 HMGN1P7-201ENST00000491722 313 ntBASIC1.1□□□□□ -2.23
CISHQ9NSE2 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC1.1□□□□□ -2.23
CISHQ9NSE2 RNU2-53P-201ENST00000516257 147 ntBASIC1.1□□□□□ -2.23
CISHQ9NSE2 SNORA31.19-201ENST00000517079 126 ntBASIC1.1□□□□□ -2.23
CISHQ9NSE2 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC1.1□□□□□ -2.23
CISHQ9NSE2 COPS8P3-201ENST00000526024 482 ntBASIC1.1□□□□□ -2.23
CISHQ9NSE2 AP003034.1-201ENST00000534621 422 ntBASIC1.1□□□□□ -2.23
CISHQ9NSE2 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC1.1□□□□□ -2.23
CISHQ9NSE2 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.1□□□□□ -2.23
CISHQ9NSE2 AP001981.2-201ENST00000603241 418 ntBASIC1.1□□□□□ -2.23
CISHQ9NSE2 AL132822.1-201ENST00000617063 513 ntBASIC1.1□□□□□ -2.23
CISHQ9NSE2 USP12-203ENST00000620323 349 ntTSL 3 BASIC1.1□□□□□ -2.23
CISHQ9NSE2 RBBP8P1-201ENST00000449447 1844 ntBASIC1.1□□□□□ -2.23
CISHQ9NSE2 HAUS6P2-201ENST00000433254 2404 ntBASIC1.09□□□□□ -2.23
CISHQ9NSE2 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC1.09□□□□□ -2.23
CISHQ9NSE2 CBX3P1-201ENST00000325243 554 ntBASIC1.09□□□□□ -2.23
CISHQ9NSE2 RNU6-487P-201ENST00000365430 104 ntBASIC1.09□□□□□ -2.23
CISHQ9NSE2 RNU6-439P-201ENST00000384188 106 ntBASIC1.09□□□□□ -2.23
CISHQ9NSE2 SNORA40C-201ENST00000391285 128 ntBASIC1.09□□□□□ -2.23
CISHQ9NSE2 FTH1P15-201ENST00000406984 280 ntBASIC1.09□□□□□ -2.23
CISHQ9NSE2 RNA5SP100-201ENST00000410903 110 ntBASIC1.09□□□□□ -2.23
CISHQ9NSE2 RNA5SP59-201ENST00000410922 110 ntBASIC1.09□□□□□ -2.23
CISHQ9NSE2 AL359704.1-201ENST00000411586 781 ntBASIC1.09□□□□□ -2.23
CISHQ9NSE2 AC138623.1-201ENST00000418060 216 ntBASIC1.09□□□□□ -2.23
CISHQ9NSE2 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC1.09□□□□□ -2.23
CISHQ9NSE2 AC092648.1-201ENST00000425870 423 ntBASIC1.09□□□□□ -2.23
CISHQ9NSE2 USP9YP11-201ENST00000427537 717 ntBASIC1.09□□□□□ -2.23
CISHQ9NSE2 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC1.09□□□□□ -2.23
CISHQ9NSE2 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1.09□□□□□ -2.23
CISHQ9NSE2 FTH1P25-201ENST00000447665 469 ntBASIC1.09□□□□□ -2.23
CISHQ9NSE2 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC1.09□□□□□ -2.23
CISHQ9NSE2 RPS3AP22-201ENST00000488297 769 ntBASIC1.09□□□□□ -2.23
CISHQ9NSE2 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1.09□□□□□ -2.23
CISHQ9NSE2 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.09□□□□□ -2.23
CISHQ9NSE2 RN7SKP256-201ENST00000517201 314 ntBASIC1.09□□□□□ -2.23
CISHQ9NSE2 AP003392.2-201ENST00000527269 208 ntBASIC1.09□□□□□ -2.23
CISHQ9NSE2 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC1.09□□□□□ -2.23
CISHQ9NSE2 AC022616.8-201ENST00000533569 253 ntBASIC1.09□□□□□ -2.23
CISHQ9NSE2 AC018630.3-201ENST00000542637 96 ntBASIC1.09□□□□□ -2.23
CISHQ9NSE2 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.09□□□□□ -2.23
CISHQ9NSE2 BNIP3P27-201ENST00000599991 412 ntBASIC1.09□□□□□ -2.23
CISHQ9NSE2 CLIC4P2-201ENST00000601934 717 ntBASIC1.09□□□□□ -2.23
CISHQ9NSE2 AL358072.1-201ENST00000604156 575 ntBASIC1.09□□□□□ -2.23
CISHQ9NSE2 AL022345.1-201ENST00000607292 135 ntBASIC1.09□□□□□ -2.23
CISHQ9NSE2 AC093788.1-201ENST00000609356 927 ntBASIC1.09□□□□□ -2.23
CISHQ9NSE2 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.09□□□□□ -2.23
CISHQ9NSE2 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.09□□□□□ -2.23
CISHQ9NSE2 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.09□□□□□ -2.23
CISHQ9NSE2 MIR3529-201ENST00000637713 78 ntBASIC1.09□□□□□ -2.23
CISHQ9NSE2 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.09□□□□□ -2.23
CISHQ9NSE2 FARSBP1-201ENST00000435808 1778 ntBASIC1.08□□□□□ -2.24
CISHQ9NSE2 RNY1P10-201ENST00000363268 113 ntBASIC1.08□□□□□ -2.24
CISHQ9NSE2 RNU6-1274P-201ENST00000384557 107 ntBASIC1.08□□□□□ -2.24
CISHQ9NSE2 MIR150-201ENST00000385048 84 ntBASIC1.08□□□□□ -2.24
CISHQ9NSE2 SNORA48.1-201ENST00000390879 135 ntBASIC1.08□□□□□ -2.24
CISHQ9NSE2 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC1.08□□□□□ -2.24
CISHQ9NSE2 USP9YP18-201ENST00000425912 695 ntBASIC1.08□□□□□ -2.24
CISHQ9NSE2 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC1.08□□□□□ -2.24
CISHQ9NSE2 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC1.08□□□□□ -2.24
CISHQ9NSE2 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC1.08□□□□□ -2.24
CISHQ9NSE2 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC1.08□□□□□ -2.24
CISHQ9NSE2 MTCO1P27-201ENST00000448269 226 ntBASIC1.08□□□□□ -2.24
CISHQ9NSE2 RNU6-953P-201ENST00000459154 107 ntBASIC1.08□□□□□ -2.24
CISHQ9NSE2 TOMM22P6-201ENST00000465035 409 ntBASIC1.08□□□□□ -2.24
CISHQ9NSE2 MED28P2-201ENST00000475771 317 ntBASIC1.08□□□□□ -2.24
CISHQ9NSE2 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC1.08□□□□□ -2.24
CISHQ9NSE2 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC1.08□□□□□ -2.24
CISHQ9NSE2 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
CISHQ9NSE2 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC1.08□□□□□ -2.24
CISHQ9NSE2 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC1.08□□□□□ -2.24
CISHQ9NSE2 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC1.08□□□□□ -2.24
CISHQ9NSE2 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.08□□□□□ -2.24
CISHQ9NSE2 RNA5SP216-201ENST00000516111 123 ntBASIC1.08□□□□□ -2.24
CISHQ9NSE2 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC1.08□□□□□ -2.24
CISHQ9NSE2 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.08□□□□□ -2.24
CISHQ9NSE2 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC1.08□□□□□ -2.24
CISHQ9NSE2 WISP1-OT1-201ENST00000602893 642 ntBASIC1.08□□□□□ -2.24
CISHQ9NSE2 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.08□□□□□ -2.24
CISHQ9NSE2 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC1.08□□□□□ -2.24
CISHQ9NSE2 uc_338.15-201ENST00000615470 191 ntBASIC1.08□□□□□ -2.24
CISHQ9NSE2 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC1.08□□□□□ -2.24
CISHQ9NSE2 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.08□□□□□ -2.24
CISHQ9NSE2 RNU6-777P-201ENST00000364265 104 ntBASIC1.07□□□□□ -2.24
CISHQ9NSE2 SNORA62.1-201ENST00000364287 154 ntBASIC1.07□□□□□ -2.24
CISHQ9NSE2 RNU4-38P-201ENST00000364472 129 ntBASIC1.07□□□□□ -2.24
CISHQ9NSE2 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.07□□□□□ -2.24
CISHQ9NSE2 RN7SKP266-201ENST00000410232 287 ntBASIC1.07□□□□□ -2.24
CISHQ9NSE2 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC1.07□□□□□ -2.24
CISHQ9NSE2 AC083875.1-201ENST00000419509 405 ntBASIC1.07□□□□□ -2.24
CISHQ9NSE2 AC013262.1-201ENST00000426710 252 ntBASIC1.07□□□□□ -2.24
CISHQ9NSE2 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
CISHQ9NSE2 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.07□□□□□ -2.24
CISHQ9NSE2 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC1.07□□□□□ -2.24
CISHQ9NSE2 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC1.07□□□□□ -2.24
CISHQ9NSE2 AC136618.2-201ENST00000575091 400 ntBASIC1.07□□□□□ -2.24
CISHQ9NSE2 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC1.07□□□□□ -2.24
CISHQ9NSE2 AC008507.2-201ENST00000588402 1176 ntBASIC1.07□□□□□ -2.24
CISHQ9NSE2 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC1.07□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 199.4 ms