Protein–RNA interactions for Protein: Q9NNX9

VCX3A, Variable charge X-linked protein 3, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3AQ9NNX9 MTCYBP5-201ENST00000423752 1135 ntBASIC1.38□□□□□ -2.19
VCX3AQ9NNX9 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC1.38□□□□□ -2.19
VCX3AQ9NNX9 AL035407.1-201ENST00000429211 571 ntBASIC1.38□□□□□ -2.19
VCX3AQ9NNX9 AL121601.2-201ENST00000438019 707 ntBASIC1.38□□□□□ -2.19
VCX3AQ9NNX9 HMGB1P18-201ENST00000438801 619 ntBASIC1.38□□□□□ -2.19
VCX3AQ9NNX9 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC1.38□□□□□ -2.19
VCX3AQ9NNX9 RPL30P12-201ENST00000474666 353 ntBASIC1.38□□□□□ -2.19
VCX3AQ9NNX9 AC004924.1-201ENST00000480160 781 ntBASIC1.38□□□□□ -2.19
VCX3AQ9NNX9 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC1.38□□□□□ -2.19
VCX3AQ9NNX9 AC009646.1-201ENST00000510455 318 ntBASIC1.38□□□□□ -2.19
VCX3AQ9NNX9 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.38□□□□□ -2.19
VCX3AQ9NNX9 RNA5SP182-201ENST00000516064 82 ntBASIC1.38□□□□□ -2.19
VCX3AQ9NNX9 RNA5SP61-201ENST00000516453 100 ntBASIC1.38□□□□□ -2.19
VCX3AQ9NNX9 SNORA43.2-201ENST00000516652 128 ntBASIC1.38□□□□□ -2.19
VCX3AQ9NNX9 SNORA44.1-201ENST00000517031 108 ntBASIC1.38□□□□□ -2.19
VCX3AQ9NNX9 AC105185.1-201ENST00000518705 535 ntBASIC1.38□□□□□ -2.19
VCX3AQ9NNX9 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC1.38□□□□□ -2.19
VCX3AQ9NNX9 BNIP3P6-201ENST00000549284 499 ntBASIC1.38□□□□□ -2.19
VCX3AQ9NNX9 MIR3118-1-201ENST00000581787 76 ntBASIC1.38□□□□□ -2.19
VCX3AQ9NNX9 BNIP3P40-201ENST00000596017 556 ntBASIC1.38□□□□□ -2.19
VCX3AQ9NNX9 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC1.38□□□□□ -2.19
VCX3AQ9NNX9 AL139418.1-201ENST00000613613 177 ntBASIC1.38□□□□□ -2.19
VCX3AQ9NNX9 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.38□□□□□ -2.19
VCX3AQ9NNX9 AC103706.2-201ENST00000638080 240 ntBASIC1.38□□□□□ -2.19
VCX3AQ9NNX9 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
VCX3AQ9NNX9 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC1.37□□□□□ -2.19
VCX3AQ9NNX9 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
VCX3AQ9NNX9 RNU6-384P-201ENST00000364900 104 ntBASIC1.37□□□□□ -2.19
VCX3AQ9NNX9 RNU6-636P-201ENST00000384598 107 ntBASIC1.37□□□□□ -2.19
VCX3AQ9NNX9 MIR23B-201ENST00000384832 97 ntBASIC1.37□□□□□ -2.19
VCX3AQ9NNX9 RNA5SP171-201ENST00000391071 115 ntBASIC1.37□□□□□ -2.19
VCX3AQ9NNX9 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC1.37□□□□□ -2.19
VCX3AQ9NNX9 RPS15AP12-201ENST00000419498 388 ntBASIC1.37□□□□□ -2.19
VCX3AQ9NNX9 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC1.37□□□□□ -2.19
VCX3AQ9NNX9 RPS15AP10-201ENST00000432472 382 ntBASIC1.37□□□□□ -2.19
VCX3AQ9NNX9 KRTAP19-11P-201ENST00000439851 104 ntBASIC1.37□□□□□ -2.19
VCX3AQ9NNX9 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC1.37□□□□□ -2.19
VCX3AQ9NNX9 AC092436.1-201ENST00000506450 503 ntBASIC1.37□□□□□ -2.19
VCX3AQ9NNX9 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC1.37□□□□□ -2.19
VCX3AQ9NNX9 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC1.37□□□□□ -2.19
VCX3AQ9NNX9 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC1.37□□□□□ -2.19
VCX3AQ9NNX9 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC1.37□□□□□ -2.19
VCX3AQ9NNX9 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC1.37□□□□□ -2.19
VCX3AQ9NNX9 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
VCX3AQ9NNX9 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC1.37□□□□□ -2.19
VCX3AQ9NNX9 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.37□□□□□ -2.19
VCX3AQ9NNX9 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.37□□□□□ -2.19
VCX3AQ9NNX9 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC1.37□□□□□ -2.19
VCX3AQ9NNX9 AL158032.1-201ENST00000605401 106 ntBASIC1.37□□□□□ -2.19
VCX3AQ9NNX9 AC116312.1-201ENST00000606841 314 ntBASIC1.37□□□□□ -2.19
VCX3AQ9NNX9 AL157392.4-201ENST00000609756 345 ntBASIC1.37□□□□□ -2.19
VCX3AQ9NNX9 AL159153.1-201ENST00000619688 317 ntBASIC1.37□□□□□ -2.19
VCX3AQ9NNX9 MIR7843-201ENST00000622274 79 ntBASIC1.37□□□□□ -2.19
VCX3AQ9NNX9 CBX3P1-201ENST00000325243 554 ntBASIC1.36□□□□□ -2.19
VCX3AQ9NNX9 SNORD56.1-201ENST00000362913 68 ntBASIC1.36□□□□□ -2.19
VCX3AQ9NNX9 RNU6-23P-201ENST00000363283 107 ntBASIC1.36□□□□□ -2.19
VCX3AQ9NNX9 RNA5SP493-201ENST00000364115 91 ntBASIC1.36□□□□□ -2.19
VCX3AQ9NNX9 MIR578-201ENST00000384828 96 ntBASIC1.36□□□□□ -2.19
VCX3AQ9NNX9 AL031779.1-201ENST00000415663 330 ntBASIC1.36□□□□□ -2.19
VCX3AQ9NNX9 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC1.36□□□□□ -2.19
VCX3AQ9NNX9 MTND1P20-201ENST00000430341 950 ntBASIC1.36□□□□□ -2.19
VCX3AQ9NNX9 ZNF736P1Y-201ENST00000440402 1276 ntBASIC1.36□□□□□ -2.19
VCX3AQ9NNX9 GDI2P2-201ENST00000445131 608 ntBASIC1.36□□□□□ -2.19
VCX3AQ9NNX9 AL031313.1-201ENST00000448435 256 ntBASIC1.36□□□□□ -2.19
VCX3AQ9NNX9 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC1.36□□□□□ -2.19
VCX3AQ9NNX9 NDUFAF4P3-201ENST00000456468 525 ntBASIC1.36□□□□□ -2.19
VCX3AQ9NNX9 AC010409.1-201ENST00000487382 476 ntBASIC1.36□□□□□ -2.19
VCX3AQ9NNX9 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.36□□□□□ -2.19
VCX3AQ9NNX9 RN7SKP179-201ENST00000516126 217 ntBASIC1.36□□□□□ -2.19
VCX3AQ9NNX9 SNORA31.17-201ENST00000516953 127 ntBASIC1.36□□□□□ -2.19
VCX3AQ9NNX9 AC022616.6-201ENST00000520479 119 ntBASIC1.36□□□□□ -2.19
VCX3AQ9NNX9 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC1.36□□□□□ -2.19
VCX3AQ9NNX9 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.36□□□□□ -2.19
VCX3AQ9NNX9 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC1.36□□□□□ -2.19
VCX3AQ9NNX9 MIR502-201ENST00000606349 86 ntBASIC1.36□□□□□ -2.19
VCX3AQ9NNX9 AL359547.2-201ENST00000615810 418 ntBASIC1.36□□□□□ -2.19
VCX3AQ9NNX9 AC084768.2-201ENST00000622736 221 ntBASIC1.36□□□□□ -2.19
VCX3AQ9NNX9 OR4G3P-201ENST00000633500 913 ntBASIC1.36□□□□□ -2.19
VCX3AQ9NNX9 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.36□□□□□ -2.19
VCX3AQ9NNX9 AL136360.1-201ENST00000503377 1900 ntBASIC1.36□□□□□ -2.19
VCX3AQ9NNX9 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.36□□□□□ -2.19
VCX3AQ9NNX9 ATP8A2P3-201ENST00000426792 1536 ntBASIC1.35□□□□□ -2.19
VCX3AQ9NNX9 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.35□□□□□ -2.19
VCX3AQ9NNX9 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.35□□□□□ -2.19
VCX3AQ9NNX9 OR4G2P-201ENST00000328113 903 ntBASIC1.35□□□□□ -2.19
VCX3AQ9NNX9 RNU6-661P-201ENST00000362409 107 ntBASIC1.35□□□□□ -2.19
VCX3AQ9NNX9 Y_RNA.97-201ENST00000363094 102 ntBASIC1.35□□□□□ -2.19
VCX3AQ9NNX9 SNORA80A-201ENST00000363922 136 ntBASIC1.35□□□□□ -2.19
VCX3AQ9NNX9 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.35□□□□□ -2.19
VCX3AQ9NNX9 RPS3AP36-201ENST00000398190 775 ntBASIC1.35□□□□□ -2.19
VCX3AQ9NNX9 RPL22P18-201ENST00000417197 377 ntBASIC1.35□□□□□ -2.19
VCX3AQ9NNX9 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC1.35□□□□□ -2.19
VCX3AQ9NNX9 AC092648.1-201ENST00000425870 423 ntBASIC1.35□□□□□ -2.19
VCX3AQ9NNX9 AL035666.1-201ENST00000446195 348 ntBASIC1.35□□□□□ -2.19
VCX3AQ9NNX9 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC1.35□□□□□ -2.19
VCX3AQ9NNX9 AL353705.4-201ENST00000449661 238 ntBASIC1.35□□□□□ -2.19
VCX3AQ9NNX9 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC1.35□□□□□ -2.19
VCX3AQ9NNX9 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC1.35□□□□□ -2.19
VCX3AQ9NNX9 RPL30P1-201ENST00000488676 339 ntBASIC1.35□□□□□ -2.19
VCX3AQ9NNX9 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC1.35□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms