Protein–RNA interactions for Protein: Q9H3M9

ATXN3L, Ataxin-3-like protein, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3LQ9H3M9 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
ATXN3LQ9H3M9 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
ATXN3LQ9H3M9 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
ATXN3LQ9H3M9 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.23□□□□□ -1.73
ATXN3LQ9H3M9 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
ATXN3LQ9H3M9 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.23□□□□□ -1.73
ATXN3LQ9H3M9 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
ATXN3LQ9H3M9 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC4.23□□□□□ -1.73
ATXN3LQ9H3M9 RNU6-740P-201ENST00000364734 105 ntBASIC4.23□□□□□ -1.73
ATXN3LQ9H3M9 RNU6-47P-201ENST00000383866 107 ntBASIC4.23□□□□□ -1.73
ATXN3LQ9H3M9 Y_RNA.504-201ENST00000384481 104 ntBASIC4.23□□□□□ -1.73
ATXN3LQ9H3M9 UBA52P6-201ENST00000399822 382 ntBASIC4.23□□□□□ -1.73
ATXN3LQ9H3M9 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
ATXN3LQ9H3M9 EIF1P2-201ENST00000428233 350 ntBASIC4.23□□□□□ -1.73
ATXN3LQ9H3M9 AP000907.1-201ENST00000428428 510 ntBASIC4.23□□□□□ -1.73
ATXN3LQ9H3M9 AL445584.1-201ENST00000431451 330 ntBASIC4.23□□□□□ -1.73
ATXN3LQ9H3M9 TBCAP1-201ENST00000436520 327 ntBASIC4.23□□□□□ -1.73
ATXN3LQ9H3M9 SNRPEP9-201ENST00000436794 238 ntBASIC4.23□□□□□ -1.73
ATXN3LQ9H3M9 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
ATXN3LQ9H3M9 AP000870.1-201ENST00000472927 406 ntBASIC4.23□□□□□ -1.73
ATXN3LQ9H3M9 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC4.23□□□□□ -1.73
ATXN3LQ9H3M9 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC4.23□□□□□ -1.73
ATXN3LQ9H3M9 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.23□□□□□ -1.73
ATXN3LQ9H3M9 TRAV28-201ENST00000557548 323 ntBASIC4.23□□□□□ -1.73
ATXN3LQ9H3M9 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC4.23□□□□□ -1.73
ATXN3LQ9H3M9 AC136601.2-201ENST00000604356 474 ntBASIC4.23□□□□□ -1.73
ATXN3LQ9H3M9 MIR432-201ENST00000606207 94 ntBASIC4.23□□□□□ -1.73
ATXN3LQ9H3M9 AL354798.1-201ENST00000622505 329 ntBASIC4.23□□□□□ -1.73
ATXN3LQ9H3M9 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC4.23□□□□□ -1.73
ATXN3LQ9H3M9 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
ATXN3LQ9H3M9 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
ATXN3LQ9H3M9 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
ATXN3LQ9H3M9 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC4.23□□□□□ -1.73
ATXN3LQ9H3M9 ZNF962P-201ENST00000443465 3140 ntBASIC4.23□□□□□ -1.73
ATXN3LQ9H3M9 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
ATXN3LQ9H3M9 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
ATXN3LQ9H3M9 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
ATXN3LQ9H3M9 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
ATXN3LQ9H3M9 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
ATXN3LQ9H3M9 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.22□□□□□ -1.73
ATXN3LQ9H3M9 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.22□□□□□ -1.73
ATXN3LQ9H3M9 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
ATXN3LQ9H3M9 RNU6-858P-201ENST00000362436 107 ntBASIC4.22□□□□□ -1.73
ATXN3LQ9H3M9 RNA5SP361-201ENST00000362686 118 ntBASIC4.22□□□□□ -1.73
ATXN3LQ9H3M9 RNY4P28-201ENST00000365281 93 ntBASIC4.22□□□□□ -1.73
ATXN3LQ9H3M9 RNU6-213P-201ENST00000384051 104 ntBASIC4.22□□□□□ -1.73
ATXN3LQ9H3M9 RNA5SP44-201ENST00000410446 133 ntBASIC4.22□□□□□ -1.73
ATXN3LQ9H3M9 RNU6-651P-201ENST00000411040 105 ntBASIC4.22□□□□□ -1.73
ATXN3LQ9H3M9 AC124916.1-201ENST00000444020 547 ntBASIC4.22□□□□□ -1.73
ATXN3LQ9H3M9 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC4.22□□□□□ -1.73
ATXN3LQ9H3M9 snoU13.4-201ENST00000458916 104 ntBASIC4.22□□□□□ -1.73
ATXN3LQ9H3M9 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.22□□□□□ -1.73
ATXN3LQ9H3M9 UBE2CP3-201ENST00000502715 450 ntBASIC4.22□□□□□ -1.73
ATXN3LQ9H3M9 SNORA43.2-201ENST00000516652 128 ntBASIC4.22□□□□□ -1.73
ATXN3LQ9H3M9 RNU7-143P-201ENST00000516781 65 ntBASIC4.22□□□□□ -1.73
ATXN3LQ9H3M9 MIR4782-201ENST00000577987 79 ntBASIC4.22□□□□□ -1.73
ATXN3LQ9H3M9 Z83818.1-201ENST00000603584 150 ntBASIC4.22□□□□□ -1.73
ATXN3LQ9H3M9 SNORD113-5-201ENST00000607261 78 ntBASIC4.22□□□□□ -1.73
ATXN3LQ9H3M9 RMST_6.1-201ENST00000611980 203 ntBASIC4.22□□□□□ -1.73
ATXN3LQ9H3M9 MIR7702-201ENST00000621931 59 ntBASIC4.22□□□□□ -1.73
ATXN3LQ9H3M9 CR392039.5-201ENST00000623201 510 ntBASIC4.22□□□□□ -1.73
ATXN3LQ9H3M9 AC021753.1-201ENST00000635724 168 ntBASIC4.22□□□□□ -1.73
ATXN3LQ9H3M9 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
ATXN3LQ9H3M9 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
ATXN3LQ9H3M9 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC4.22□□□□□ -1.73
ATXN3LQ9H3M9 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC4.22□□□□□ -1.73
ATXN3LQ9H3M9 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
ATXN3LQ9H3M9 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
ATXN3LQ9H3M9 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
ATXN3LQ9H3M9 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4.21□□□□□ -1.73
ATXN3LQ9H3M9 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
ATXN3LQ9H3M9 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
ATXN3LQ9H3M9 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
ATXN3LQ9H3M9 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
ATXN3LQ9H3M9 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
ATXN3LQ9H3M9 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
ATXN3LQ9H3M9 AL079305.1-201ENST00000623159 3008 ntBASIC4.21□□□□□ -1.74
ATXN3LQ9H3M9 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
ATXN3LQ9H3M9 RNU1-108P-201ENST00000362556 161 ntBASIC4.21□□□□□ -1.74
ATXN3LQ9H3M9 Y_RNA.292-201ENST00000364904 97 ntBASIC4.21□□□□□ -1.74
ATXN3LQ9H3M9 RNA5SP240-201ENST00000365355 128 ntBASIC4.21□□□□□ -1.74
ATXN3LQ9H3M9 RFX3-203ENST00000381984 364 ntTSL 3 BASIC4.21□□□□□ -1.74
ATXN3LQ9H3M9 RNA5SP171-201ENST00000391071 115 ntBASIC4.21□□□□□ -1.74
ATXN3LQ9H3M9 RPS4XP3-201ENST00000398541 413 ntBASIC4.21□□□□□ -1.74
ATXN3LQ9H3M9 SNORD12B-201ENST00000410433 91 ntBASIC4.21□□□□□ -1.74
ATXN3LQ9H3M9 RNA5SP31-201ENST00000411144 127 ntBASIC4.21□□□□□ -1.74
ATXN3LQ9H3M9 RAB9AP3-201ENST00000412737 573 ntBASIC4.21□□□□□ -1.74
ATXN3LQ9H3M9 AL590383.1-201ENST00000428602 75 ntBASIC4.21□□□□□ -1.74
ATXN3LQ9H3M9 RAB9AP1-201ENST00000449393 573 ntBASIC4.21□□□□□ -1.74
ATXN3LQ9H3M9 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC4.21□□□□□ -1.74
ATXN3LQ9H3M9 AC109925.1-201ENST00000478069 331 ntBASIC4.21□□□□□ -1.74
ATXN3LQ9H3M9 AF186996.7-201ENST00000492781 209 ntBASIC4.21□□□□□ -1.74
ATXN3LQ9H3M9 BTF3L4P4-201ENST00000506381 449 ntBASIC4.21□□□□□ -1.74
ATXN3LQ9H3M9 AC091874.1-201ENST00000511402 339 ntBASIC4.21□□□□□ -1.74
ATXN3LQ9H3M9 RNU6-1278P-201ENST00000516130 107 ntBASIC4.21□□□□□ -1.74
ATXN3LQ9H3M9 RNU2-31P-201ENST00000516954 155 ntBASIC4.21□□□□□ -1.74
ATXN3LQ9H3M9 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.21□□□□□ -1.74
ATXN3LQ9H3M9 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC4.21□□□□□ -1.74
ATXN3LQ9H3M9 AL162424.1-201ENST00000602325 221 ntBASIC4.21□□□□□ -1.74
ATXN3LQ9H3M9 UBE2Q2P6-201ENST00000612666 153 ntBASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 88.7 ms