Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 AC138393.1-203ENST00000327086 343 ntBASIC1.17□□□□□ -2.22
TRIM4Q9C037 RNU6-354P-201ENST00000383862 107 ntBASIC1.17□□□□□ -2.22
TRIM4Q9C037 RNU6-439P-201ENST00000384188 106 ntBASIC1.17□□□□□ -2.22
TRIM4Q9C037 RNU6-610P-201ENST00000384264 107 ntBASIC1.17□□□□□ -2.22
TRIM4Q9C037 SNORD14D-201ENST00000384390 87 ntBASIC1.17□□□□□ -2.22
TRIM4Q9C037 MIR222-201ENST00000384992 110 ntBASIC1.17□□□□□ -2.22
TRIM4Q9C037 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC1.17□□□□□ -2.22
TRIM4Q9C037 RPL21P24-201ENST00000413752 448 ntBASIC1.17□□□□□ -2.22
TRIM4Q9C037 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC1.17□□□□□ -2.22
TRIM4Q9C037 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC1.17□□□□□ -2.22
TRIM4Q9C037 MTND1P31-201ENST00000449206 961 ntBASIC1.17□□□□□ -2.22
TRIM4Q9C037 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC1.17□□□□□ -2.22
TRIM4Q9C037 AL590365.1-201ENST00000450788 243 ntBASIC1.17□□□□□ -2.22
TRIM4Q9C037 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC1.17□□□□□ -2.22
TRIM4Q9C037 PRELID3BP1-201ENST00000457142 540 ntBASIC1.17□□□□□ -2.22
TRIM4Q9C037 AC023194.1-201ENST00000493084 308 ntBASIC1.17□□□□□ -2.22
TRIM4Q9C037 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC1.17□□□□□ -2.22
TRIM4Q9C037 UTP23-205ENST00000520733 369 ntTSL 3 BASIC1.17□□□□□ -2.22
TRIM4Q9C037 MTCO3P15-201ENST00000526563 574 ntBASIC1.17□□□□□ -2.22
TRIM4Q9C037 AC005832.3-201ENST00000537929 631 ntBASIC1.17□□□□□ -2.22
TRIM4Q9C037 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC1.17□□□□□ -2.22
TRIM4Q9C037 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.17□□□□□ -2.22
TRIM4Q9C037 AC079148.1-201ENST00000565944 819 ntBASIC1.17□□□□□ -2.22
TRIM4Q9C037 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.17□□□□□ -2.22
TRIM4Q9C037 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC1.17□□□□□ -2.22
TRIM4Q9C037 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.17□□□□□ -2.22
TRIM4Q9C037 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
TRIM4Q9C037 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.16□□□□□ -2.22
TRIM4Q9C037 DLEU2_6.3-201ENST00000340052 136 ntBASIC1.16□□□□□ -2.22
TRIM4Q9C037 RNU6-1164P-201ENST00000364428 107 ntBASIC1.16□□□□□ -2.22
TRIM4Q9C037 AL079342.2-201ENST00000403367 482 ntBASIC1.16□□□□□ -2.22
TRIM4Q9C037 RNU2-36P-201ENST00000410361 191 ntBASIC1.16□□□□□ -2.22
TRIM4Q9C037 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC1.16□□□□□ -2.22
TRIM4Q9C037 AL596276.1-201ENST00000434465 418 ntBASIC1.16□□□□□ -2.22
TRIM4Q9C037 MTND5P14-201ENST00000441481 1267 ntBASIC1.16□□□□□ -2.22
TRIM4Q9C037 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1.16□□□□□ -2.22
TRIM4Q9C037 AC245102.2-201ENST00000448956 180 ntBASIC1.16□□□□□ -2.22
TRIM4Q9C037 RPL18AP17-201ENST00000455326 198 ntBASIC1.16□□□□□ -2.22
TRIM4Q9C037 SNORD97-201ENST00000459187 142 ntBASIC1.16□□□□□ -2.22
TRIM4Q9C037 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC1.16□□□□□ -2.22
TRIM4Q9C037 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC1.16□□□□□ -2.22
TRIM4Q9C037 MTCYBP43-201ENST00000513621 740 ntBASIC1.16□□□□□ -2.22
TRIM4Q9C037 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC1.16□□□□□ -2.22
TRIM4Q9C037 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC1.16□□□□□ -2.22
TRIM4Q9C037 AC093012.1-202ENST00000549403 582 ntBASIC1.16□□□□□ -2.22
TRIM4Q9C037 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC1.16□□□□□ -2.22
TRIM4Q9C037 SUB1P4-201ENST00000566062 339 ntBASIC1.16□□□□□ -2.22
TRIM4Q9C037 AC093249.1-201ENST00000567049 203 ntBASIC1.16□□□□□ -2.22
TRIM4Q9C037 MIR5708-201ENST00000579723 85 ntBASIC1.16□□□□□ -2.22
TRIM4Q9C037 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC1.16□□□□□ -2.22
TRIM4Q9C037 DLEU2_6.2-201ENST00000620994 136 ntBASIC1.16□□□□□ -2.22
TRIM4Q9C037 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
TRIM4Q9C037 UBE2Q2P1-202ENST00000354771 883 ntBASIC1.15□□□□□ -2.23
TRIM4Q9C037 RNU1-58P-201ENST00000362413 163 ntBASIC1.15□□□□□ -2.23
TRIM4Q9C037 Y_RNA.67-201ENST00000362870 100 ntBASIC1.15□□□□□ -2.23
TRIM4Q9C037 RNU6-898P-201ENST00000365627 104 ntBASIC1.15□□□□□ -2.23
TRIM4Q9C037 RNU6-207P-201ENST00000384137 107 ntBASIC1.15□□□□□ -2.23
TRIM4Q9C037 RNU6-611P-201ENST00000384276 104 ntBASIC1.15□□□□□ -2.23
TRIM4Q9C037 AC068533.2-201ENST00000411872 306 ntBASIC1.15□□□□□ -2.23
TRIM4Q9C037 AC104651.1-201ENST00000427559 735 ntBASIC1.15□□□□□ -2.23
TRIM4Q9C037 AL354941.1-201ENST00000438600 464 ntBASIC1.15□□□□□ -2.23
TRIM4Q9C037 BRK1P2-201ENST00000442875 223 ntBASIC1.15□□□□□ -2.23
TRIM4Q9C037 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.15□□□□□ -2.23
TRIM4Q9C037 RPS23P4-201ENST00000487908 423 ntBASIC1.15□□□□□ -2.23
TRIM4Q9C037 MTCYBP16-201ENST00000509187 1129 ntBASIC1.15□□□□□ -2.23
TRIM4Q9C037 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC1.15□□□□□ -2.23
TRIM4Q9C037 PTP4A1P4-201ENST00000512479 322 ntBASIC1.15□□□□□ -2.23
TRIM4Q9C037 RNU6-113P-201ENST00000516653 101 ntBASIC1.15□□□□□ -2.23
TRIM4Q9C037 HSPE1P4-201ENST00000550617 308 ntBASIC1.15□□□□□ -2.23
TRIM4Q9C037 MIR5000-201ENST00000577717 103 ntBASIC1.15□□□□□ -2.23
TRIM4Q9C037 MIR4782-201ENST00000577987 79 ntBASIC1.15□□□□□ -2.23
TRIM4Q9C037 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC1.15□□□□□ -2.23
TRIM4Q9C037 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC1.15□□□□□ -2.23
TRIM4Q9C037 BNIP3P27-201ENST00000599991 412 ntBASIC1.15□□□□□ -2.23
TRIM4Q9C037 CYP2C61P-201ENST00000604072 290 ntBASIC1.15□□□□□ -2.23
TRIM4Q9C037 RNU4-91P-201ENST00000364778 135 ntBASIC1.14□□□□□ -2.23
TRIM4Q9C037 MIR193B-201ENST00000384907 83 ntBASIC1.14□□□□□ -2.23
TRIM4Q9C037 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.14□□□□□ -2.23
TRIM4Q9C037 RNA5SP100-201ENST00000410903 110 ntBASIC1.14□□□□□ -2.23
TRIM4Q9C037 RNA5SP59-201ENST00000410922 110 ntBASIC1.14□□□□□ -2.23
TRIM4Q9C037 EBAG9P1-201ENST00000418955 543 ntBASIC1.14□□□□□ -2.23
TRIM4Q9C037 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC1.14□□□□□ -2.23
TRIM4Q9C037 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC1.14□□□□□ -2.23
TRIM4Q9C037 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.14□□□□□ -2.23
TRIM4Q9C037 TRAPPC2P3-201ENST00000443200 321 ntBASIC1.14□□□□□ -2.23
TRIM4Q9C037 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.14□□□□□ -2.23
TRIM4Q9C037 ARL2BPP4-201ENST00000506854 471 ntBASIC1.14□□□□□ -2.23
TRIM4Q9C037 AC008837.2-201ENST00000513076 418 ntBASIC1.14□□□□□ -2.23
TRIM4Q9C037 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.14□□□□□ -2.23
TRIM4Q9C037 COPS8P3-201ENST00000526024 482 ntBASIC1.14□□□□□ -2.23
TRIM4Q9C037 AP003392.2-201ENST00000527269 208 ntBASIC1.14□□□□□ -2.23
TRIM4Q9C037 POC1B-211ENST00000549504 581 ntTSL 5 BASIC1.14□□□□□ -2.23
TRIM4Q9C037 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC1.14□□□□□ -2.23
TRIM4Q9C037 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC1.14□□□□□ -2.23
TRIM4Q9C037 AC136619.2-201ENST00000563361 631 ntBASIC1.14□□□□□ -2.23
TRIM4Q9C037 AL020996.3-201ENST00000606617 222 ntBASIC1.14□□□□□ -2.23
TRIM4Q9C037 AL022345.1-201ENST00000607292 135 ntBASIC1.14□□□□□ -2.23
TRIM4Q9C037 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.14□□□□□ -2.23
TRIM4Q9C037 AL132822.1-201ENST00000617063 513 ntBASIC1.14□□□□□ -2.23
TRIM4Q9C037 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.14□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 120.4 ms