Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC1.44□□□□□ -2.18
UPF3BQ9BZI7 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
UPF3BQ9BZI7 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.44□□□□□ -2.18
UPF3BQ9BZI7 MTCO2P25-201ENST00000447065 681 ntBASIC1.44□□□□□ -2.18
UPF3BQ9BZI7 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC1.44□□□□□ -2.18
UPF3BQ9BZI7 IGHVII-53-1-201ENST00000519538 255 ntBASIC1.44□□□□□ -2.18
UPF3BQ9BZI7 AC023825.1-201ENST00000566704 1030 ntBASIC1.44□□□□□ -2.18
UPF3BQ9BZI7 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC1.44□□□□□ -2.18
UPF3BQ9BZI7 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC1.43□□□□□ -2.18
UPF3BQ9BZI7 SNORD14D-201ENST00000384390 87 ntBASIC1.43□□□□□ -2.18
UPF3BQ9BZI7 RNU11-3P-201ENST00000391111 133 ntBASIC1.43□□□□□ -2.18
UPF3BQ9BZI7 AL133475.1-201ENST00000404414 305 ntBASIC1.43□□□□□ -2.18
UPF3BQ9BZI7 USP9YP21-201ENST00000420603 432 ntBASIC1.43□□□□□ -2.18
UPF3BQ9BZI7 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC1.43□□□□□ -2.18
UPF3BQ9BZI7 BTF3P15-201ENST00000455606 336 ntBASIC1.43□□□□□ -2.18
UPF3BQ9BZI7 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC1.43□□□□□ -2.18
UPF3BQ9BZI7 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC1.43□□□□□ -2.18
UPF3BQ9BZI7 RPL39P36-201ENST00000490784 156 ntBASIC1.43□□□□□ -2.18
UPF3BQ9BZI7 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC1.43□□□□□ -2.18
UPF3BQ9BZI7 RNU6-150P-201ENST00000516237 95 ntBASIC1.43□□□□□ -2.18
UPF3BQ9BZI7 RNU6-143P-201ENST00000516942 93 ntBASIC1.43□□□□□ -2.18
UPF3BQ9BZI7 RNU6-1028P-201ENST00000517164 93 ntBASIC1.43□□□□□ -2.18
UPF3BQ9BZI7 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.43□□□□□ -2.18
UPF3BQ9BZI7 AC008269.2-201ENST00000561915 1105 ntBASIC1.43□□□□□ -2.18
UPF3BQ9BZI7 AL132657.2-201ENST00000564417 358 ntBASIC1.43□□□□□ -2.18
UPF3BQ9BZI7 AC005730.3-201ENST00000583067 366 ntBASIC1.43□□□□□ -2.18
UPF3BQ9BZI7 AC016727.2-201ENST00000603988 621 ntBASIC1.43□□□□□ -2.18
UPF3BQ9BZI7 CYP2C61P-201ENST00000604072 290 ntBASIC1.43□□□□□ -2.18
UPF3BQ9BZI7 AP002802.2-201ENST00000605877 235 ntBASIC1.43□□□□□ -2.18
UPF3BQ9BZI7 AC090970.3-201ENST00000612566 866 ntBASIC1.43□□□□□ -2.18
UPF3BQ9BZI7 AL354696.1-201ENST00000614652 497 ntBASIC1.43□□□□□ -2.18
UPF3BQ9BZI7 AL132822.1-201ENST00000617063 513 ntBASIC1.43□□□□□ -2.18
UPF3BQ9BZI7 AL163152.1-201ENST00000642001 374 ntBASIC1.43□□□□□ -2.18
UPF3BQ9BZI7 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC1.42□□□□□ -2.18
UPF3BQ9BZI7 AC091812.1-201ENST00000432235 1948 ntBASIC1.42□□□□□ -2.18
UPF3BQ9BZI7 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
UPF3BQ9BZI7 RNU1-58P-201ENST00000362413 163 ntBASIC1.42□□□□□ -2.18
UPF3BQ9BZI7 RNU6-487P-201ENST00000365430 104 ntBASIC1.42□□□□□ -2.18
UPF3BQ9BZI7 Y_RNA.408-201ENST00000383987 102 ntBASIC1.42□□□□□ -2.18
UPF3BQ9BZI7 RNU6-1032P-201ENST00000384100 107 ntBASIC1.42□□□□□ -2.18
UPF3BQ9BZI7 RNU6-817P-201ENST00000391083 104 ntBASIC1.42□□□□□ -2.18
UPF3BQ9BZI7 BTF3L4P2-201ENST00000392798 346 ntBASIC1.42□□□□□ -2.18
UPF3BQ9BZI7 RNA5SP501-201ENST00000410990 112 ntBASIC1.42□□□□□ -2.18
UPF3BQ9BZI7 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC1.42□□□□□ -2.18
UPF3BQ9BZI7 AC008267.5-201ENST00000424928 265 ntBASIC1.42□□□□□ -2.18
UPF3BQ9BZI7 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC1.42□□□□□ -2.18
UPF3BQ9BZI7 AL354941.1-201ENST00000438600 464 ntBASIC1.42□□□□□ -2.18
UPF3BQ9BZI7 CALM1P1-201ENST00000442082 433 ntBASIC1.42□□□□□ -2.18
UPF3BQ9BZI7 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC1.42□□□□□ -2.18
UPF3BQ9BZI7 HMGN2P18-201ENST00000450680 270 ntBASIC1.42□□□□□ -2.18
UPF3BQ9BZI7 AC003071.1-201ENST00000451219 789 ntBASIC1.42□□□□□ -2.18
UPF3BQ9BZI7 RNA5SP57-201ENST00000459463 123 ntBASIC1.42□□□□□ -2.18
UPF3BQ9BZI7 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC1.42□□□□□ -2.18
UPF3BQ9BZI7 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.42□□□□□ -2.18
UPF3BQ9BZI7 AC009902.1-201ENST00000519351 183 ntBASIC1.42□□□□□ -2.18
UPF3BQ9BZI7 RRN3P3-201ENST00000549207 578 ntBASIC1.42□□□□□ -2.18
UPF3BQ9BZI7 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC1.42□□□□□ -2.18
UPF3BQ9BZI7 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC1.42□□□□□ -2.18
UPF3BQ9BZI7 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC1.42□□□□□ -2.18
UPF3BQ9BZI7 AP001981.2-201ENST00000603241 418 ntBASIC1.42□□□□□ -2.18
UPF3BQ9BZI7 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.42□□□□□ -2.18
UPF3BQ9BZI7 HAUS6P2-201ENST00000433254 2404 ntBASIC1.42□□□□□ -2.18
UPF3BQ9BZI7 CBX3P1-201ENST00000325243 554 ntBASIC1.41□□□□□ -2.18
UPF3BQ9BZI7 MIR424-201ENST00000362227 98 ntBASIC1.41□□□□□ -2.18
UPF3BQ9BZI7 SNORD115-3-201ENST00000363100 82 ntBASIC1.41□□□□□ -2.18
UPF3BQ9BZI7 RNU6-288P-201ENST00000363690 104 ntBASIC1.41□□□□□ -2.18
UPF3BQ9BZI7 Y_RNA.295-201ENST00000364918 102 ntBASIC1.41□□□□□ -2.18
UPF3BQ9BZI7 MIR19A-201ENST00000384878 82 ntBASIC1.41□□□□□ -2.18
UPF3BQ9BZI7 MIR625-201ENST00000385047 85 ntBASIC1.41□□□□□ -2.18
UPF3BQ9BZI7 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
UPF3BQ9BZI7 MIR1262-201ENST00000408276 93 ntBASIC1.41□□□□□ -2.18
UPF3BQ9BZI7 ZNF736P7Y-201ENST00000425158 820 ntBASIC1.41□□□□□ -2.18
UPF3BQ9BZI7 USP9YP18-201ENST00000425912 695 ntBASIC1.41□□□□□ -2.18
UPF3BQ9BZI7 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC1.41□□□□□ -2.18
UPF3BQ9BZI7 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC1.41□□□□□ -2.18
UPF3BQ9BZI7 MTCO2P20-201ENST00000437339 673 ntBASIC1.41□□□□□ -2.18
UPF3BQ9BZI7 PRELID3BP1-201ENST00000457142 540 ntBASIC1.41□□□□□ -2.18
UPF3BQ9BZI7 LAMTOR3P2-201ENST00000504479 232 ntBASIC1.41□□□□□ -2.18
UPF3BQ9BZI7 PTP4A1P4-201ENST00000512479 322 ntBASIC1.41□□□□□ -2.18
UPF3BQ9BZI7 RN7SKP179-201ENST00000516126 217 ntBASIC1.41□□□□□ -2.18
UPF3BQ9BZI7 AC018630.3-201ENST00000542637 96 ntBASIC1.41□□□□□ -2.18
UPF3BQ9BZI7 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC1.41□□□□□ -2.18
UPF3BQ9BZI7 AL512347.1-201ENST00000566420 503 ntBASIC1.41□□□□□ -2.18
UPF3BQ9BZI7 MIR4422-201ENST00000581938 83 ntBASIC1.41□□□□□ -2.18
UPF3BQ9BZI7 AC073410.2-201ENST00000603240 332 ntBASIC1.41□□□□□ -2.18
UPF3BQ9BZI7 AC083806.3-201ENST00000614016 455 ntBASIC1.41□□□□□ -2.18
UPF3BQ9BZI7 AP003476.1-201ENST00000623984 516 ntBASIC1.41□□□□□ -2.18
UPF3BQ9BZI7 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC1.41□□□□□ -2.18
UPF3BQ9BZI7 AC099654.9-201ENST00000637055 678 ntBASIC1.41□□□□□ -2.18
UPF3BQ9BZI7 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC1.4□□□□□ -2.18
UPF3BQ9BZI7 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC1.4□□□□□ -2.18
UPF3BQ9BZI7 FARSBP1-201ENST00000435808 1778 ntBASIC1.4□□□□□ -2.19
UPF3BQ9BZI7 MTND5P33-201ENST00000571250 1450 ntBASIC1.4□□□□□ -2.19
UPF3BQ9BZI7 RNU6-1164P-201ENST00000364428 107 ntBASIC1.4□□□□□ -2.19
UPF3BQ9BZI7 RNU6-898P-201ENST00000365627 104 ntBASIC1.4□□□□□ -2.19
UPF3BQ9BZI7 RNU6-1105P-201ENST00000384774 107 ntBASIC1.4□□□□□ -2.19
UPF3BQ9BZI7 RNU1-78P-201ENST00000391248 165 ntBASIC1.4□□□□□ -2.19
UPF3BQ9BZI7 AL603865.2-201ENST00000401679 213 ntBASIC1.4□□□□□ -2.19
UPF3BQ9BZI7 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC1.4□□□□□ -2.19
UPF3BQ9BZI7 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC1.4□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 117.7 ms