Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
SSBP3Q9BWW4 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC3.48□□□□□ -1.85
SSBP3Q9BWW4 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC3.48□□□□□ -1.85
SSBP3Q9BWW4 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.47□□□□□ -1.85
SSBP3Q9BWW4 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.47□□□□□ -1.85
SSBP3Q9BWW4 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC3.47□□□□□ -1.85
SSBP3Q9BWW4 RNU6-1290P-201ENST00000362957 109 ntBASIC3.47□□□□□ -1.85
SSBP3Q9BWW4 SNORD74.4-201ENST00000364129 80 ntBASIC3.47□□□□□ -1.85
SSBP3Q9BWW4 RNA5SP513-201ENST00000364648 118 ntBASIC3.47□□□□□ -1.85
SSBP3Q9BWW4 RNU6-923P-201ENST00000364753 107 ntBASIC3.47□□□□□ -1.85
SSBP3Q9BWW4 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC3.47□□□□□ -1.85
SSBP3Q9BWW4 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
SSBP3Q9BWW4 UBA52P6-201ENST00000399822 382 ntBASIC3.47□□□□□ -1.85
SSBP3Q9BWW4 MIR1193-201ENST00000408109 78 ntBASIC3.47□□□□□ -1.85
SSBP3Q9BWW4 SNORD12B-201ENST00000410433 91 ntBASIC3.47□□□□□ -1.85
SSBP3Q9BWW4 RNU6-628P-201ENST00000410675 107 ntBASIC3.47□□□□□ -1.85
SSBP3Q9BWW4 RNA5SP104-201ENST00000410989 118 ntBASIC3.47□□□□□ -1.85
SSBP3Q9BWW4 RPL23AP36-201ENST00000413895 458 ntBASIC3.47□□□□□ -1.85
SSBP3Q9BWW4 BMS1P22-201ENST00000414726 313 ntBASIC3.47□□□□□ -1.85
SSBP3Q9BWW4 AL390729.2-201ENST00000416137 156 ntBASIC3.47□□□□□ -1.85
SSBP3Q9BWW4 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC3.47□□□□□ -1.85
SSBP3Q9BWW4 SETP5-201ENST00000437270 562 ntBASIC3.47□□□□□ -1.85
SSBP3Q9BWW4 AC073901.1-201ENST00000462471 408 ntBASIC3.47□□□□□ -1.85
SSBP3Q9BWW4 AC025445.1-201ENST00000502728 300 ntBASIC3.47□□□□□ -1.85
SSBP3Q9BWW4 SCARNA15.2-201ENST00000516409 127 ntBASIC3.47□□□□□ -1.85
SSBP3Q9BWW4 SNORA27.4-201ENST00000516650 95 ntBASIC3.47□□□□□ -1.85
SSBP3Q9BWW4 IFITM8P-201ENST00000522529 394 ntBASIC3.47□□□□□ -1.85
SSBP3Q9BWW4 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC3.47□□□□□ -1.85
SSBP3Q9BWW4 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC3.47□□□□□ -1.85
SSBP3Q9BWW4 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC3.47□□□□□ -1.85
SSBP3Q9BWW4 AC022655.2-201ENST00000577280 318 ntBASIC3.47□□□□□ -1.85
SSBP3Q9BWW4 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC3.47□□□□□ -1.85
SSBP3Q9BWW4 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC3.47□□□□□ -1.85
SSBP3Q9BWW4 AC004825.2-201ENST00000616634 455 ntBASIC3.47□□□□□ -1.85
SSBP3Q9BWW4 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC3.47□□□□□ -1.85
SSBP3Q9BWW4 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
SSBP3Q9BWW4 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
SSBP3Q9BWW4 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.47□□□□□ -1.85
SSBP3Q9BWW4 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC3.47□□□□□ -1.85
SSBP3Q9BWW4 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
SSBP3Q9BWW4 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
SSBP3Q9BWW4 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.46□□□□□ -1.86
SSBP3Q9BWW4 AL356489.2-201ENST00000566968 3528 ntBASIC3.46□□□□□ -1.86
SSBP3Q9BWW4 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.46□□□□□ -1.86
SSBP3Q9BWW4 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC3.46□□□□□ -1.86
SSBP3Q9BWW4 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.46□□□□□ -1.86
SSBP3Q9BWW4 RNU1-15P-201ENST00000353977 144 ntBASIC3.46□□□□□ -1.86
SSBP3Q9BWW4 RNA5SP479-201ENST00000364858 117 ntBASIC3.46□□□□□ -1.86
SSBP3Q9BWW4 RNU6-318P-201ENST00000384283 103 ntBASIC3.46□□□□□ -1.86
SSBP3Q9BWW4 RNU6-22P-201ENST00000384355 107 ntBASIC3.46□□□□□ -1.86
SSBP3Q9BWW4 RNU6-166P-201ENST00000384371 107 ntBASIC3.46□□□□□ -1.86
SSBP3Q9BWW4 RNU6-1289P-201ENST00000384431 106 ntBASIC3.46□□□□□ -1.86
SSBP3Q9BWW4 RNU1-13P-201ENST00000384499 162 ntBASIC3.46□□□□□ -1.86
SSBP3Q9BWW4 RNU6-417P-201ENST00000384712 107 ntBASIC3.46□□□□□ -1.86
SSBP3Q9BWW4 MIR32-201ENST00000384965 70 ntBASIC3.46□□□□□ -1.86
SSBP3Q9BWW4 MIR153-2-201ENST00000385225 87 ntBASIC3.46□□□□□ -1.86
SSBP3Q9BWW4 SNORA46.1-201ENST00000391069 153 ntBASIC3.46□□□□□ -1.86
SSBP3Q9BWW4 RNU6-1135P-201ENST00000411083 103 ntBASIC3.46□□□□□ -1.86
SSBP3Q9BWW4 RAB9AP3-201ENST00000412737 573 ntBASIC3.46□□□□□ -1.86
SSBP3Q9BWW4 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC3.46□□□□□ -1.86
SSBP3Q9BWW4 AL078601.1-201ENST00000444542 271 ntBASIC3.46□□□□□ -1.86
SSBP3Q9BWW4 AL031659.1-201ENST00000447075 539 ntBASIC3.46□□□□□ -1.86
SSBP3Q9BWW4 RAB9AP1-201ENST00000449393 573 ntBASIC3.46□□□□□ -1.86
SSBP3Q9BWW4 AC092798.1-201ENST00000458542 409 ntBASIC3.46□□□□□ -1.86
SSBP3Q9BWW4 AP001025.1-201ENST00000486139 332 ntBASIC3.46□□□□□ -1.86
SSBP3Q9BWW4 AC108145.1-201ENST00000503770 153 ntBASIC3.46□□□□□ -1.86
SSBP3Q9BWW4 AC010265.1-201ENST00000513509 211 ntBASIC3.46□□□□□ -1.86
SSBP3Q9BWW4 RNU6-313P-201ENST00000516317 112 ntBASIC3.46□□□□□ -1.86
SSBP3Q9BWW4 RNU6-572P-201ENST00000516724 80 ntBASIC3.46□□□□□ -1.86
SSBP3Q9BWW4 AP005660.1-201ENST00000522972 293 ntBASIC3.46□□□□□ -1.86
SSBP3Q9BWW4 AC069240.1-201ENST00000548774 375 ntBASIC3.46□□□□□ -1.86
SSBP3Q9BWW4 RPL23AP88-201ENST00000605759 454 ntBASIC3.46□□□□□ -1.86
SSBP3Q9BWW4 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC3.46□□□□□ -1.86
SSBP3Q9BWW4 AC073349.3-201ENST00000617616 186 ntBASIC3.46□□□□□ -1.86
SSBP3Q9BWW4 AC027309.3-201ENST00000623419 351 ntBASIC3.46□□□□□ -1.86
SSBP3Q9BWW4 MTND1P7-201ENST00000632801 297 ntBASIC3.46□□□□□ -1.86
SSBP3Q9BWW4 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.46□□□□□ -1.86
SSBP3Q9BWW4 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
SSBP3Q9BWW4 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
SSBP3Q9BWW4 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
SSBP3Q9BWW4 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.46□□□□□ -1.86
SSBP3Q9BWW4 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.45□□□□□ -1.86
SSBP3Q9BWW4 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
SSBP3Q9BWW4 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.45□□□□□ -1.86
SSBP3Q9BWW4 MIR410-201ENST00000362222 80 ntBASIC3.45□□□□□ -1.86
SSBP3Q9BWW4 SNORD115-32-201ENST00000364079 82 ntBASIC3.45□□□□□ -1.86
SSBP3Q9BWW4 RNA5SP130-201ENST00000364431 114 ntBASIC3.45□□□□□ -1.86
SSBP3Q9BWW4 Y_RNA.308-201ENST00000365043 101 ntBASIC3.45□□□□□ -1.86
SSBP3Q9BWW4 Y_RNA.343-201ENST00000365354 112 ntBASIC3.45□□□□□ -1.86
SSBP3Q9BWW4 Y_RNA.418-201ENST00000384029 102 ntBASIC3.45□□□□□ -1.86
SSBP3Q9BWW4 Y_RNA.435-201ENST00000384095 112 ntBASIC3.45□□□□□ -1.86
SSBP3Q9BWW4 RNU6-541P-201ENST00000384709 110 ntBASIC3.45□□□□□ -1.86
SSBP3Q9BWW4 MIR3074-201ENST00000384885 81 ntBASIC3.45□□□□□ -1.86
SSBP3Q9BWW4 RNU1-139P-201ENST00000391307 165 ntBASIC3.45□□□□□ -1.86
SSBP3Q9BWW4 EIF4EBP2P3-201ENST00000403144 334 ntBASIC3.45□□□□□ -1.86
SSBP3Q9BWW4 U3.39-201ENST00000408569 239 ntBASIC3.45□□□□□ -1.86
SSBP3Q9BWW4 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.45□□□□□ -1.86
SSBP3Q9BWW4 AL356095.1-201ENST00000417217 199 ntBASIC3.45□□□□□ -1.86
SSBP3Q9BWW4 AC079780.1-201ENST00000428259 207 ntBASIC3.45□□□□□ -1.86
SSBP3Q9BWW4 AL356867.1-201ENST00000429623 299 ntBASIC3.45□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 149.6 ms