Protein–RNA interactions for Protein: Q9BWF2

TRAIP, E3 ubiquitin-protein ligase TRAIP, humanhuman

Predictions only

Length 469 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIPQ9BWF2 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
TRAIPQ9BWF2 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
TRAIPQ9BWF2 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
TRAIPQ9BWF2 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC4.56□□□□□ -1.68
TRAIPQ9BWF2 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
TRAIPQ9BWF2 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
TRAIPQ9BWF2 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
TRAIPQ9BWF2 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
TRAIPQ9BWF2 RNU6-541P-201ENST00000384709 110 ntBASIC4.56□□□□□ -1.68
TRAIPQ9BWF2 MIR134-201ENST00000385258 73 ntBASIC4.56□□□□□ -1.68
TRAIPQ9BWF2 U3.26-201ENST00000391236 204 ntBASIC4.56□□□□□ -1.68
TRAIPQ9BWF2 MIR190B-201ENST00000401119 79 ntBASIC4.56□□□□□ -1.68
TRAIPQ9BWF2 RN7SKP27-201ENST00000410684 333 ntBASIC4.56□□□□□ -1.68
TRAIPQ9BWF2 AL358453.1-201ENST00000422522 250 ntBASIC4.56□□□□□ -1.68
TRAIPQ9BWF2 MTND2P23-201ENST00000422990 651 ntBASIC4.56□□□□□ -1.68
TRAIPQ9BWF2 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC4.56□□□□□ -1.68
TRAIPQ9BWF2 Z98742.2-201ENST00000431564 187 ntBASIC4.56□□□□□ -1.68
TRAIPQ9BWF2 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC4.56□□□□□ -1.68
TRAIPQ9BWF2 RPL23AP46-201ENST00000438548 490 ntBASIC4.56□□□□□ -1.68
TRAIPQ9BWF2 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC4.56□□□□□ -1.68
TRAIPQ9BWF2 ABCF2P2-201ENST00000450549 296 ntBASIC4.56□□□□□ -1.68
TRAIPQ9BWF2 AC087477.1-201ENST00000465747 340 ntBASIC4.56□□□□□ -1.68
TRAIPQ9BWF2 AC025445.1-201ENST00000502728 300 ntBASIC4.56□□□□□ -1.68
TRAIPQ9BWF2 AIG1P1-201ENST00000503376 148 ntBASIC4.56□□□□□ -1.68
TRAIPQ9BWF2 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC4.56□□□□□ -1.68
TRAIPQ9BWF2 MRPS36P2-201ENST00000512569 299 ntBASIC4.56□□□□□ -1.68
TRAIPQ9BWF2 Y_RNA.721-201ENST00000517207 102 ntBASIC4.56□□□□□ -1.68
TRAIPQ9BWF2 AC006557.5-201ENST00000603126 811 ntBASIC4.56□□□□□ -1.68
TRAIPQ9BWF2 RPL23AP88-201ENST00000605759 454 ntBASIC4.56□□□□□ -1.68
TRAIPQ9BWF2 RMST_6.1-201ENST00000611980 203 ntBASIC4.56□□□□□ -1.68
TRAIPQ9BWF2 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.56□□□□□ -1.68
TRAIPQ9BWF2 AC034229.5-201ENST00000624258 185 ntBASIC4.56□□□□□ -1.68
TRAIPQ9BWF2 AC110774.1-201ENST00000623567 2018 ntBASIC4.56□□□□□ -1.68
TRAIPQ9BWF2 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC4.56□□□□□ -1.68
TRAIPQ9BWF2 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
TRAIPQ9BWF2 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
TRAIPQ9BWF2 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.56□□□□□ -1.68
TRAIPQ9BWF2 AC099654.7-201ENST00000635788 2127 ntBASIC4.55□□□□□ -1.68
TRAIPQ9BWF2 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
TRAIPQ9BWF2 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.55□□□□□ -1.68
TRAIPQ9BWF2 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.55□□□□□ -1.68
TRAIPQ9BWF2 RLIMP1-201ENST00000339626 1680 ntBASIC4.55□□□□□ -1.68
TRAIPQ9BWF2 IL33-202ENST00000417746 2327 ntTSL 2 BASIC4.55□□□□□ -1.68
TRAIPQ9BWF2 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.55□□□□□ -1.68
TRAIPQ9BWF2 Y_RNA.80-201ENST00000362996 102 ntBASIC4.55□□□□□ -1.68
TRAIPQ9BWF2 RHOT1P2-201ENST00000366423 333 ntBASIC4.55□□□□□ -1.68
TRAIPQ9BWF2 MIR32-201ENST00000384965 70 ntBASIC4.55□□□□□ -1.68
TRAIPQ9BWF2 MIR93-201ENST00000385024 80 ntBASIC4.55□□□□□ -1.68
TRAIPQ9BWF2 MIR153-2-201ENST00000385225 87 ntBASIC4.55□□□□□ -1.68
TRAIPQ9BWF2 SAR1AP2-201ENST00000392696 594 ntBASIC4.55□□□□□ -1.68
TRAIPQ9BWF2 RNU6-628P-201ENST00000410675 107 ntBASIC4.55□□□□□ -1.68
TRAIPQ9BWF2 CYCSP48-201ENST00000417124 323 ntBASIC4.55□□□□□ -1.68
TRAIPQ9BWF2 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC4.55□□□□□ -1.68
TRAIPQ9BWF2 RPL30P1-201ENST00000488676 339 ntBASIC4.55□□□□□ -1.68
TRAIPQ9BWF2 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC4.55□□□□□ -1.68
TRAIPQ9BWF2 MTND4LP22-201ENST00000508209 276 ntBASIC4.55□□□□□ -1.68
TRAIPQ9BWF2 RNA5SP112-201ENST00000515937 99 ntBASIC4.55□□□□□ -1.68
TRAIPQ9BWF2 RNU6-475P-201ENST00000516073 104 ntBASIC4.55□□□□□ -1.68
TRAIPQ9BWF2 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC4.55□□□□□ -1.68
TRAIPQ9BWF2 MIR4286-201ENST00000580651 93 ntBASIC4.55□□□□□ -1.68
TRAIPQ9BWF2 AC091903.1-201ENST00000624322 454 ntBASIC4.55□□□□□ -1.68
TRAIPQ9BWF2 DLD-214ENST00000639772 421 ntTSL 5 BASIC4.55□□□□□ -1.68
TRAIPQ9BWF2 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
TRAIPQ9BWF2 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
TRAIPQ9BWF2 LINC02471-203ENST00000641941 4752 ntBASIC4.54□□□□□ -1.68
TRAIPQ9BWF2 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
TRAIPQ9BWF2 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
TRAIPQ9BWF2 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
TRAIPQ9BWF2 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
TRAIPQ9BWF2 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
TRAIPQ9BWF2 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
TRAIPQ9BWF2 OR56A5-201ENST00000340110 738 ntBASIC4.54□□□□□ -1.68
TRAIPQ9BWF2 RNU6-1285P-201ENST00000363480 105 ntBASIC4.54□□□□□ -1.68
TRAIPQ9BWF2 Y_RNA.145-201ENST00000363527 102 ntBASIC4.54□□□□□ -1.68
TRAIPQ9BWF2 RNA5SP104-201ENST00000410989 118 ntBASIC4.54□□□□□ -1.68
TRAIPQ9BWF2 AC114482.1-201ENST00000418010 247 ntBASIC4.54□□□□□ -1.68
TRAIPQ9BWF2 AC097463.2-201ENST00000421074 142 ntBASIC4.54□□□□□ -1.68
TRAIPQ9BWF2 MTCO3P29-201ENST00000432119 779 ntBASIC4.54□□□□□ -1.68
TRAIPQ9BWF2 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC4.54□□□□□ -1.68
TRAIPQ9BWF2 RPL27AP5-201ENST00000469428 449 ntBASIC4.54□□□□□ -1.68
TRAIPQ9BWF2 TAF8-207ENST00000482432 556 ntTSL 2 BASIC4.54□□□□□ -1.68
TRAIPQ9BWF2 RNU6-1198P-201ENST00000516904 67 ntBASIC4.54□□□□□ -1.68
TRAIPQ9BWF2 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
TRAIPQ9BWF2 MIR5571-201ENST00000577998 113 ntBASIC4.54□□□□□ -1.68
TRAIPQ9BWF2 AC006130.2-201ENST00000586202 326 ntBASIC4.54□□□□□ -1.68
TRAIPQ9BWF2 AL138963.2-201ENST00000605137 226 ntBASIC4.54□□□□□ -1.68
TRAIPQ9BWF2 AC069200.1-201ENST00000609511 323 ntBASIC4.54□□□□□ -1.68
TRAIPQ9BWF2 AL132822.1-201ENST00000617063 513 ntBASIC4.54□□□□□ -1.68
TRAIPQ9BWF2 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
TRAIPQ9BWF2 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
TRAIPQ9BWF2 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC4.54□□□□□ -1.68
TRAIPQ9BWF2 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4.53□□□□□ -1.68
TRAIPQ9BWF2 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.53□□□□□ -1.68
TRAIPQ9BWF2 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
TRAIPQ9BWF2 SNORD115-32-201ENST00000364079 82 ntBASIC4.53□□□□□ -1.68
TRAIPQ9BWF2 RNU1-57P-201ENST00000384491 166 ntBASIC4.53□□□□□ -1.68
TRAIPQ9BWF2 RNU6-738P-201ENST00000384531 106 ntBASIC4.53□□□□□ -1.68
TRAIPQ9BWF2 Y_RNA.526-201ENST00000384572 110 ntBASIC4.53□□□□□ -1.68
TRAIPQ9BWF2 RPL21P65-201ENST00000406094 466 ntBASIC4.53□□□□□ -1.68
TRAIPQ9BWF2 RNU6-101P-201ENST00000410323 104 ntBASIC4.53□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 10.5 ms