Protein–RNA interactions for Protein: Q99958

FOXC2, Forkhead box protein C2, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC2Q99958 FAM92A1P2-202ENST00000504766 877 ntBASIC1.8□□□□□ -2.12
FOXC2Q99958 AC010587.1-201ENST00000505809 469 ntBASIC1.8□□□□□ -2.12
FOXC2Q99958 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC1.8□□□□□ -2.12
FOXC2Q99958 SNORA31.19-201ENST00000517079 126 ntBASIC1.8□□□□□ -2.12
FOXC2Q99958 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC1.8□□□□□ -2.12
FOXC2Q99958 AC078814.3-201ENST00000553036 491 ntBASIC1.8□□□□□ -2.12
FOXC2Q99958 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC1.8□□□□□ -2.12
FOXC2Q99958 AC008088.1-201ENST00000580993 280 ntBASIC1.8□□□□□ -2.12
FOXC2Q99958 AL670379.10-201ENST00000604330 253 ntBASIC1.8□□□□□ -2.12
FOXC2Q99958 AL670379.9-201ENST00000605428 253 ntBASIC1.8□□□□□ -2.12
FOXC2Q99958 AL589994.2-201ENST00000621124 579 ntBASIC1.8□□□□□ -2.12
FOXC2Q99958 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
FOXC2Q99958 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
FOXC2Q99958 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
FOXC2Q99958 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC1.8□□□□□ -2.12
FOXC2Q99958 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
FOXC2Q99958 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
FOXC2Q99958 RNU5E-1-201ENST00000362477 120 ntBASIC1.79□□□□□ -2.12
FOXC2Q99958 MIR518E-201ENST00000385252 88 ntBASIC1.79□□□□□ -2.12
FOXC2Q99958 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC1.79□□□□□ -2.12
FOXC2Q99958 FCF1P10-201ENST00000407590 479 ntBASIC1.79□□□□□ -2.12
FOXC2Q99958 U3.37-201ENST00000408528 213 ntBASIC1.79□□□□□ -2.12
FOXC2Q99958 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC1.79□□□□□ -2.12
FOXC2Q99958 AC127391.1-201ENST00000411737 98 ntBASIC1.79□□□□□ -2.12
FOXC2Q99958 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC1.79□□□□□ -2.12
FOXC2Q99958 EDDM3CP-201ENST00000415977 425 ntBASIC1.79□□□□□ -2.12
FOXC2Q99958 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC1.79□□□□□ -2.12
FOXC2Q99958 AL160275.3-201ENST00000423876 471 ntBASIC1.79□□□□□ -2.12
FOXC2Q99958 TRIM60P10Y-201ENST00000425589 751 ntBASIC1.79□□□□□ -2.12
FOXC2Q99958 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC1.79□□□□□ -2.12
FOXC2Q99958 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC1.79□□□□□ -2.12
FOXC2Q99958 AL591212.2-201ENST00000433923 257 ntBASIC1.79□□□□□ -2.12
FOXC2Q99958 NDUFA5P4-201ENST00000436704 385 ntBASIC1.79□□□□□ -2.12
FOXC2Q99958 AC009238.1-201ENST00000442165 424 ntBASIC1.79□□□□□ -2.12
FOXC2Q99958 AL022238.1-201ENST00000442557 355 ntBASIC1.79□□□□□ -2.12
FOXC2Q99958 AL078601.1-201ENST00000444542 271 ntBASIC1.79□□□□□ -2.12
FOXC2Q99958 AC009237.6-201ENST00000446969 424 ntBASIC1.79□□□□□ -2.12
FOXC2Q99958 AC003071.1-201ENST00000451219 789 ntBASIC1.79□□□□□ -2.12
FOXC2Q99958 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC1.79□□□□□ -2.12
FOXC2Q99958 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC1.79□□□□□ -2.12
FOXC2Q99958 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC1.79□□□□□ -2.12
FOXC2Q99958 SNRPFP4-201ENST00000456366 242 ntBASIC1.79□□□□□ -2.12
FOXC2Q99958 SNORD42A-201ENST00000459584 64 ntBASIC1.79□□□□□ -2.12
FOXC2Q99958 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC1.79□□□□□ -2.12
FOXC2Q99958 RPL7P43-201ENST00000478876 753 ntBASIC1.79□□□□□ -2.12
FOXC2Q99958 RPL36AP21-201ENST00000490372 323 ntBASIC1.79□□□□□ -2.12
FOXC2Q99958 AC109927.2-201ENST00000506416 303 ntBASIC1.79□□□□□ -2.12
FOXC2Q99958 AC010486.3-201ENST00000511602 785 ntBASIC1.79□□□□□ -2.12
FOXC2Q99958 RNU2-10P-201ENST00000516375 211 ntBASIC1.79□□□□□ -2.12
FOXC2Q99958 RNU6-914P-201ENST00000516749 109 ntBASIC1.79□□□□□ -2.12
FOXC2Q99958 RNU6-677P-201ENST00000516914 101 ntBASIC1.79□□□□□ -2.12
FOXC2Q99958 RNU6-1092P-201ENST00000516955 87 ntBASIC1.79□□□□□ -2.12
FOXC2Q99958 RNU2-19P-201ENST00000517288 84 ntBASIC1.79□□□□□ -2.12
FOXC2Q99958 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC1.79□□□□□ -2.12
FOXC2Q99958 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC1.79□□□□□ -2.12
FOXC2Q99958 IGHVIII-5-1-201ENST00000523059 99 ntBASIC1.79□□□□□ -2.12
FOXC2Q99958 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC1.79□□□□□ -2.12
FOXC2Q99958 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC1.79□□□□□ -2.12
FOXC2Q99958 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC1.79□□□□□ -2.12
FOXC2Q99958 MIR1273C-201ENST00000578669 77 ntBASIC1.79□□□□□ -2.12
FOXC2Q99958 AC110760.3-201ENST00000598794 467 ntBASIC1.79□□□□□ -2.12
FOXC2Q99958 Z99497.2-201ENST00000603634 310 ntBASIC1.79□□□□□ -2.12
FOXC2Q99958 AC022893.3-201ENST00000607665 437 ntBASIC1.79□□□□□ -2.12
FOXC2Q99958 AC006338.1-201ENST00000618453 749 ntBASIC1.79□□□□□ -2.12
FOXC2Q99958 AL162373.1-201ENST00000620433 407 ntBASIC1.79□□□□□ -2.12
FOXC2Q99958 AC078883.4-201ENST00000623218 367 ntBASIC1.79□□□□□ -2.12
FOXC2Q99958 AC091931.1-201ENST00000623488 728 ntBASIC1.79□□□□□ -2.12
FOXC2Q99958 MIR3974-201ENST00000637126 96 ntBASIC1.79□□□□□ -2.12
FOXC2Q99958 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.79□□□□□ -2.12
FOXC2Q99958 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
FOXC2Q99958 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
FOXC2Q99958 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC1.78□□□□□ -2.12
FOXC2Q99958 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC1.78□□□□□ -2.12
FOXC2Q99958 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC1.78□□□□□ -2.12
FOXC2Q99958 ANKRD36BP1-202ENST00000604892 1417 ntBASIC1.78□□□□□ -2.12
FOXC2Q99958 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
FOXC2Q99958 FGF7P2-201ENST00000332473 296 ntBASIC1.78□□□□□ -2.12
FOXC2Q99958 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
FOXC2Q99958 HSPE1P11-201ENST00000339579 310 ntBASIC1.78□□□□□ -2.12
FOXC2Q99958 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
FOXC2Q99958 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC1.78□□□□□ -2.12
FOXC2Q99958 U3.4-201ENST00000363352 213 ntBASIC1.78□□□□□ -2.12
FOXC2Q99958 RPL23AP32-201ENST00000395315 459 ntBASIC1.78□□□□□ -2.12
FOXC2Q99958 CIR1P3-201ENST00000405137 479 ntBASIC1.78□□□□□ -2.12
FOXC2Q99958 RNU6ATAC16P-201ENST00000408591 138 ntBASIC1.78□□□□□ -2.12
FOXC2Q99958 RPS3AP3-201ENST00000411933 242 ntBASIC1.78□□□□□ -2.12
FOXC2Q99958 AL356379.1-201ENST00000414105 126 ntBASIC1.78□□□□□ -2.12
FOXC2Q99958 AC090960.1-201ENST00000421072 306 ntBASIC1.78□□□□□ -2.12
FOXC2Q99958 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC1.78□□□□□ -2.12
FOXC2Q99958 AC006366.1-201ENST00000422002 759 ntBASIC1.78□□□□□ -2.12
FOXC2Q99958 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC1.78□□□□□ -2.12
FOXC2Q99958 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC1.78□□□□□ -2.12
FOXC2Q99958 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.78□□□□□ -2.12
FOXC2Q99958 MTND2P4-201ENST00000445034 1004 ntBASIC1.78□□□□□ -2.12
FOXC2Q99958 PSPHP1-201ENST00000450062 261 ntBASIC1.78□□□□□ -2.12
FOXC2Q99958 FABP5P13-201ENST00000452144 328 ntBASIC1.78□□□□□ -2.12
FOXC2Q99958 SSXP1-201ENST00000453640 473 ntBASIC1.78□□□□□ -2.12
FOXC2Q99958 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC1.78□□□□□ -2.12
FOXC2Q99958 AC140059.1-201ENST00000489238 361 ntBASIC1.78□□□□□ -2.12
FOXC2Q99958 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC1.78□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 133.6 ms