Protein–RNA interactions for Protein: Q96MX0

CMTM3, CKLF-like MARVEL transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3Q96MX0 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
CMTM3Q96MX0 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC2.66□□□□□ -1.98
CMTM3Q96MX0 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
CMTM3Q96MX0 RNU4-35P-201ENST00000362588 141 ntBASIC2.66□□□□□ -1.98
CMTM3Q96MX0 RNA5SP124-201ENST00000362739 110 ntBASIC2.66□□□□□ -1.98
CMTM3Q96MX0 Y_RNA.256-201ENST00000364594 104 ntBASIC2.66□□□□□ -1.98
CMTM3Q96MX0 RNU6-877P-201ENST00000383868 107 ntBASIC2.66□□□□□ -1.98
CMTM3Q96MX0 RNU1-138P-201ENST00000384093 164 ntBASIC2.66□□□□□ -1.98
CMTM3Q96MX0 SNORA5A-201ENST00000384111 134 ntBASIC2.66□□□□□ -1.98
CMTM3Q96MX0 MIR181B1-201ENST00000385240 110 ntBASIC2.66□□□□□ -1.98
CMTM3Q96MX0 EIF4E2P1-201ENST00000393781 255 ntBASIC2.66□□□□□ -1.98
CMTM3Q96MX0 AL590004.2-201ENST00000404787 371 ntBASIC2.66□□□□□ -1.98
CMTM3Q96MX0 RNU4-26P-201ENST00000410270 107 ntBASIC2.66□□□□□ -1.98
CMTM3Q96MX0 RNU6-1140P-201ENST00000410517 106 ntBASIC2.66□□□□□ -1.98
CMTM3Q96MX0 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC2.66□□□□□ -1.98
CMTM3Q96MX0 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC2.66□□□□□ -1.98
CMTM3Q96MX0 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.66□□□□□ -1.98
CMTM3Q96MX0 AL117339.3-201ENST00000418733 162 ntBASIC2.66□□□□□ -1.98
CMTM3Q96MX0 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC2.66□□□□□ -1.98
CMTM3Q96MX0 RPS3AP44-201ENST00000425466 790 ntBASIC2.66□□□□□ -1.98
CMTM3Q96MX0 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC2.66□□□□□ -1.98
CMTM3Q96MX0 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC2.66□□□□□ -1.98
CMTM3Q96MX0 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC2.66□□□□□ -1.98
CMTM3Q96MX0 RPS29P6-201ENST00000438196 145 ntBASIC2.66□□□□□ -1.98
CMTM3Q96MX0 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC2.66□□□□□ -1.98
CMTM3Q96MX0 AC104389.3-201ENST00000445629 235 ntBASIC2.66□□□□□ -1.98
CMTM3Q96MX0 AL031274.1-201ENST00000450334 232 ntBASIC2.66□□□□□ -1.98
CMTM3Q96MX0 AC091153.1-201ENST00000466297 402 ntBASIC2.66□□□□□ -1.98
CMTM3Q96MX0 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC2.66□□□□□ -1.98
CMTM3Q96MX0 AC097462.2-201ENST00000504623 481 ntBASIC2.66□□□□□ -1.98
CMTM3Q96MX0 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.66□□□□□ -1.98
CMTM3Q96MX0 AC087854.1-201ENST00000519706 414 ntBASIC2.66□□□□□ -1.98
CMTM3Q96MX0 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC2.66□□□□□ -1.98
CMTM3Q96MX0 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC2.66□□□□□ -1.98
CMTM3Q96MX0 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC2.66□□□□□ -1.98
CMTM3Q96MX0 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC2.66□□□□□ -1.98
CMTM3Q96MX0 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC2.66□□□□□ -1.98
CMTM3Q96MX0 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC2.66□□□□□ -1.98
CMTM3Q96MX0 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC2.66□□□□□ -1.98
CMTM3Q96MX0 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC2.66□□□□□ -1.98
CMTM3Q96MX0 AC023043.3-201ENST00000593113 385 ntBASIC2.66□□□□□ -1.98
CMTM3Q96MX0 AL449363.1-201ENST00000617815 186 ntBASIC2.66□□□□□ -1.98
CMTM3Q96MX0 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC2.66□□□□□ -1.98
CMTM3Q96MX0 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.65□□□□□ -1.98
CMTM3Q96MX0 Y_RNA.126-201ENST00000363382 111 ntBASIC2.65□□□□□ -1.99
CMTM3Q96MX0 RNU6-534P-201ENST00000364877 106 ntBASIC2.65□□□□□ -1.99
CMTM3Q96MX0 RNU1-57P-201ENST00000384491 166 ntBASIC2.65□□□□□ -1.99
CMTM3Q96MX0 RPS29P13-201ENST00000402041 169 ntBASIC2.65□□□□□ -1.99
CMTM3Q96MX0 Y_RNA.599-201ENST00000410489 109 ntBASIC2.65□□□□□ -1.99
CMTM3Q96MX0 RNU2-23P-201ENST00000410545 195 ntBASIC2.65□□□□□ -1.99
CMTM3Q96MX0 RNU6-1245P-201ENST00000411130 106 ntBASIC2.65□□□□□ -1.99
CMTM3Q96MX0 RNU6-373P-201ENST00000411247 98 ntBASIC2.65□□□□□ -1.99
CMTM3Q96MX0 RPS29P4-201ENST00000414733 161 ntBASIC2.65□□□□□ -1.99
CMTM3Q96MX0 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.65□□□□□ -1.99
CMTM3Q96MX0 EIF4EP4-201ENST00000424916 578 ntBASIC2.65□□□□□ -1.99
CMTM3Q96MX0 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
CMTM3Q96MX0 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
CMTM3Q96MX0 AC025518.1-201ENST00000479856 347 ntBASIC2.65□□□□□ -1.99
CMTM3Q96MX0 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.65□□□□□ -1.99
CMTM3Q96MX0 SNORA19.2-201ENST00000516013 114 ntBASIC2.65□□□□□ -1.99
CMTM3Q96MX0 RNU6-718P-201ENST00000516166 105 ntBASIC2.65□□□□□ -1.99
CMTM3Q96MX0 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC2.65□□□□□ -1.99
CMTM3Q96MX0 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.65□□□□□ -1.99
CMTM3Q96MX0 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC2.65□□□□□ -1.99
CMTM3Q96MX0 AC027176.1-201ENST00000560204 514 ntBASIC2.65□□□□□ -1.99
CMTM3Q96MX0 AC023824.2-201ENST00000566185 400 ntBASIC2.65□□□□□ -1.99
CMTM3Q96MX0 MIR5571-201ENST00000577998 113 ntBASIC2.65□□□□□ -1.99
CMTM3Q96MX0 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.65□□□□□ -1.99
CMTM3Q96MX0 MIR4276-201ENST00000584832 70 ntBASIC2.65□□□□□ -1.99
CMTM3Q96MX0 MIR5692C1-201ENST00000585309 91 ntBASIC2.65□□□□□ -1.99
CMTM3Q96MX0 AC073410.2-201ENST00000603240 332 ntBASIC2.65□□□□□ -1.99
CMTM3Q96MX0 AL121757.2-201ENST00000611223 313 ntBASIC2.65□□□□□ -1.99
CMTM3Q96MX0 RMST_3.1-201ENST00000611651 109 ntBASIC2.65□□□□□ -1.99
CMTM3Q96MX0 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC2.65□□□□□ -1.99
CMTM3Q96MX0 AL121772.2-201ENST00000614331 297 ntBASIC2.65□□□□□ -1.99
CMTM3Q96MX0 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.65□□□□□ -1.99
CMTM3Q96MX0 uc_338.15-201ENST00000615470 191 ntBASIC2.65□□□□□ -1.99
CMTM3Q96MX0 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
CMTM3Q96MX0 AC007792.1-201ENST00000623023 402 ntBASIC2.65□□□□□ -1.99
CMTM3Q96MX0 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
CMTM3Q96MX0 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
CMTM3Q96MX0 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC2.64□□□□□ -1.99
CMTM3Q96MX0 RNU6-428P-201ENST00000362942 107 ntBASIC2.64□□□□□ -1.99
CMTM3Q96MX0 RNU6-529P-201ENST00000363383 104 ntBASIC2.64□□□□□ -1.99
CMTM3Q96MX0 RNA5SP393-201ENST00000363423 117 ntBASIC2.64□□□□□ -1.99
CMTM3Q96MX0 RNA5SP50-201ENST00000363731 107 ntBASIC2.64□□□□□ -1.99
CMTM3Q96MX0 RNU6-336P-201ENST00000364891 107 ntBASIC2.64□□□□□ -1.99
CMTM3Q96MX0 Y_RNA.295-201ENST00000364918 102 ntBASIC2.64□□□□□ -1.99
CMTM3Q96MX0 RNU6-827P-201ENST00000365553 106 ntBASIC2.64□□□□□ -1.99
CMTM3Q96MX0 RNU6-332P-201ENST00000391193 108 ntBASIC2.64□□□□□ -1.99
CMTM3Q96MX0 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
CMTM3Q96MX0 RNU6ATAC34P-201ENST00000408879 121 ntBASIC2.64□□□□□ -1.99
CMTM3Q96MX0 Y_RNA.615-201ENST00000410769 117 ntBASIC2.64□□□□□ -1.99
CMTM3Q96MX0 Y_RNA.619-201ENST00000410951 90 ntBASIC2.64□□□□□ -1.99
CMTM3Q96MX0 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC2.64□□□□□ -1.99
CMTM3Q96MX0 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
CMTM3Q96MX0 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC2.64□□□□□ -1.99
CMTM3Q96MX0 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.64□□□□□ -1.99
CMTM3Q96MX0 AC124916.1-201ENST00000444020 547 ntBASIC2.64□□□□□ -1.99
CMTM3Q96MX0 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC2.64□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms