Protein–RNA interactions for Protein: Q96M95

CCDC42, Coiled-coil domain-containing protein 42, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42Q96M95 RNU6-23P-201ENST00000363283 107 ntBASIC1.07□□□□□ -2.24
CCDC42Q96M95 RNU6-853P-201ENST00000364306 107 ntBASIC1.07□□□□□ -2.24
CCDC42Q96M95 SNORA25.8-201ENST00000364831 128 ntBASIC1.07□□□□□ -2.24
CCDC42Q96M95 RNU6-166P-201ENST00000384371 107 ntBASIC1.07□□□□□ -2.24
CCDC42Q96M95 RNU6-817P-201ENST00000391083 104 ntBASIC1.07□□□□□ -2.24
CCDC42Q96M95 AC119751.3-201ENST00000399720 670 ntBASIC1.07□□□□□ -2.24
CCDC42Q96M95 CBX3P9-201ENST00000402326 552 ntBASIC1.07□□□□□ -2.24
CCDC42Q96M95 MIR1267-201ENST00000408723 78 ntBASIC1.07□□□□□ -2.24
CCDC42Q96M95 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC1.07□□□□□ -2.24
CCDC42Q96M95 RPL37P10-201ENST00000412884 288 ntBASIC1.07□□□□□ -2.24
CCDC42Q96M95 RPL21P90-201ENST00000415692 466 ntBASIC1.07□□□□□ -2.24
CCDC42Q96M95 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC1.07□□□□□ -2.24
CCDC42Q96M95 SNRPEP10-201ENST00000420249 274 ntBASIC1.07□□□□□ -2.24
CCDC42Q96M95 RAC1P6-201ENST00000423911 575 ntBASIC1.07□□□□□ -2.24
CCDC42Q96M95 RPS27P16-201ENST00000425758 201 ntBASIC1.07□□□□□ -2.24
CCDC42Q96M95 UBE2D3P3-201ENST00000426992 425 ntBASIC1.07□□□□□ -2.24
CCDC42Q96M95 RPL23AP35-201ENST00000451906 501 ntBASIC1.07□□□□□ -2.24
CCDC42Q96M95 AC087343.1-201ENST00000477341 475 ntBASIC1.07□□□□□ -2.24
CCDC42Q96M95 AC108210.2-201ENST00000503681 201 ntBASIC1.07□□□□□ -2.24
CCDC42Q96M95 RNU6-965P-201ENST00000516721 96 ntBASIC1.07□□□□□ -2.24
CCDC42Q96M95 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC1.07□□□□□ -2.24
CCDC42Q96M95 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC1.07□□□□□ -2.24
CCDC42Q96M95 AC012414.6-201ENST00000568241 401 ntBASIC1.07□□□□□ -2.24
CCDC42Q96M95 MIR3169-201ENST00000578032 83 ntBASIC1.07□□□□□ -2.24
CCDC42Q96M95 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC1.07□□□□□ -2.24
CCDC42Q96M95 BNIP3P30-201ENST00000601184 574 ntBASIC1.07□□□□□ -2.24
CCDC42Q96M95 RPL21P136-201ENST00000605378 396 ntBASIC1.07□□□□□ -2.24
CCDC42Q96M95 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC1.07□□□□□ -2.24
CCDC42Q96M95 AC092656.1-203ENST00000624134 423 ntBASIC1.07□□□□□ -2.24
CCDC42Q96M95 AC008993.2-201ENST00000631744 806 ntBASIC1.07□□□□□ -2.24
CCDC42Q96M95 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
CCDC42Q96M95 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.06□□□□□ -2.24
CCDC42Q96M95 MTND5P33-201ENST00000571250 1450 ntBASIC1.06□□□□□ -2.24
CCDC42Q96M95 RNU6-414P-201ENST00000363705 104 ntBASIC1.06□□□□□ -2.24
CCDC42Q96M95 RNU6-1210P-201ENST00000363775 107 ntBASIC1.06□□□□□ -2.24
CCDC42Q96M95 SNORD1A-201ENST00000364968 72 ntBASIC1.06□□□□□ -2.24
CCDC42Q96M95 MIR29B2-201ENST00000385055 81 ntBASIC1.06□□□□□ -2.24
CCDC42Q96M95 MIR301A-201ENST00000385261 86 ntBASIC1.06□□□□□ -2.24
CCDC42Q96M95 AL953862.1-201ENST00000423016 168 ntBASIC1.06□□□□□ -2.24
CCDC42Q96M95 AC139712.2-201ENST00000424302 339 ntBASIC1.06□□□□□ -2.24
CCDC42Q96M95 AC108667.1-201ENST00000428618 249 ntBASIC1.06□□□□□ -2.24
CCDC42Q96M95 AL135790.2-201ENST00000437701 267 ntBASIC1.06□□□□□ -2.24
CCDC42Q96M95 RPL39P29-201ENST00000447779 157 ntBASIC1.06□□□□□ -2.24
CCDC42Q96M95 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.06□□□□□ -2.24
CCDC42Q96M95 RPL30P1-201ENST00000488676 339 ntBASIC1.06□□□□□ -2.24
CCDC42Q96M95 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC1.06□□□□□ -2.24
CCDC42Q96M95 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.06□□□□□ -2.24
CCDC42Q96M95 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC1.06□□□□□ -2.24
CCDC42Q96M95 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC1.06□□□□□ -2.24
CCDC42Q96M95 AL512347.1-201ENST00000566420 503 ntBASIC1.06□□□□□ -2.24
CCDC42Q96M95 AL358072.1-201ENST00000604156 575 ntBASIC1.06□□□□□ -2.24
CCDC42Q96M95 MIR6078-201ENST00000611069 100 ntBASIC1.06□□□□□ -2.24
CCDC42Q96M95 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
CCDC42Q96M95 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
CCDC42Q96M95 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
CCDC42Q96M95 RNA5SP493-201ENST00000364115 91 ntBASIC1.05□□□□□ -2.24
CCDC42Q96M95 RNU6-743P-201ENST00000364151 106 ntBASIC1.05□□□□□ -2.24
CCDC42Q96M95 RNU4-38P-201ENST00000364472 129 ntBASIC1.05□□□□□ -2.24
CCDC42Q96M95 snoZ40.1-201ENST00000364540 72 ntBASIC1.05□□□□□ -2.24
CCDC42Q96M95 RNU6-160P-201ENST00000384591 107 ntBASIC1.05□□□□□ -2.24
CCDC42Q96M95 AL603865.2-201ENST00000401679 213 ntBASIC1.05□□□□□ -2.24
CCDC42Q96M95 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC1.05□□□□□ -2.24
CCDC42Q96M95 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC1.05□□□□□ -2.24
CCDC42Q96M95 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.05□□□□□ -2.24
CCDC42Q96M95 MTCO2P1-201ENST00000424648 477 ntBASIC1.05□□□□□ -2.24
CCDC42Q96M95 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC1.05□□□□□ -2.24
CCDC42Q96M95 AL022238.1-201ENST00000442557 355 ntBASIC1.05□□□□□ -2.24
CCDC42Q96M95 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC1.05□□□□□ -2.24
CCDC42Q96M95 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.05□□□□□ -2.24
CCDC42Q96M95 RPL30P6-201ENST00000475925 342 ntBASIC1.05□□□□□ -2.24
CCDC42Q96M95 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC1.05□□□□□ -2.24
CCDC42Q96M95 RAB11AP2-201ENST00000545905 639 ntBASIC1.05□□□□□ -2.24
CCDC42Q96M95 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
CCDC42Q96M95 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC1.05□□□□□ -2.24
CCDC42Q96M95 AL353997.5-201ENST00000618886 171 ntBASIC1.05□□□□□ -2.24
CCDC42Q96M95 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.05□□□□□ -2.24
CCDC42Q96M95 RNU6-622P-201ENST00000384272 103 ntBASIC1.04□□□□□ -2.24
CCDC42Q96M95 UBE2V1P10-201ENST00000414685 269 ntBASIC1.04□□□□□ -2.24
CCDC42Q96M95 AP1B1P2-201ENST00000416196 106 ntBASIC1.04□□□□□ -2.24
CCDC42Q96M95 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.04□□□□□ -2.24
CCDC42Q96M95 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC1.04□□□□□ -2.24
CCDC42Q96M95 ZNF736P7Y-201ENST00000425158 820 ntBASIC1.04□□□□□ -2.24
CCDC42Q96M95 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC1.04□□□□□ -2.24
CCDC42Q96M95 AC027119.1-201ENST00000440877 241 ntBASIC1.04□□□□□ -2.24
CCDC42Q96M95 MTND4P25-201ENST00000441039 533 ntBASIC1.04□□□□□ -2.24
CCDC42Q96M95 NEFMP1-201ENST00000443423 1006 ntBASIC1.04□□□□□ -2.24
CCDC42Q96M95 PAXBP1P1-201ENST00000449315 447 ntBASIC1.04□□□□□ -2.24
CCDC42Q96M95 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
CCDC42Q96M95 AC003071.1-201ENST00000451219 789 ntBASIC1.04□□□□□ -2.24
CCDC42Q96M95 AC012308.1-201ENST00000451232 178 ntBASIC1.04□□□□□ -2.24
CCDC42Q96M95 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC1.04□□□□□ -2.24
CCDC42Q96M95 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
CCDC42Q96M95 AL132657.2-201ENST00000564417 358 ntBASIC1.04□□□□□ -2.24
CCDC42Q96M95 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.04□□□□□ -2.24
CCDC42Q96M95 AL078604.3-201ENST00000615580 211 ntBASIC1.04□□□□□ -2.24
CCDC42Q96M95 AL512643.1-201ENST00000635735 524 ntBASIC1.04□□□□□ -2.24
CCDC42Q96M95 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.04□□□□□ -2.24
CCDC42Q96M95 AC006927.2-201ENST00000639256 389 ntBASIC1.04□□□□□ -2.24
CCDC42Q96M95 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.04□□□□□ -2.24
CCDC42Q96M95 AC233981.2-201ENST00000611524 1614 ntBASIC1.04□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms