Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC5.12□□□□□ -1.59
TRIM47Q96LD4 MAPK10-286ENST00000641208 8747 ntBASIC5.12□□□□□ -1.59
TRIM47Q96LD4 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC5.12□□□□□ -1.59
TRIM47Q96LD4 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC5.12□□□□□ -1.59
TRIM47Q96LD4 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
TRIM47Q96LD4 RNU6-525P-201ENST00000363685 104 ntBASIC5.12□□□□□ -1.59
TRIM47Q96LD4 RNU6-103P-201ENST00000363686 107 ntBASIC5.12□□□□□ -1.59
TRIM47Q96LD4 RNA5SP173-201ENST00000364857 136 ntBASIC5.12□□□□□ -1.59
TRIM47Q96LD4 Y_RNA.333-201ENST00000365274 102 ntBASIC5.12□□□□□ -1.59
TRIM47Q96LD4 AC006461.1-201ENST00000412637 326 ntBASIC5.12□□□□□ -1.59
TRIM47Q96LD4 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC5.12□□□□□ -1.59
TRIM47Q96LD4 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC5.12□□□□□ -1.59
TRIM47Q96LD4 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC5.12□□□□□ -1.59
TRIM47Q96LD4 AC008694.2-201ENST00000517591 306 ntBASIC5.12□□□□□ -1.59
TRIM47Q96LD4 HMGB1P14-201ENST00000557424 591 ntBASIC5.12□□□□□ -1.59
TRIM47Q96LD4 AC025521.1-201ENST00000621624 286 ntBASIC5.12□□□□□ -1.59
TRIM47Q96LD4 AC106754.2-201ENST00000623006 233 ntBASIC5.12□□□□□ -1.59
TRIM47Q96LD4 SCARNA4-201ENST00000629045 128 ntBASIC5.12□□□□□ -1.59
TRIM47Q96LD4 Clostridiales-1.2-201ENST00000636724 160 ntBASIC5.12□□□□□ -1.59
TRIM47Q96LD4 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
TRIM47Q96LD4 AC093535.2-201ENST00000624769 2326 ntBASIC5.12□□□□□ -1.59
TRIM47Q96LD4 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC5.12□□□□□ -1.59
TRIM47Q96LD4 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC5.11□□□□□ -1.59
TRIM47Q96LD4 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC5.11□□□□□ -1.59
TRIM47Q96LD4 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC5.11□□□□□ -1.59
TRIM47Q96LD4 ANKRD30BP1-201ENST00000451052 2186 ntBASIC5.11□□□□□ -1.59
TRIM47Q96LD4 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
TRIM47Q96LD4 SNORD46.1-201ENST00000364139 104 ntBASIC5.11□□□□□ -1.59
TRIM47Q96LD4 RNU6-384P-201ENST00000364900 104 ntBASIC5.11□□□□□ -1.59
TRIM47Q96LD4 RNU6-395P-201ENST00000365662 106 ntBASIC5.11□□□□□ -1.59
TRIM47Q96LD4 MIR200C-201ENST00000384980 68 ntBASIC5.11□□□□□ -1.59
TRIM47Q96LD4 MIR195-201ENST00000385194 87 ntBASIC5.11□□□□□ -1.59
TRIM47Q96LD4 BPY2DP-201ENST00000422208 265 ntBASIC5.11□□□□□ -1.59
TRIM47Q96LD4 RPL23AP52-201ENST00000439311 478 ntBASIC5.11□□□□□ -1.59
TRIM47Q96LD4 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC5.11□□□□□ -1.59
TRIM47Q96LD4 AC096638.1-201ENST00000444678 216 ntBASIC5.11□□□□□ -1.59
TRIM47Q96LD4 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC5.11□□□□□ -1.59
TRIM47Q96LD4 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC5.11□□□□□ -1.59
TRIM47Q96LD4 RNU6-347P-201ENST00000516658 105 ntBASIC5.11□□□□□ -1.59
TRIM47Q96LD4 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC5.11□□□□□ -1.59
TRIM47Q96LD4 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC5.11□□□□□ -1.59
TRIM47Q96LD4 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC5.11□□□□□ -1.59
TRIM47Q96LD4 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC5.11□□□□□ -1.59
TRIM47Q96LD4 AC022441.3-201ENST00000605737 136 ntBASIC5.11□□□□□ -1.59
TRIM47Q96LD4 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC5.11□□□□□ -1.59
TRIM47Q96LD4 AL161629.2-201ENST00000615347 275 ntBASIC5.11□□□□□ -1.59
TRIM47Q96LD4 MIR6875-201ENST00000617506 72 ntBASIC5.11□□□□□ -1.59
TRIM47Q96LD4 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC5.11□□□□□ -1.59
TRIM47Q96LD4 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
TRIM47Q96LD4 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
TRIM47Q96LD4 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
TRIM47Q96LD4 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
TRIM47Q96LD4 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC5.11□□□□□ -1.59
TRIM47Q96LD4 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
TRIM47Q96LD4 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC5.1□□□□□ -1.59
TRIM47Q96LD4 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC5.1□□□□□ -1.59
TRIM47Q96LD4 SRP72P2-201ENST00000344851 1979 ntBASIC5.1□□□□□ -1.59
TRIM47Q96LD4 RNU6-428P-201ENST00000362942 107 ntBASIC5.1□□□□□ -1.59
TRIM47Q96LD4 5S_rRNA.1-201ENST00000364415 116 ntBASIC5.1□□□□□ -1.59
TRIM47Q96LD4 Y_RNA.294-201ENST00000364916 102 ntBASIC5.1□□□□□ -1.59
TRIM47Q96LD4 RNU6-915P-201ENST00000364943 103 ntBASIC5.1□□□□□ -1.59
TRIM47Q96LD4 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC5.1□□□□□ -1.59
TRIM47Q96LD4 RNU6-905P-201ENST00000384434 107 ntBASIC5.1□□□□□ -1.59
TRIM47Q96LD4 AL591034.1-201ENST00000407447 340 ntBASIC5.1□□□□□ -1.59
TRIM47Q96LD4 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
TRIM47Q96LD4 RPL30P3-201ENST00000424262 333 ntBASIC5.1□□□□□ -1.59
TRIM47Q96LD4 RPL23AP83-201ENST00000434984 473 ntBASIC5.1□□□□□ -1.59
TRIM47Q96LD4 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC5.1□□□□□ -1.59
TRIM47Q96LD4 EIF4A1P11-201ENST00000451239 222 ntBASIC5.1□□□□□ -1.59
TRIM47Q96LD4 CPHL1P-201ENST00000461341 3407 ntBASIC5.1□□□□□ -1.59
TRIM47Q96LD4 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC5.1□□□□□ -1.59
TRIM47Q96LD4 IGLVIV-53-201ENST00000520107 367 ntBASIC5.1□□□□□ -1.59
TRIM47Q96LD4 AC109810.1-201ENST00000534066 224 ntBASIC5.1□□□□□ -1.59
TRIM47Q96LD4 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC5.1□□□□□ -1.59
TRIM47Q96LD4 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
TRIM47Q96LD4 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC5.1□□□□□ -1.59
TRIM47Q96LD4 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC5.1□□□□□ -1.59
TRIM47Q96LD4 AL391261.3-201ENST00000557194 520 ntBASIC5.1□□□□□ -1.59
TRIM47Q96LD4 AC090971.4-201ENST00000560291 1800 ntBASIC5.1□□□□□ -1.59
TRIM47Q96LD4 MIR3121-201ENST00000579680 77 ntBASIC5.1□□□□□ -1.59
TRIM47Q96LD4 AC091178.1-203ENST00000584586 279 ntBASIC5.1□□□□□ -1.59
TRIM47Q96LD4 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC5.1□□□□□ -1.59
TRIM47Q96LD4 RMST_6.1-201ENST00000611980 203 ntBASIC5.1□□□□□ -1.59
TRIM47Q96LD4 MIR6130-201ENST00000619419 109 ntBASIC5.1□□□□□ -1.59
TRIM47Q96LD4 AC090617.7-201ENST00000623952 126 ntBASIC5.1□□□□□ -1.59
TRIM47Q96LD4 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
TRIM47Q96LD4 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
TRIM47Q96LD4 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
TRIM47Q96LD4 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
TRIM47Q96LD4 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC5.09□□□□□ -1.59
TRIM47Q96LD4 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC5.09□□□□□ -1.59
TRIM47Q96LD4 LINC01109-201ENST00000603837 3081 ntBASIC5.09□□□□□ -1.59
TRIM47Q96LD4 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
TRIM47Q96LD4 MIR32-201ENST00000384965 70 ntBASIC5.09□□□□□ -1.59
TRIM47Q96LD4 RNU6ATAC-201ENST00000408749 126 ntBASIC5.09□□□□□ -1.59
TRIM47Q96LD4 RNU6-1001P-201ENST00000411265 100 ntBASIC5.09□□□□□ -1.59
TRIM47Q96LD4 RNU6-603P-201ENST00000411403 107 ntBASIC5.09□□□□□ -1.59
TRIM47Q96LD4 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC5.09□□□□□ -1.59
TRIM47Q96LD4 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC5.09□□□□□ -1.59
TRIM47Q96LD4 AL592045.1-201ENST00000429867 352 ntBASIC5.09□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms