Protein–RNA interactions for Protein: Q96JQ5

MS4A4A, Membrane-spanning 4-domains subfamily A member 4A, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A4AQ96JQ5 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.54□□□□□ -1.52
MS4A4AQ96JQ5 RNU1-6P-201ENST00000516290 144 ntBASIC5.54□□□□□ -1.52
MS4A4AQ96JQ5 Y_RNA.685-201ENST00000516532 108 ntBASIC5.54□□□□□ -1.52
MS4A4AQ96JQ5 RNU2-44P-201ENST00000516795 194 ntBASIC5.54□□□□□ -1.52
MS4A4AQ96JQ5 AC025647.1-201ENST00000517879 253 ntBASIC5.54□□□□□ -1.52
MS4A4AQ96JQ5 CYCSP29-201ENST00000533731 318 ntBASIC5.54□□□□□ -1.52
MS4A4AQ96JQ5 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC5.54□□□□□ -1.52
MS4A4AQ96JQ5 AC106785.1-201ENST00000565935 262 ntBASIC5.54□□□□□ -1.52
MS4A4AQ96JQ5 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC5.54□□□□□ -1.52
MS4A4AQ96JQ5 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
MS4A4AQ96JQ5 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
MS4A4AQ96JQ5 ABCC13-202ENST00000463099 3842 ntBASIC5.54□□□□□ -1.52
MS4A4AQ96JQ5 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
MS4A4AQ96JQ5 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC5.54□□□□□ -1.52
MS4A4AQ96JQ5 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.54□□□□□ -1.52
MS4A4AQ96JQ5 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
MS4A4AQ96JQ5 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC5.53□□□□□ -1.52
MS4A4AQ96JQ5 IL33-203ENST00000456383 2501 ntTSL 5 BASIC5.53□□□□□ -1.52
MS4A4AQ96JQ5 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC5.53□□□□□ -1.52
MS4A4AQ96JQ5 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
MS4A4AQ96JQ5 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
MS4A4AQ96JQ5 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
MS4A4AQ96JQ5 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
MS4A4AQ96JQ5 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
MS4A4AQ96JQ5 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
MS4A4AQ96JQ5 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC5.53□□□□□ -1.52
MS4A4AQ96JQ5 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
MS4A4AQ96JQ5 RNA5SP125-201ENST00000364843 120 ntBASIC5.53□□□□□ -1.52
MS4A4AQ96JQ5 Y_RNA.544-201ENST00000384650 113 ntBASIC5.53□□□□□ -1.52
MS4A4AQ96JQ5 MIR124-3-201ENST00000384866 87 ntBASIC5.53□□□□□ -1.52
MS4A4AQ96JQ5 MIR493-201ENST00000385254 89 ntBASIC5.53□□□□□ -1.52
MS4A4AQ96JQ5 SNORA26-201ENST00000391286 122 ntBASIC5.53□□□□□ -1.52
MS4A4AQ96JQ5 RNU2-70P-201ENST00000410718 179 ntBASIC5.53□□□□□ -1.52
MS4A4AQ96JQ5 AL358232.1-201ENST00000448030 501 ntBASIC5.53□□□□□ -1.52
MS4A4AQ96JQ5 AC007012.1-201ENST00000567192 175 ntBASIC5.53□□□□□ -1.52
MS4A4AQ96JQ5 AL022345.2-201ENST00000606307 135 ntBASIC5.53□□□□□ -1.52
MS4A4AQ96JQ5 AC114781.5-201ENST00000615297 108 ntBASIC5.53□□□□□ -1.52
MS4A4AQ96JQ5 AC007256.1-201ENST00000392253 2765 ntBASIC5.53□□□□□ -1.52
MS4A4AQ96JQ5 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.53□□□□□ -1.52
MS4A4AQ96JQ5 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
MS4A4AQ96JQ5 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
MS4A4AQ96JQ5 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
MS4A4AQ96JQ5 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
MS4A4AQ96JQ5 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
MS4A4AQ96JQ5 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
MS4A4AQ96JQ5 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
MS4A4AQ96JQ5 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
MS4A4AQ96JQ5 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
MS4A4AQ96JQ5 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
MS4A4AQ96JQ5 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
MS4A4AQ96JQ5 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC5.52□□□□□ -1.53
MS4A4AQ96JQ5 AL022323.4-201ENST00000623980 13120 ntBASIC5.52□□□□□ -1.53
MS4A4AQ96JQ5 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
MS4A4AQ96JQ5 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
MS4A4AQ96JQ5 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
MS4A4AQ96JQ5 SNORA73.1-201ENST00000363107 205 ntBASIC5.52□□□□□ -1.53
MS4A4AQ96JQ5 SNORA18.2-201ENST00000383865 132 ntBASIC5.52□□□□□ -1.53
MS4A4AQ96JQ5 MIR23B-201ENST00000384832 97 ntBASIC5.52□□□□□ -1.53
MS4A4AQ96JQ5 MIR23A-201ENST00000385245 73 ntBASIC5.52□□□□□ -1.53
MS4A4AQ96JQ5 SNORD12C-201ENST00000386307 89 ntBASIC5.52□□□□□ -1.53
MS4A4AQ96JQ5 RNA5SP241-201ENST00000391326 114 ntBASIC5.52□□□□□ -1.53
MS4A4AQ96JQ5 RPL23AP82-202ENST00000427528 469 ntBASIC5.52□□□□□ -1.53
MS4A4AQ96JQ5 RPL23AP7-203ENST00000449021 469 ntBASIC5.52□□□□□ -1.53
MS4A4AQ96JQ5 AC023449.1-201ENST00000454464 154 ntBASIC5.52□□□□□ -1.53
MS4A4AQ96JQ5 CENPBD1P1-201ENST00000464061 469 ntBASIC5.52□□□□□ -1.53
MS4A4AQ96JQ5 RN7SL558P-201ENST00000497468 299 ntBASIC5.52□□□□□ -1.53
MS4A4AQ96JQ5 AC005868.1-201ENST00000536421 331 ntBASIC5.52□□□□□ -1.53
MS4A4AQ96JQ5 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC5.52□□□□□ -1.53
MS4A4AQ96JQ5 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC5.52□□□□□ -1.53
MS4A4AQ96JQ5 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
MS4A4AQ96JQ5 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
MS4A4AQ96JQ5 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
MS4A4AQ96JQ5 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
MS4A4AQ96JQ5 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC5.52□□□□□ -1.53
MS4A4AQ96JQ5 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
MS4A4AQ96JQ5 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC5.52□□□□□ -1.53
MS4A4AQ96JQ5 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC5.52□□□□□ -1.53
MS4A4AQ96JQ5 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.52□□□□□ -1.53
MS4A4AQ96JQ5 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
MS4A4AQ96JQ5 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
MS4A4AQ96JQ5 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
MS4A4AQ96JQ5 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
MS4A4AQ96JQ5 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
MS4A4AQ96JQ5 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
MS4A4AQ96JQ5 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC5.51□□□□□ -1.53
MS4A4AQ96JQ5 AL138820.1-201ENST00000617901 5305 ntBASIC5.51□□□□□ -1.53
MS4A4AQ96JQ5 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.51□□□□□ -1.53
MS4A4AQ96JQ5 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
MS4A4AQ96JQ5 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
MS4A4AQ96JQ5 RNU6-271P-201ENST00000363858 105 ntBASIC5.51□□□□□ -1.53
MS4A4AQ96JQ5 RN7SKP280-201ENST00000364196 304 ntBASIC5.51□□□□□ -1.53
MS4A4AQ96JQ5 RNU6-49P-201ENST00000384256 107 ntBASIC5.51□□□□□ -1.53
MS4A4AQ96JQ5 SNORA72-201ENST00000384339 132 ntBASIC5.51□□□□□ -1.53
MS4A4AQ96JQ5 SNORA70C-201ENST00000384538 135 ntBASIC5.51□□□□□ -1.53
MS4A4AQ96JQ5 RNU1-82P-201ENST00000390851 165 ntBASIC5.51□□□□□ -1.53
MS4A4AQ96JQ5 RN7SKP17-201ENST00000411242 351 ntBASIC5.51□□□□□ -1.53
MS4A4AQ96JQ5 AL356387.2-201ENST00000422272 243 ntBASIC5.51□□□□□ -1.53
MS4A4AQ96JQ5 AC091167.1-201ENST00000492017 396 ntBASIC5.51□□□□□ -1.53
MS4A4AQ96JQ5 SNORA18.4-201ENST00000516440 124 ntBASIC5.51□□□□□ -1.53
MS4A4AQ96JQ5 AC107918.3-201ENST00000533272 382 ntBASIC5.51□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms