Protein–RNA interactions for Protein: Q96EP1

CHFR, E3 ubiquitin-protein ligase CHFR, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHFRQ96EP1 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
CHFRQ96EP1 RNU4-35P-201ENST00000362588 141 ntBASIC3.69□□□□□ -1.82
CHFRQ96EP1 Y_RNA.151-201ENST00000363566 112 ntBASIC3.69□□□□□ -1.82
CHFRQ96EP1 RNU6-715P-201ENST00000365204 103 ntBASIC3.69□□□□□ -1.82
CHFRQ96EP1 RNU6-339P-201ENST00000384310 107 ntBASIC3.69□□□□□ -1.82
CHFRQ96EP1 Z98941.1-201ENST00000407764 100 ntBASIC3.69□□□□□ -1.82
CHFRQ96EP1 RNU6-1203P-201ENST00000410703 110 ntBASIC3.69□□□□□ -1.82
CHFRQ96EP1 RNA5SP120-201ENST00000410900 112 ntBASIC3.69□□□□□ -1.82
CHFRQ96EP1 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.69□□□□□ -1.82
CHFRQ96EP1 EZH2P1-201ENST00000431167 291 ntBASIC3.69□□□□□ -1.82
CHFRQ96EP1 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.69□□□□□ -1.82
CHFRQ96EP1 AL031274.1-201ENST00000450334 232 ntBASIC3.69□□□□□ -1.82
CHFRQ96EP1 BTF3L4P4-201ENST00000506381 449 ntBASIC3.69□□□□□ -1.82
CHFRQ96EP1 SCARNA13-201ENST00000516672 275 ntBASIC3.69□□□□□ -1.82
CHFRQ96EP1 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC3.69□□□□□ -1.82
CHFRQ96EP1 RANP3-201ENST00000530970 276 ntBASIC3.69□□□□□ -1.82
CHFRQ96EP1 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.69□□□□□ -1.82
CHFRQ96EP1 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC3.69□□□□□ -1.82
CHFRQ96EP1 AL121603.1-201ENST00000553815 142 ntBASIC3.69□□□□□ -1.82
CHFRQ96EP1 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC3.69□□□□□ -1.82
CHFRQ96EP1 AC109446.1-201ENST00000566172 220 ntBASIC3.69□□□□□ -1.82
CHFRQ96EP1 AC008162.1-201ENST00000604718 254 ntBASIC3.69□□□□□ -1.82
CHFRQ96EP1 AL670379.4-201ENST00000605279 254 ntBASIC3.69□□□□□ -1.82
CHFRQ96EP1 AL034351.1-201ENST00000605288 668 ntBASIC3.69□□□□□ -1.82
CHFRQ96EP1 AL159153.1-201ENST00000619688 317 ntBASIC3.69□□□□□ -1.82
CHFRQ96EP1 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.69□□□□□ -1.82
CHFRQ96EP1 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CHFRQ96EP1 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.69□□□□□ -1.82
CHFRQ96EP1 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CHFRQ96EP1 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC3.69□□□□□ -1.82
CHFRQ96EP1 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.69□□□□□ -1.82
CHFRQ96EP1 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.69□□□□□ -1.82
CHFRQ96EP1 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
CHFRQ96EP1 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.69□□□□□ -1.82
CHFRQ96EP1 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
CHFRQ96EP1 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CHFRQ96EP1 AP001486.2-201ENST00000561652 5113 ntBASIC3.68□□□□□ -1.82
CHFRQ96EP1 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.68□□□□□ -1.82
CHFRQ96EP1 Y_RNA.65-201ENST00000362846 100 ntBASIC3.68□□□□□ -1.82
CHFRQ96EP1 Y_RNA.84-201ENST00000363011 104 ntBASIC3.68□□□□□ -1.82
CHFRQ96EP1 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CHFRQ96EP1 SNORA51.11-201ENST00000384442 131 ntBASIC3.68□□□□□ -1.82
CHFRQ96EP1 MIR517A-201ENST00000385001 87 ntBASIC3.68□□□□□ -1.82
CHFRQ96EP1 SNORD17-201ENST00000390930 237 ntBASIC3.68□□□□□ -1.82
CHFRQ96EP1 RNU2-25P-201ENST00000411041 191 ntBASIC3.68□□□□□ -1.82
CHFRQ96EP1 RNU6-130P-201ENST00000411112 103 ntBASIC3.68□□□□□ -1.82
CHFRQ96EP1 Z92545.1-201ENST00000411782 234 ntBASIC3.68□□□□□ -1.82
CHFRQ96EP1 AL451074.5-201ENST00000415894 435 ntBASIC3.68□□□□□ -1.82
CHFRQ96EP1 CALM2P2-201ENST00000428512 440 ntBASIC3.68□□□□□ -1.82
CHFRQ96EP1 AL353997.1-201ENST00000432936 108 ntBASIC3.68□□□□□ -1.82
CHFRQ96EP1 AC010655.1-201ENST00000449336 292 ntBASIC3.68□□□□□ -1.82
CHFRQ96EP1 SNORD97-201ENST00000459187 142 ntBASIC3.68□□□□□ -1.82
CHFRQ96EP1 RN7SL93P-201ENST00000463035 293 ntBASIC3.68□□□□□ -1.82
CHFRQ96EP1 HMGB1P22-201ENST00000505315 124 ntBASIC3.68□□□□□ -1.82
CHFRQ96EP1 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.68□□□□□ -1.82
CHFRQ96EP1 RNU4ATAC10P-201ENST00000516967 122 ntBASIC3.68□□□□□ -1.82
CHFRQ96EP1 AC109329.1-201ENST00000518744 317 ntBASIC3.68□□□□□ -1.82
CHFRQ96EP1 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC3.68□□□□□ -1.82
CHFRQ96EP1 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC3.68□□□□□ -1.82
CHFRQ96EP1 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.68□□□□□ -1.82
CHFRQ96EP1 MIR3186-201ENST00000577404 85 ntBASIC3.68□□□□□ -1.82
CHFRQ96EP1 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.68□□□□□ -1.82
CHFRQ96EP1 AC073410.2-201ENST00000603240 332 ntBASIC3.68□□□□□ -1.82
CHFRQ96EP1 YPEL5P2-201ENST00000605553 359 ntBASIC3.68□□□□□ -1.82
CHFRQ96EP1 U4.6-201ENST00000621618 127 ntBASIC3.68□□□□□ -1.82
CHFRQ96EP1 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.68□□□□□ -1.82
CHFRQ96EP1 AC002546.1-201ENST00000588041 2504 ntBASIC3.68□□□□□ -1.82
CHFRQ96EP1 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CHFRQ96EP1 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
CHFRQ96EP1 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.67□□□□□ -1.82
CHFRQ96EP1 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CHFRQ96EP1 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.67□□□□□ -1.82
CHFRQ96EP1 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CHFRQ96EP1 AC138393.1-203ENST00000327086 343 ntBASIC3.67□□□□□ -1.82
CHFRQ96EP1 Y_RNA.48-201ENST00000362710 103 ntBASIC3.67□□□□□ -1.82
CHFRQ96EP1 Y_RNA.237-201ENST00000364439 102 ntBASIC3.67□□□□□ -1.82
CHFRQ96EP1 SMIM11P1-201ENST00000369586 178 ntBASIC3.67□□□□□ -1.82
CHFRQ96EP1 RNU6-946P-201ENST00000383878 107 ntBASIC3.67□□□□□ -1.82
CHFRQ96EP1 RNU6-434P-201ENST00000384376 107 ntBASIC3.67□□□□□ -1.82
CHFRQ96EP1 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
CHFRQ96EP1 RNU1-101P-201ENST00000391171 127 ntBASIC3.67□□□□□ -1.82
CHFRQ96EP1 HMGN2P8-201ENST00000391458 268 ntBASIC3.67□□□□□ -1.82
CHFRQ96EP1 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CHFRQ96EP1 NDUFB4P4-201ENST00000404822 243 ntBASIC3.67□□□□□ -1.82
CHFRQ96EP1 AL603910.2-201ENST00000407268 136 ntBASIC3.67□□□□□ -1.82
CHFRQ96EP1 UBE2FP1-201ENST00000416536 447 ntBASIC3.67□□□□□ -1.82
CHFRQ96EP1 AL645568.3-201ENST00000433683 316 ntBASIC3.67□□□□□ -1.82
CHFRQ96EP1 AL138752.1-201ENST00000452964 351 ntBASIC3.67□□□□□ -1.82
CHFRQ96EP1 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.67□□□□□ -1.82
CHFRQ96EP1 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.67□□□□□ -1.82
CHFRQ96EP1 RPL32P34-201ENST00000486380 400 ntBASIC3.67□□□□□ -1.82
CHFRQ96EP1 Y_RNA.683-201ENST00000516508 93 ntBASIC3.67□□□□□ -1.82
CHFRQ96EP1 CYCSP27-201ENST00000527643 293 ntBASIC3.67□□□□□ -1.82
CHFRQ96EP1 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC3.67□□□□□ -1.82
CHFRQ96EP1 AC012669.1-201ENST00000603209 283 ntBASIC3.67□□□□□ -1.82
CHFRQ96EP1 AL138889.2-201ENST00000603883 242 ntBASIC3.67□□□□□ -1.82
CHFRQ96EP1 AL359547.2-201ENST00000615810 418 ntBASIC3.67□□□□□ -1.82
CHFRQ96EP1 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CHFRQ96EP1 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CHFRQ96EP1 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 85.9 ms