Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.5□□□□□ -2.01
VPS33AQ96AX1 AC008267.5-201ENST00000424928 265 ntBASIC2.5□□□□□ -2.01
VPS33AQ96AX1 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC2.5□□□□□ -2.01
VPS33AQ96AX1 AL135938.1-201ENST00000443141 297 ntBASIC2.5□□□□□ -2.01
VPS33AQ96AX1 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC2.5□□□□□ -2.01
VPS33AQ96AX1 SCARNA18-201ENST00000459004 134 ntBASIC2.5□□□□□ -2.01
VPS33AQ96AX1 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC2.5□□□□□ -2.01
VPS33AQ96AX1 RPS27P27-201ENST00000498779 255 ntBASIC2.5□□□□□ -2.01
VPS33AQ96AX1 RNU2-53P-201ENST00000516257 147 ntBASIC2.5□□□□□ -2.01
VPS33AQ96AX1 SNORA48.11-201ENST00000517015 89 ntBASIC2.5□□□□□ -2.01
VPS33AQ96AX1 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC2.5□□□□□ -2.01
VPS33AQ96AX1 CBX3P7-201ENST00000532876 502 ntBASIC2.5□□□□□ -2.01
VPS33AQ96AX1 AP003034.1-201ENST00000534621 422 ntBASIC2.5□□□□□ -2.01
VPS33AQ96AX1 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC2.5□□□□□ -2.01
VPS33AQ96AX1 NDUFAF4P1-201ENST00000559425 519 ntBASIC2.5□□□□□ -2.01
VPS33AQ96AX1 MIR1254-2-201ENST00000579553 63 ntBASIC2.5□□□□□ -2.01
VPS33AQ96AX1 MTATP6P3-201ENST00000581686 676 ntBASIC2.5□□□□□ -2.01
VPS33AQ96AX1 RPL30P11-203ENST00000598995 310 ntBASIC2.5□□□□□ -2.01
VPS33AQ96AX1 AL355297.2-201ENST00000604792 129 ntBASIC2.5□□□□□ -2.01
VPS33AQ96AX1 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC2.5□□□□□ -2.01
VPS33AQ96AX1 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
VPS33AQ96AX1 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.5□□□□□ -2.01
VPS33AQ96AX1 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.49□□□□□ -2.01
VPS33AQ96AX1 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.49□□□□□ -2.01
VPS33AQ96AX1 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
VPS33AQ96AX1 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
VPS33AQ96AX1 SNORD56.1-201ENST00000362913 68 ntBASIC2.49□□□□□ -2.01
VPS33AQ96AX1 SNORA67.1-201ENST00000364749 141 ntBASIC2.49□□□□□ -2.01
VPS33AQ96AX1 RNU6-1303P-201ENST00000364841 107 ntBASIC2.49□□□□□ -2.01
VPS33AQ96AX1 RNU6-996P-201ENST00000365438 107 ntBASIC2.49□□□□□ -2.01
VPS33AQ96AX1 SNORA44-201ENST00000384584 132 ntBASIC2.49□□□□□ -2.01
VPS33AQ96AX1 AL356057.3-201ENST00000402607 340 ntBASIC2.49□□□□□ -2.01
VPS33AQ96AX1 RNU4-55P-201ENST00000410731 137 ntBASIC2.49□□□□□ -2.01
VPS33AQ96AX1 RNA5SP21-201ENST00000410917 96 ntBASIC2.49□□□□□ -2.01
VPS33AQ96AX1 BTF3L4P1-201ENST00000413813 468 ntBASIC2.49□□□□□ -2.01
VPS33AQ96AX1 USP9YP20-201ENST00000419224 558 ntBASIC2.49□□□□□ -2.01
VPS33AQ96AX1 AL451074.3-201ENST00000437709 472 ntBASIC2.49□□□□□ -2.01
VPS33AQ96AX1 RPS12P2-201ENST00000439728 269 ntBASIC2.49□□□□□ -2.01
VPS33AQ96AX1 AC124916.1-201ENST00000444020 547 ntBASIC2.49□□□□□ -2.01
VPS33AQ96AX1 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC2.49□□□□□ -2.01
VPS33AQ96AX1 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC2.49□□□□□ -2.01
VPS33AQ96AX1 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.49□□□□□ -2.01
VPS33AQ96AX1 RNU4ATAC8P-201ENST00000516196 109 ntBASIC2.49□□□□□ -2.01
VPS33AQ96AX1 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.49□□□□□ -2.01
VPS33AQ96AX1 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
VPS33AQ96AX1 AC023050.3-201ENST00000541142 333 ntBASIC2.49□□□□□ -2.01
VPS33AQ96AX1 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
VPS33AQ96AX1 AC022080.3-201ENST00000544433 482 ntBASIC2.49□□□□□ -2.01
VPS33AQ96AX1 HIF1AP1-201ENST00000553642 175 ntBASIC2.49□□□□□ -2.01
VPS33AQ96AX1 AC009063.1-201ENST00000563342 702 ntBASIC2.49□□□□□ -2.01
VPS33AQ96AX1 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC2.49□□□□□ -2.01
VPS33AQ96AX1 AC012507.3-201ENST00000603556 477 ntBASIC2.49□□□□□ -2.01
VPS33AQ96AX1 MIR6798-201ENST00000612887 67 ntBASIC2.49□□□□□ -2.01
VPS33AQ96AX1 AC245884.12-201ENST00000615364 59 ntBASIC2.49□□□□□ -2.01
VPS33AQ96AX1 AC073534.2-201ENST00000620377 381 ntBASIC2.49□□□□□ -2.01
VPS33AQ96AX1 AC007792.1-201ENST00000623023 402 ntBASIC2.49□□□□□ -2.01
VPS33AQ96AX1 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC2.49□□□□□ -2.01
VPS33AQ96AX1 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC2.49□□□□□ -2.01
VPS33AQ96AX1 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
VPS33AQ96AX1 RNU6-655P-201ENST00000362858 107 ntBASIC2.48□□□□□ -2.01
VPS33AQ96AX1 RNU1-140P-201ENST00000365040 165 ntBASIC2.48□□□□□ -2.01
VPS33AQ96AX1 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC2.48□□□□□ -2.01
VPS33AQ96AX1 RPS4XP7-201ENST00000406274 780 ntBASIC2.48□□□□□ -2.01
VPS33AQ96AX1 AC087499.2-201ENST00000432861 149 ntBASIC2.48□□□□□ -2.01
VPS33AQ96AX1 AC011816.1-201ENST00000441346 546 ntBASIC2.48□□□□□ -2.01
VPS33AQ96AX1 AC073415.1-201ENST00000449240 153 ntBASIC2.48□□□□□ -2.01
VPS33AQ96AX1 NDUFAF4P3-201ENST00000456468 525 ntBASIC2.48□□□□□ -2.01
VPS33AQ96AX1 AL163973.1-201ENST00000484753 577 ntBASIC2.48□□□□□ -2.01
VPS33AQ96AX1 RPL23AP49-201ENST00000492925 468 ntBASIC2.48□□□□□ -2.01
VPS33AQ96AX1 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC2.48□□□□□ -2.01
VPS33AQ96AX1 AC093534.1-201ENST00000504977 132 ntBASIC2.48□□□□□ -2.01
VPS33AQ96AX1 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC2.48□□□□□ -2.01
VPS33AQ96AX1 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.48□□□□□ -2.01
VPS33AQ96AX1 RNA5SP82-201ENST00000516707 92 ntBASIC2.48□□□□□ -2.01
VPS33AQ96AX1 AC109479.2-201ENST00000517842 174 ntBASIC2.48□□□□□ -2.01
VPS33AQ96AX1 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
VPS33AQ96AX1 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC2.48□□□□□ -2.01
VPS33AQ96AX1 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.48□□□□□ -2.01
VPS33AQ96AX1 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
VPS33AQ96AX1 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC2.48□□□□□ -2.01
VPS33AQ96AX1 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC2.48□□□□□ -2.01
VPS33AQ96AX1 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC2.48□□□□□ -2.01
VPS33AQ96AX1 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC2.48□□□□□ -2.01
VPS33AQ96AX1 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC2.48□□□□□ -2.01
VPS33AQ96AX1 MIR4325-201ENST00000583049 90 ntBASIC2.48□□□□□ -2.01
VPS33AQ96AX1 AC004223.2-201ENST00000590309 544 ntBASIC2.48□□□□□ -2.01
VPS33AQ96AX1 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC2.48□□□□□ -2.01
VPS33AQ96AX1 AC091805.2-201ENST00000603848 235 ntBASIC2.48□□□□□ -2.01
VPS33AQ96AX1 AC017083.3-201ENST00000609955 700 ntBASIC2.48□□□□□ -2.01
VPS33AQ96AX1 AC009090.3-201ENST00000616553 565 ntBASIC2.48□□□□□ -2.01
VPS33AQ96AX1 AC048344.4-201ENST00000619744 527 ntBASIC2.48□□□□□ -2.01
VPS33AQ96AX1 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC2.48□□□□□ -2.01
VPS33AQ96AX1 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
VPS33AQ96AX1 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
VPS33AQ96AX1 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.48□□□□□ -2.01
VPS33AQ96AX1 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
VPS33AQ96AX1 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.47□□□□□ -2.01
VPS33AQ96AX1 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.47□□□□□ -2.01
VPS33AQ96AX1 RNU6-1210P-201ENST00000363775 107 ntBASIC2.47□□□□□ -2.01
VPS33AQ96AX1 MIR524-201ENST00000385242 87 ntBASIC2.47□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 87.6 ms