| CLUAP1 | Q96AJ1 | AC004160.1-212 | ENST00000421121 | 2078 nt | TSL 1 (best) BASIC | 5.11 | □□□□□ -1.59 | | |
| CLUAP1 | Q96AJ1 | FAT3-204 | ENST00000525166 | 18699 nt | TSL 5 BASIC | 5.11 | □□□□□ -1.59 | | |
| CLUAP1 | Q96AJ1 | POLR2B-201 | ENST00000314595 | 3748 nt | APPRIS P1 TSL 1 (best) BASIC | 5.11 | □□□□□ -1.59 | | |
| CLUAP1 | Q96AJ1 | Y_RNA.307-201 | ENST00000365022 | 117 nt | BASIC | 5.11 | □□□□□ -1.59 | | |
| CLUAP1 | Q96AJ1 | TRAJ59-201 | ENST00000390480 | 54 nt | APPRIS P1 BASIC | 5.11 | □□□□□ -1.59 | | |
| CLUAP1 | Q96AJ1 | BX679664.1-201 | ENST00000434429 | 253 nt | BASIC | 5.11 | □□□□□ -1.59 | | |
| CLUAP1 | Q96AJ1 | LINC01162-201 | ENST00000447262 | 447 nt | TSL 5 BASIC | 5.11 | □□□□□ -1.59 | | |
| CLUAP1 | Q96AJ1 | SNORD19.2-201 | ENST00000516978 | 73 nt | BASIC | 5.11 | □□□□□ -1.59 | | |
| CLUAP1 | Q96AJ1 | SNORA31.23-201 | ENST00000517219 | 133 nt | BASIC | 5.11 | □□□□□ -1.59 | | |
| CLUAP1 | Q96AJ1 | AC068992.1-201 | ENST00000521411 | 543 nt | TSL 5 BASIC | 5.11 | □□□□□ -1.59 | | |
| CLUAP1 | Q96AJ1 | MRPS36P4-201 | ENST00000534436 | 298 nt | BASIC | 5.11 | □□□□□ -1.59 | | |
| CLUAP1 | Q96AJ1 | AC023157.2-201 | ENST00000540596 | 141 nt | BASIC | 5.11 | □□□□□ -1.59 | | |
| CLUAP1 | Q96AJ1 | AC006199.1-201 | ENST00000548728 | 219 nt | BASIC | 5.11 | □□□□□ -1.59 | | |
| CLUAP1 | Q96AJ1 | AC097467.3-205 | ENST00000597955 | 594 nt | TSL 5 BASIC | 5.11 | □□□□□ -1.59 | | |
| CLUAP1 | Q96AJ1 | AC073073.2-201 | ENST00000609827 | 2578 nt | BASIC | 5.11 | □□□□□ -1.59 | | |
| CLUAP1 | Q96AJ1 | PRKACB-208 | ENST00000394839 | 4200 nt | TSL 2 BASIC | 5.11 | □□□□□ -1.59 | | |
| CLUAP1 | Q96AJ1 | TRMT10A-203 | ENST00000394877 | 3516 nt | APPRIS P1 TSL 2 BASIC | 5.11 | □□□□□ -1.59 | | |
| CLUAP1 | Q96AJ1 | KCNJ16-201 | ENST00000283936 | 4062 nt | APPRIS P1 TSL 1 (best) BASIC | 5.11 | □□□□□ -1.59 | | |
| CLUAP1 | Q96AJ1 | SLC5A12-202 | ENST00000396005 | 6250 nt | APPRIS P1 TSL 1 (best) BASIC | 5.11 | □□□□□ -1.59 | | |
| CLUAP1 | Q96AJ1 | NCOA1-201 | ENST00000288599 | 6952 nt | APPRIS ALT2 TSL 1 (best) BASIC | 5.11 | □□□□□ -1.59 | | |
| CLUAP1 | Q96AJ1 | IL33-201 | ENST00000381434 | 2641 nt | APPRIS P1 TSL 1 (best) BASIC | 5.1 | □□□□□ -1.59 | | |
| CLUAP1 | Q96AJ1 | ZRANB3-201 | ENST00000264159 | 4046 nt | APPRIS P3 TSL 1 (best) BASIC | 5.1 | □□□□□ -1.59 | | |
| CLUAP1 | Q96AJ1 | AC092268.1-201 | ENST00000342691 | 405 nt | BASIC | 5.1 | □□□□□ -1.59 | | |
| CLUAP1 | Q96AJ1 | RNA5SP399-201 | ENST00000364003 | 117 nt | BASIC | 5.1 | □□□□□ -1.59 | | |
| CLUAP1 | Q96AJ1 | Y_RNA.439-201 | ENST00000384119 | 94 nt | BASIC | 5.1 | □□□□□ -1.59 | | |
| CLUAP1 | Q96AJ1 | Y_RNA.458-201 | ENST00000384240 | 102 nt | BASIC | 5.1 | □□□□□ -1.59 | | |
| CLUAP1 | Q96AJ1 | AL356095.1-201 | ENST00000417217 | 199 nt | BASIC | 5.1 | □□□□□ -1.59 | | |
| CLUAP1 | Q96AJ1 | FBXL13-204 | ENST00000436908 | 2577 nt | TSL 5 BASIC | 5.1 | □□□□□ -1.59 | | |
| CLUAP1 | Q96AJ1 | AP002884.2-201 | ENST00000471647 | 395 nt | BASIC | 5.1 | □□□□□ -1.59 | | |
| CLUAP1 | Q96AJ1 | RN7SL271P-201 | ENST00000487601 | 295 nt | BASIC | 5.1 | □□□□□ -1.59 | | |
| CLUAP1 | Q96AJ1 | RNU6-397P-201 | ENST00000516226 | 104 nt | BASIC | 5.1 | □□□□□ -1.59 | | |
| CLUAP1 | Q96AJ1 | OR6C2-203 | ENST00000641516 | 1682 nt | APPRIS P1 BASIC | 5.1 | □□□□□ -1.59 | | |
| CLUAP1 | Q96AJ1 | MACF1-231 | ENST00000564288 | 24828 nt | APPRIS ALT2 TSL 5 BASIC | 5.1 | □□□□□ -1.59 | | |
| CLUAP1 | Q96AJ1 | SCN3A-209 | ENST00000639244 | 8854 nt | TSL 5 BASIC | 5.1 | □□□□□ -1.59 | | |
| CLUAP1 | Q96AJ1 | C2orf16-202 | ENST00000447166 | 16401 nt | APPRIS ALT2 TSL 3 BASIC | 5.1 | □□□□□ -1.59 | | |
| CLUAP1 | Q96AJ1 | EVI2A-201 | ENST00000247270 | 1860 nt | APPRIS P3 TSL 2 BASIC | 5.09 | □□□□□ -1.59 | | |
| CLUAP1 | Q96AJ1 | U2SURP-214 | ENST00000493598 | 3491 nt | TSL 5 BASIC | 5.09 | □□□□□ -1.59 | | |
| CLUAP1 | Q96AJ1 | SPAG17-201 | ENST00000336338 | 6924 nt | APPRIS P2 TSL 1 (best) BASIC | 5.09 | □□□□□ -1.59 | | |
| CLUAP1 | Q96AJ1 | AC004944.1-201 | ENST00000517807 | 3059 nt | BASIC | 5.09 | □□□□□ -1.59 | | |
| CLUAP1 | Q96AJ1 | IL6ST-205 | ENST00000381294 | 2574 nt | TSL 1 (best) BASIC | 5.09 | □□□□□ -1.59 | | |
| CLUAP1 | Q96AJ1 | SNORA60-201 | ENST00000362396 | 134 nt | BASIC | 5.09 | □□□□□ -1.59 | | |
| CLUAP1 | Q96AJ1 | RNU6-379P-201 | ENST00000363813 | 104 nt | BASIC | 5.09 | □□□□□ -1.59 | | |
| CLUAP1 | Q96AJ1 | Y_RNA.350-201 | ENST00000365409 | 98 nt | BASIC | 5.09 | □□□□□ -1.59 | | |
| CLUAP1 | Q96AJ1 | Y_RNA.518-201 | ENST00000384552 | 113 nt | BASIC | 5.09 | □□□□□ -1.59 | | |
| CLUAP1 | Q96AJ1 | SNAP23-203 | ENST00000397138 | 477 nt | TSL 1 (best) BASIC | 5.09 | □□□□□ -1.59 | | |
| CLUAP1 | Q96AJ1 | RNA5SP317-201 | ENST00000410176 | 116 nt | BASIC | 5.09 | □□□□□ -1.59 | | |
| CLUAP1 | Q96AJ1 | RNA5SP311-201 | ENST00000411290 | 116 nt | BASIC | 5.09 | □□□□□ -1.59 | | |
| CLUAP1 | Q96AJ1 | AC245291.1-201 | ENST00000419501 | 328 nt | BASIC | 5.09 | □□□□□ -1.59 | | |
| CLUAP1 | Q96AJ1 | LINC00375-201 | ENST00000433074 | 601 nt | TSL 5 BASIC | 5.09 | □□□□□ -1.59 | | |
| CLUAP1 | Q96AJ1 | RPL23AP22-201 | ENST00000437556 | 453 nt | BASIC | 5.09 | □□□□□ -1.59 | | |
| CLUAP1 | Q96AJ1 | SNORA71B-202 | ENST00000439232 | 272 nt | BASIC | 5.09 | □□□□□ -1.59 | | |
| CLUAP1 | Q96AJ1 | RNU6-1132P-201 | ENST00000459214 | 107 nt | BASIC | 5.09 | □□□□□ -1.59 | | |
| CLUAP1 | Q96AJ1 | RPL30P1-201 | ENST00000488676 | 339 nt | BASIC | 5.09 | □□□□□ -1.59 | | |
| CLUAP1 | Q96AJ1 | RPS29P20-201 | ENST00000489592 | 171 nt | BASIC | 5.09 | □□□□□ -1.59 | | |
| CLUAP1 | Q96AJ1 | RNA5SP315-201 | ENST00000516340 | 116 nt | BASIC | 5.09 | □□□□□ -1.59 | | |
| CLUAP1 | Q96AJ1 | RNA5SP312-201 | ENST00000517068 | 116 nt | BASIC | 5.09 | □□□□□ -1.59 | | |
| CLUAP1 | Q96AJ1 | RGS5-206 | ENST00000527988 | 373 nt | TSL 1 (best) BASIC | 5.09 | □□□□□ -1.59 | | |
| CLUAP1 | Q96AJ1 | AP003733.2-201 | ENST00000529409 | 171 nt | BASIC | 5.09 | □□□□□ -1.59 | | |
| CLUAP1 | Q96AJ1 | MIR5571-201 | ENST00000577998 | 113 nt | BASIC | 5.09 | □□□□□ -1.59 | | |
| CLUAP1 | Q96AJ1 | AC010928.2-201 | ENST00000588017 | 287 nt | BASIC | 5.09 | □□□□□ -1.59 | | |
| CLUAP1 | Q96AJ1 | GALP-203 | ENST00000590002 | 150 nt | TSL 1 (best) BASIC | 5.09 | □□□□□ -1.59 | | |
| CLUAP1 | Q96AJ1 | AC022335.1-204 | ENST00000590779 | 600 nt | APPRIS ALT2 TSL 2 BASIC | 5.09 | □□□□□ -1.59 | | |
| CLUAP1 | Q96AJ1 | Y_RNA.772-201 | ENST00000606692 | 102 nt | BASIC | 5.09 | □□□□□ -1.59 | | |
| CLUAP1 | Q96AJ1 | OR56A1-203 | ENST00000641900 | 8448 nt | APPRIS P1 BASIC | 5.09 | □□□□□ -1.59 | | |
| CLUAP1 | Q96AJ1 | TMCO5A-203 | ENST00000558158 | 2894 nt | APPRIS ALT2 TSL 3 BASIC | 5.09 | □□□□□ -1.6 | | |
| CLUAP1 | Q96AJ1 | BCHE-201 | ENST00000264381 | 2454 nt | APPRIS P1 TSL 1 (best) BASIC | 5.08 | □□□□□ -1.6 | | |
| CLUAP1 | Q96AJ1 | MBNL1-220 | ENST00000493459 | 4205 nt | TSL 1 (best) BASIC | 5.08 | □□□□□ -1.6 | | |
| CLUAP1 | Q96AJ1 | Y_RNA.222-201 | ENST00000364264 | 102 nt | BASIC | 5.08 | □□□□□ -1.6 | | |
| CLUAP1 | Q96AJ1 | Y_RNA.376-201 | ENST00000365638 | 108 nt | BASIC | 5.08 | □□□□□ -1.6 | | |
| CLUAP1 | Q96AJ1 | MIR544A-201 | ENST00000384855 | 91 nt | BASIC | 5.08 | □□□□□ -1.6 | | |
| CLUAP1 | Q96AJ1 | RPL21P65-201 | ENST00000406094 | 466 nt | BASIC | 5.08 | □□□□□ -1.6 | | |
| CLUAP1 | Q96AJ1 | C1orf195-201 | ENST00000424792 | 255 nt | TSL 2 BASIC | 5.08 | □□□□□ -1.6 | | |
| CLUAP1 | Q96AJ1 | AC069257.1-202 | ENST00000425275 | 422 nt | TSL 3 BASIC | 5.08 | □□□□□ -1.6 | | |
| CLUAP1 | Q96AJ1 | Z82188.1-201 | ENST00000436709 | 154 nt | BASIC | 5.08 | □□□□□ -1.6 | | |
| CLUAP1 | Q96AJ1 | SNORD127-201 | ENST00000458892 | 86 nt | BASIC | 5.08 | □□□□□ -1.6 | | |
| CLUAP1 | Q96AJ1 | snoU13.28-201 | ENST00000459235 | 104 nt | BASIC | 5.08 | □□□□□ -1.6 | | |
| CLUAP1 | Q96AJ1 | TOMM22P6-201 | ENST00000465035 | 409 nt | BASIC | 5.08 | □□□□□ -1.6 | | |
| CLUAP1 | Q96AJ1 | AC087477.1-201 | ENST00000465747 | 340 nt | BASIC | 5.08 | □□□□□ -1.6 | | |
| CLUAP1 | Q96AJ1 | AC126121.2-201 | ENST00000486137 | 698 nt | TSL 3 BASIC | 5.08 | □□□□□ -1.6 | | |
| CLUAP1 | Q96AJ1 | ACA59.2-201 | ENST00000517061 | 156 nt | BASIC | 5.08 | □□□□□ -1.6 | | |
| CLUAP1 | Q96AJ1 | AC007619.1-201 | ENST00000544086 | 412 nt | TSL 5 BASIC | 5.08 | □□□□□ -1.6 | | |
| CLUAP1 | Q96AJ1 | AC093023.1-201 | ENST00000547375 | 507 nt | BASIC | 5.08 | □□□□□ -1.6 | | |
| CLUAP1 | Q96AJ1 | AC007375.1-201 | ENST00000554513 | 578 nt | BASIC | 5.08 | □□□□□ -1.6 | | |
| CLUAP1 | Q96AJ1 | LINC02079-201 | ENST00000582518 | 294 nt | TSL 2 BASIC | 5.08 | □□□□□ -1.6 | | |
| CLUAP1 | Q96AJ1 | PNPLA8-204 | ENST00000426128 | 4268 nt | TSL 5 BASIC | 5.08 | □□□□□ -1.6 | | |
| CLUAP1 | Q96AJ1 | CCNH-206 | ENST00000508855 | 2391 nt | TSL 1 (best) BASIC | 5.08 | □□□□□ -1.6 | | |
| CLUAP1 | Q96AJ1 | TTC21B-AS1-201 | ENST00000440322 | 2260 nt | TSL 4 BASIC | 5.08 | □□□□□ -1.6 | | |
| CLUAP1 | Q96AJ1 | CAB39L-206 | ENST00000410043 | 1627 nt | APPRIS P1 TSL 1 (best) BASIC | 5.08 | □□□□□ -1.6 | | |
| CLUAP1 | Q96AJ1 | CNOT2-231 | ENST00000551483 | 4753 nt | TSL 2 BASIC | 5.08 | □□□□□ -1.6 | | |
| CLUAP1 | Q96AJ1 | ERICH3-AS1-202 | ENST00000612390 | 4874 nt | TSL 1 (best) BASIC | 5.07 | □□□□□ -1.6 | | |
| CLUAP1 | Q96AJ1 | AC018529.3-201 | ENST00000624212 | 2254 nt | BASIC | 5.07 | □□□□□ -1.6 | | |
| CLUAP1 | Q96AJ1 | KLRD1-204 | ENST00000381908 | 15549 nt | APPRIS P4 TSL 1 (best) BASIC | 5.07 | □□□□□ -1.6 | | |
| CLUAP1 | Q96AJ1 | FAM169A-201 | ENST00000389156 | 5990 nt | APPRIS P1 TSL 1 (best) BASIC | 5.07 | □□□□□ -1.6 | | |
| CLUAP1 | Q96AJ1 | LINC00670-201 | ENST00000313495 | 2953 nt | TSL 2 BASIC | 5.07 | □□□□□ -1.6 | | |
| CLUAP1 | Q96AJ1 | MIR372-201 | ENST00000362225 | 67 nt | BASIC | 5.07 | □□□□□ -1.6 | | |
| CLUAP1 | Q96AJ1 | Y_RNA.64-201 | ENST00000362845 | 102 nt | BASIC | 5.07 | □□□□□ -1.6 | | |
| CLUAP1 | Q96AJ1 | RNU1-140P-201 | ENST00000365040 | 165 nt | BASIC | 5.07 | □□□□□ -1.6 | | |
| CLUAP1 | Q96AJ1 | RFX3-203 | ENST00000381984 | 364 nt | TSL 3 BASIC | 5.07 | □□□□□ -1.6 | | |
| CLUAP1 | Q96AJ1 | SNORA29-201 | ENST00000384183 | 140 nt | BASIC | 5.07 | □□□□□ -1.6 | | |
| CLUAP1 | Q96AJ1 | MIR32-201 | ENST00000384965 | 70 nt | BASIC | 5.07 | □□□□□ -1.6 | | |