Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 AC012468.1-201ENST00000604888 430 ntBASIC4.87□□□□□ -1.63
RNF135Q8IUD6 SNX18P1Y-201ENST00000616231 511 ntBASIC4.87□□□□□ -1.63
RNF135Q8IUD6 AC073349.3-201ENST00000617616 186 ntBASIC4.87□□□□□ -1.63
RNF135Q8IUD6 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
RNF135Q8IUD6 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
RNF135Q8IUD6 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
RNF135Q8IUD6 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
RNF135Q8IUD6 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
RNF135Q8IUD6 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.86□□□□□ -1.63
RNF135Q8IUD6 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.86□□□□□ -1.63
RNF135Q8IUD6 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
RNF135Q8IUD6 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.86□□□□□ -1.63
RNF135Q8IUD6 Y_RNA.136-201ENST00000363444 102 ntBASIC4.86□□□□□ -1.63
RNF135Q8IUD6 RNU6-525P-201ENST00000363685 104 ntBASIC4.86□□□□□ -1.63
RNF135Q8IUD6 SNORD115-8-201ENST00000363856 82 ntBASIC4.86□□□□□ -1.63
RNF135Q8IUD6 Y_RNA.261-201ENST00000364631 102 ntBASIC4.86□□□□□ -1.63
RNF135Q8IUD6 SNORD115-38-201ENST00000365037 82 ntBASIC4.86□□□□□ -1.63
RNF135Q8IUD6 Y_RNA.333-201ENST00000365274 102 ntBASIC4.86□□□□□ -1.63
RNF135Q8IUD6 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.86□□□□□ -1.63
RNF135Q8IUD6 RPL36AP10-201ENST00000421785 322 ntBASIC4.86□□□□□ -1.63
RNF135Q8IUD6 POLR2KP2-201ENST00000438155 177 ntBASIC4.86□□□□□ -1.63
RNF135Q8IUD6 HMGB3P8-201ENST00000449709 577 ntBASIC4.86□□□□□ -1.63
RNF135Q8IUD6 NDUFS5P3-201ENST00000450668 321 ntBASIC4.86□□□□□ -1.63
RNF135Q8IUD6 AC007395.1-201ENST00000451333 677 ntBASIC4.86□□□□□ -1.63
RNF135Q8IUD6 RN7SL517P-201ENST00000462240 305 ntBASIC4.86□□□□□ -1.63
RNF135Q8IUD6 RPS4XP22-201ENST00000480755 780 ntBASIC4.86□□□□□ -1.63
RNF135Q8IUD6 SRI-210ENST00000490437 570 ntTSL 2 BASIC4.86□□□□□ -1.63
RNF135Q8IUD6 AC016632.1-201ENST00000503994 196 ntBASIC4.86□□□□□ -1.63
RNF135Q8IUD6 AC023141.12-201ENST00000512399 199 ntBASIC4.86□□□□□ -1.63
RNF135Q8IUD6 SNORA40.9-201ENST00000515895 93 ntBASIC4.86□□□□□ -1.63
RNF135Q8IUD6 RNU1-45P-201ENST00000517191 141 ntBASIC4.86□□□□□ -1.63
RNF135Q8IUD6 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC4.86□□□□□ -1.63
RNF135Q8IUD6 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC4.86□□□□□ -1.63
RNF135Q8IUD6 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC4.86□□□□□ -1.63
RNF135Q8IUD6 AC006001.4-201ENST00000622243 395 ntBASIC4.86□□□□□ -1.63
RNF135Q8IUD6 MIR492-201ENST00000638676 116 ntBASIC4.86□□□□□ -1.63
RNF135Q8IUD6 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
RNF135Q8IUD6 LINC01355-201ENST00000566551 5444 ntBASIC4.86□□□□□ -1.63
RNF135Q8IUD6 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
RNF135Q8IUD6 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
RNF135Q8IUD6 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
RNF135Q8IUD6 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.86□□□□□ -1.63
RNF135Q8IUD6 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
RNF135Q8IUD6 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC4.85□□□□□ -1.63
RNF135Q8IUD6 FAM35BP-202ENST00000497389 3337 ntBASIC4.85□□□□□ -1.63
RNF135Q8IUD6 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
RNF135Q8IUD6 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
RNF135Q8IUD6 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
RNF135Q8IUD6 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
RNF135Q8IUD6 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.85□□□□□ -1.63
RNF135Q8IUD6 AL592182.3-201ENST00000642132 3304 ntBASIC4.85□□□□□ -1.63
RNF135Q8IUD6 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
RNF135Q8IUD6 SPRR2C-201ENST00000290702 219 ntBASIC4.85□□□□□ -1.63
RNF135Q8IUD6 RNU6-884P-201ENST00000363889 107 ntBASIC4.85□□□□□ -1.63
RNF135Q8IUD6 Y_RNA.215-201ENST00000364204 112 ntBASIC4.85□□□□□ -1.63
RNF135Q8IUD6 Y_RNA.331-201ENST00000365267 102 ntBASIC4.85□□□□□ -1.63
RNF135Q8IUD6 MIR544A-201ENST00000384855 91 ntBASIC4.85□□□□□ -1.63
RNF135Q8IUD6 U3.19-201ENST00000390893 196 ntBASIC4.85□□□□□ -1.63
RNF135Q8IUD6 MIR888-201ENST00000401186 77 ntBASIC4.85□□□□□ -1.63
RNF135Q8IUD6 RPS20P14-201ENST00000412545 360 ntBASIC4.85□□□□□ -1.63
RNF135Q8IUD6 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC4.85□□□□□ -1.63
RNF135Q8IUD6 TRAPPC2P4-201ENST00000421750 331 ntBASIC4.85□□□□□ -1.63
RNF135Q8IUD6 AC010154.1-201ENST00000425857 269 ntBASIC4.85□□□□□ -1.63
RNF135Q8IUD6 AL358075.3-201ENST00000426289 226 ntBASIC4.85□□□□□ -1.63
RNF135Q8IUD6 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.85□□□□□ -1.63
RNF135Q8IUD6 MRPS10P1-201ENST00000448483 130 ntBASIC4.85□□□□□ -1.63
RNF135Q8IUD6 S100A11P1-201ENST00000477525 312 ntBASIC4.85□□□□□ -1.63
RNF135Q8IUD6 RNU6-426P-201ENST00000516464 97 ntBASIC4.85□□□□□ -1.63
RNF135Q8IUD6 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
RNF135Q8IUD6 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.85□□□□□ -1.63
RNF135Q8IUD6 RN7SL435P-201ENST00000584418 282 ntBASIC4.85□□□□□ -1.63
RNF135Q8IUD6 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.85□□□□□ -1.63
RNF135Q8IUD6 KLKP1-201ENST00000595979 403 ntBASIC4.85□□□□□ -1.63
RNF135Q8IUD6 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
RNF135Q8IUD6 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
RNF135Q8IUD6 AL109809.4-201ENST00000603520 2185 ntBASIC4.85□□□□□ -1.63
RNF135Q8IUD6 AL672167.1-203ENST00000641299 2975 ntBASIC4.85□□□□□ -1.63
RNF135Q8IUD6 AC126323.6-202ENST00000568092 3511 ntBASIC4.85□□□□□ -1.63
RNF135Q8IUD6 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
RNF135Q8IUD6 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.85□□□□□ -1.63
RNF135Q8IUD6 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
RNF135Q8IUD6 OFD1P6Y-202ENST00000451061 2724 ntBASIC4.84□□□□□ -1.63
RNF135Q8IUD6 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.84□□□□□ -1.63
RNF135Q8IUD6 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
RNF135Q8IUD6 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC4.84□□□□□ -1.63
RNF135Q8IUD6 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
RNF135Q8IUD6 AL445487.1-201ENST00000415694 1580 ntBASIC4.84□□□□□ -1.63
RNF135Q8IUD6 RNU6-1141P-201ENST00000364520 107 ntBASIC4.84□□□□□ -1.63
RNF135Q8IUD6 MIR186-201ENST00000384988 86 ntBASIC4.84□□□□□ -1.63
RNF135Q8IUD6 FTH1P15-201ENST00000406984 280 ntBASIC4.84□□□□□ -1.63
RNF135Q8IUD6 RNU6-257P-201ENST00000410238 98 ntBASIC4.84□□□□□ -1.63
RNF135Q8IUD6 RN7SKP177-201ENST00000410567 355 ntBASIC4.84□□□□□ -1.63
RNF135Q8IUD6 RN7SKP61-201ENST00000410642 295 ntBASIC4.84□□□□□ -1.63
RNF135Q8IUD6 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC4.84□□□□□ -1.63
RNF135Q8IUD6 FTH1P6-201ENST00000430768 320 ntBASIC4.84□□□□□ -1.63
RNF135Q8IUD6 AC011998.1-201ENST00000433403 117 ntBASIC4.84□□□□□ -1.63
RNF135Q8IUD6 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC4.84□□□□□ -1.63
RNF135Q8IUD6 AC020890.1-201ENST00000491837 504 ntBASIC4.84□□□□□ -1.63
RNF135Q8IUD6 RNA5SP468-201ENST00000516782 93 ntBASIC4.84□□□□□ -1.63
RNF135Q8IUD6 Y_RNA.719-201ENST00000517156 106 ntBASIC4.84□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 157 ms