Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
SHFQ7M4L6 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
SHFQ7M4L6 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
SHFQ7M4L6 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
SHFQ7M4L6 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
SHFQ7M4L6 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC2.78□□□□□ -1.96
SHFQ7M4L6 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
SHFQ7M4L6 Y_RNA.58-201ENST00000362807 102 ntBASIC2.78□□□□□ -1.96
SHFQ7M4L6 Y_RNA.154-201ENST00000363624 102 ntBASIC2.78□□□□□ -1.96
SHFQ7M4L6 RNU1-33P-201ENST00000364249 162 ntBASIC2.78□□□□□ -1.96
SHFQ7M4L6 RNY3P1-201ENST00000365085 102 ntBASIC2.78□□□□□ -1.96
SHFQ7M4L6 RNY3-201ENST00000365484 102 ntBASIC2.78□□□□□ -1.96
SHFQ7M4L6 Y_RNA.490-201ENST00000384413 102 ntBASIC2.78□□□□□ -1.96
SHFQ7M4L6 MIR200C-201ENST00000384980 68 ntBASIC2.78□□□□□ -1.96
SHFQ7M4L6 RPS15AP5-201ENST00000436276 388 ntBASIC2.78□□□□□ -1.96
SHFQ7M4L6 FABP5P14-201ENST00000437273 393 ntBASIC2.78□□□□□ -1.96
SHFQ7M4L6 AL031274.1-201ENST00000450334 232 ntBASIC2.78□□□□□ -1.96
SHFQ7M4L6 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
SHFQ7M4L6 RNU7-187P-201ENST00000458985 68 ntBASIC2.78□□□□□ -1.96
SHFQ7M4L6 AP004217.1-201ENST00000480579 346 ntBASIC2.78□□□□□ -1.96
SHFQ7M4L6 RN7SL20P-201ENST00000488827 297 ntBASIC2.78□□□□□ -1.96
SHFQ7M4L6 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC2.78□□□□□ -1.96
SHFQ7M4L6 RNU6-581P-201ENST00000516214 105 ntBASIC2.78□□□□□ -1.96
SHFQ7M4L6 AC023632.4-201ENST00000517783 191 ntBASIC2.78□□□□□ -1.96
SHFQ7M4L6 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
SHFQ7M4L6 AP004607.1-201ENST00000524456 203 ntBASIC2.78□□□□□ -1.96
SHFQ7M4L6 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC2.78□□□□□ -1.96
SHFQ7M4L6 UBE2Q2P8-201ENST00000560644 102 ntBASIC2.78□□□□□ -1.96
SHFQ7M4L6 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
SHFQ7M4L6 AP000787.2-201ENST00000604432 568 ntBASIC2.78□□□□□ -1.96
SHFQ7M4L6 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.78□□□□□ -1.96
SHFQ7M4L6 USP12-203ENST00000620323 349 ntTSL 3 BASIC2.78□□□□□ -1.96
SHFQ7M4L6 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC2.78□□□□□ -1.96
SHFQ7M4L6 AL359757.2-201ENST00000624309 274 ntBASIC2.78□□□□□ -1.96
SHFQ7M4L6 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
SHFQ7M4L6 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.78□□□□□ -1.96
SHFQ7M4L6 ADAM3A-203ENST00000461344 2157 ntBASIC2.78□□□□□ -1.96
SHFQ7M4L6 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
SHFQ7M4L6 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
SHFQ7M4L6 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
SHFQ7M4L6 CPD-202ENST00000543464 4007 ntTSL 2 BASIC2.77□□□□□ -1.97
SHFQ7M4L6 Y_RNA.67-201ENST00000362870 100 ntBASIC2.77□□□□□ -1.97
SHFQ7M4L6 RNU6-428P-201ENST00000362942 107 ntBASIC2.77□□□□□ -1.97
SHFQ7M4L6 RNU5E-7P-201ENST00000365290 117 ntBASIC2.77□□□□□ -1.97
SHFQ7M4L6 RNU6-827P-201ENST00000365553 106 ntBASIC2.77□□□□□ -1.97
SHFQ7M4L6 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
SHFQ7M4L6 MIR490-201ENST00000384865 128 ntBASIC2.77□□□□□ -1.97
SHFQ7M4L6 RPL37P10-201ENST00000412884 288 ntBASIC2.77□□□□□ -1.97
SHFQ7M4L6 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.77□□□□□ -1.97
SHFQ7M4L6 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
SHFQ7M4L6 AL365496.1-201ENST00000426885 215 ntBASIC2.77□□□□□ -1.97
SHFQ7M4L6 AC091286.1-201ENST00000431233 461 ntBASIC2.77□□□□□ -1.97
SHFQ7M4L6 AL645568.3-201ENST00000433683 316 ntBASIC2.77□□□□□ -1.97
SHFQ7M4L6 GOT2P5-201ENST00000433995 546 ntBASIC2.77□□□□□ -1.97
SHFQ7M4L6 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC2.77□□□□□ -1.97
SHFQ7M4L6 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC2.77□□□□□ -1.97
SHFQ7M4L6 CYCSP35-201ENST00000451978 304 ntBASIC2.77□□□□□ -1.97
SHFQ7M4L6 AC013470.1-201ENST00000453438 462 ntBASIC2.77□□□□□ -1.97
SHFQ7M4L6 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
SHFQ7M4L6 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC2.77□□□□□ -1.97
SHFQ7M4L6 Y_RNA.635-201ENST00000459041 101 ntBASIC2.77□□□□□ -1.97
SHFQ7M4L6 RN7SL542P-201ENST00000467147 294 ntBASIC2.77□□□□□ -1.97
SHFQ7M4L6 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC2.77□□□□□ -1.97
SHFQ7M4L6 AC113155.1-201ENST00000511141 769 ntBASIC2.77□□□□□ -1.97
SHFQ7M4L6 RPL39P5-202ENST00000512505 151 ntBASIC2.77□□□□□ -1.97
SHFQ7M4L6 RN7SKP43-201ENST00000516173 320 ntBASIC2.77□□□□□ -1.97
SHFQ7M4L6 SNORA43.2-201ENST00000516652 128 ntBASIC2.77□□□□□ -1.97
SHFQ7M4L6 AC022634.1-201ENST00000520765 532 ntBASIC2.77□□□□□ -1.97
SHFQ7M4L6 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.77□□□□□ -1.97
SHFQ7M4L6 HPRT1P3-201ENST00000539521 576 ntBASIC2.77□□□□□ -1.97
SHFQ7M4L6 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC2.77□□□□□ -1.97
SHFQ7M4L6 AL163153.1-201ENST00000554223 283 ntBASIC2.77□□□□□ -1.97
SHFQ7M4L6 AL121821.2-201ENST00000556081 394 ntBASIC2.77□□□□□ -1.97
SHFQ7M4L6 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC2.77□□□□□ -1.97
SHFQ7M4L6 AC006130.2-201ENST00000586202 326 ntBASIC2.77□□□□□ -1.97
SHFQ7M4L6 AL160281.1-201ENST00000605307 311 ntBASIC2.77□□□□□ -1.97
SHFQ7M4L6 MIR6733-201ENST00000635723 61 ntBASIC2.77□□□□□ -1.97
SHFQ7M4L6 U4.7-201ENST00000638126 106 ntBASIC2.77□□□□□ -1.97
SHFQ7M4L6 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
SHFQ7M4L6 AC073544.1-201ENST00000600110 1595 ntBASIC2.77□□□□□ -1.97
SHFQ7M4L6 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC2.76□□□□□ -1.97
SHFQ7M4L6 AC108206.1-201ENST00000570186 4159 ntBASIC2.76□□□□□ -1.97
SHFQ7M4L6 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC2.76□□□□□ -1.97
SHFQ7M4L6 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.76□□□□□ -1.97
SHFQ7M4L6 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
SHFQ7M4L6 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.76□□□□□ -1.97
SHFQ7M4L6 Y_RNA.535-201ENST00000384612 99 ntBASIC2.76□□□□□ -1.97
SHFQ7M4L6 SNORD67-201ENST00000390833 111 ntBASIC2.76□□□□□ -1.97
SHFQ7M4L6 PTMAP2-201ENST00000397627 327 ntBASIC2.76□□□□□ -1.97
SHFQ7M4L6 FTH1P15-201ENST00000406984 280 ntBASIC2.76□□□□□ -1.97
SHFQ7M4L6 RNU2-49P-201ENST00000410666 184 ntBASIC2.76□□□□□ -1.97
SHFQ7M4L6 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC2.76□□□□□ -1.97
SHFQ7M4L6 RPL39P40-201ENST00000445481 146 ntBASIC2.76□□□□□ -1.97
SHFQ7M4L6 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC2.76□□□□□ -1.97
SHFQ7M4L6 AC116655.1-201ENST00000508324 901 ntBASIC2.76□□□□□ -1.97
SHFQ7M4L6 MTCYBP40-201ENST00000509390 1135 ntBASIC2.76□□□□□ -1.97
SHFQ7M4L6 SNORD59.2-201ENST00000516873 68 ntBASIC2.76□□□□□ -1.97
SHFQ7M4L6 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC2.76□□□□□ -1.97
SHFQ7M4L6 AC109479.2-201ENST00000517842 174 ntBASIC2.76□□□□□ -1.97
SHFQ7M4L6 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC2.76□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 92.7 ms