Protein–RNA interactions for Protein: Q6ZNE9

RUFY4, RUN and FYVE domain-containing protein 4, humanhuman

Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY4Q6ZNE9 AC114482.1-201ENST00000418010 247 ntBASIC4.2□□□□□ -1.74
RUFY4Q6ZNE9 TMEM167AP1-201ENST00000423409 219 ntBASIC4.2□□□□□ -1.74
RUFY4Q6ZNE9 AC110768.1-201ENST00000509222 400 ntBASIC4.2□□□□□ -1.74
RUFY4Q6ZNE9 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC4.2□□□□□ -1.74
RUFY4Q6ZNE9 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC4.2□□□□□ -1.74
RUFY4Q6ZNE9 RNU2-58P-201ENST00000516403 183 ntBASIC4.2□□□□□ -1.74
RUFY4Q6ZNE9 RNU1-103P-201ENST00000516502 125 ntBASIC4.2□□□□□ -1.74
RUFY4Q6ZNE9 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
RUFY4Q6ZNE9 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC4.2□□□□□ -1.74
RUFY4Q6ZNE9 VN1R91P-201ENST00000594377 169 ntBASIC4.2□□□□□ -1.74
RUFY4Q6ZNE9 AC009318.2-201ENST00000610917 651 ntBASIC4.2□□□□□ -1.74
RUFY4Q6ZNE9 AL110115.1-201ENST00000614396 364 ntBASIC4.2□□□□□ -1.74
RUFY4Q6ZNE9 HMGB1P24-202ENST00000615653 685 ntBASIC4.2□□□□□ -1.74
RUFY4Q6ZNE9 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC4.2□□□□□ -1.74
RUFY4Q6ZNE9 IDE-202ENST00000371581 4480 ntTSL 2 BASIC4.2□□□□□ -1.74
RUFY4Q6ZNE9 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.2□□□□□ -1.74
RUFY4Q6ZNE9 CDC27P3-201ENST00000635418 1910 ntBASIC4.2□□□□□ -1.74
RUFY4Q6ZNE9 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC4.2□□□□□ -1.74
RUFY4Q6ZNE9 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
RUFY4Q6ZNE9 UBE3AP2-201ENST00000429033 2259 ntBASIC4.2□□□□□ -1.74
RUFY4Q6ZNE9 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC4.19□□□□□ -1.74
RUFY4Q6ZNE9 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
RUFY4Q6ZNE9 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
RUFY4Q6ZNE9 AC066616.2-201ENST00000559334 1481 ntBASIC4.19□□□□□ -1.74
RUFY4Q6ZNE9 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
RUFY4Q6ZNE9 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
RUFY4Q6ZNE9 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC4.19□□□□□ -1.74
RUFY4Q6ZNE9 AC073346.2-201ENST00000624724 2058 ntBASIC4.19□□□□□ -1.74
RUFY4Q6ZNE9 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC4.19□□□□□ -1.74
RUFY4Q6ZNE9 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
RUFY4Q6ZNE9 RNU1-73P-201ENST00000383971 164 ntBASIC4.19□□□□□ -1.74
RUFY4Q6ZNE9 Y_RNA.485-201ENST00000384395 102 ntBASIC4.19□□□□□ -1.74
RUFY4Q6ZNE9 RNU6-1109P-201ENST00000391187 107 ntBASIC4.19□□□□□ -1.74
RUFY4Q6ZNE9 SAR1AP2-201ENST00000392696 594 ntBASIC4.19□□□□□ -1.74
RUFY4Q6ZNE9 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC4.19□□□□□ -1.74
RUFY4Q6ZNE9 RPS29P4-201ENST00000414733 161 ntBASIC4.19□□□□□ -1.74
RUFY4Q6ZNE9 RPS6P12-201ENST00000432491 726 ntBASIC4.19□□□□□ -1.74
RUFY4Q6ZNE9 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC4.19□□□□□ -1.74
RUFY4Q6ZNE9 HMGB3P8-201ENST00000449709 577 ntBASIC4.19□□□□□ -1.74
RUFY4Q6ZNE9 RPS29P27-201ENST00000463711 170 ntBASIC4.19□□□□□ -1.74
RUFY4Q6ZNE9 SRP72-202ENST00000504757 745 ntTSL 2 BASIC4.19□□□□□ -1.74
RUFY4Q6ZNE9 RAC1P2-201ENST00000511164 579 ntBASIC4.19□□□□□ -1.74
RUFY4Q6ZNE9 RNU1-61P-201ENST00000516107 151 ntBASIC4.19□□□□□ -1.74
RUFY4Q6ZNE9 RNU6-635P-201ENST00000516651 102 ntBASIC4.19□□□□□ -1.74
RUFY4Q6ZNE9 SCARNA13-201ENST00000516672 275 ntBASIC4.19□□□□□ -1.74
RUFY4Q6ZNE9 RN7SKP289-201ENST00000517244 295 ntBASIC4.19□□□□□ -1.74
RUFY4Q6ZNE9 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC4.19□□□□□ -1.74
RUFY4Q6ZNE9 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC4.19□□□□□ -1.74
RUFY4Q6ZNE9 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC4.19□□□□□ -1.74
RUFY4Q6ZNE9 UBE2Q2P8-201ENST00000560644 102 ntBASIC4.19□□□□□ -1.74
RUFY4Q6ZNE9 MIR5188-201ENST00000583467 113 ntBASIC4.19□□□□□ -1.74
RUFY4Q6ZNE9 AC124312.5-201ENST00000604451 268 ntBASIC4.19□□□□□ -1.74
RUFY4Q6ZNE9 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC4.19□□□□□ -1.74
RUFY4Q6ZNE9 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC4.19□□□□□ -1.74
RUFY4Q6ZNE9 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC4.19□□□□□ -1.74
RUFY4Q6ZNE9 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC4.19□□□□□ -1.74
RUFY4Q6ZNE9 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
RUFY4Q6ZNE9 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
RUFY4Q6ZNE9 MFSD8-236ENST00000641509 4050 ntBASIC4.19□□□□□ -1.74
RUFY4Q6ZNE9 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4.19□□□□□ -1.74
RUFY4Q6ZNE9 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC4.18□□□□□ -1.74
RUFY4Q6ZNE9 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
RUFY4Q6ZNE9 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC4.18□□□□□ -1.74
RUFY4Q6ZNE9 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
RUFY4Q6ZNE9 RNU6-428P-201ENST00000362942 107 ntBASIC4.18□□□□□ -1.74
RUFY4Q6ZNE9 SNORD50.1-201ENST00000362987 71 ntBASIC4.18□□□□□ -1.74
RUFY4Q6ZNE9 RNU6-336P-201ENST00000364891 107 ntBASIC4.18□□□□□ -1.74
RUFY4Q6ZNE9 SNORA9-201ENST00000384215 133 ntBASIC4.18□□□□□ -1.74
RUFY4Q6ZNE9 Z98941.1-201ENST00000407764 100 ntBASIC4.18□□□□□ -1.74
RUFY4Q6ZNE9 MIR1183-201ENST00000408856 89 ntBASIC4.18□□□□□ -1.74
RUFY4Q6ZNE9 NDUFS5P4-201ENST00000412983 318 ntBASIC4.18□□□□□ -1.74
RUFY4Q6ZNE9 MTCO3P19-201ENST00000415864 321 ntBASIC4.18□□□□□ -1.74
RUFY4Q6ZNE9 TRAPPC2P8-201ENST00000440676 396 ntBASIC4.18□□□□□ -1.74
RUFY4Q6ZNE9 AC073910.1-201ENST00000445047 438 ntBASIC4.18□□□□□ -1.74
RUFY4Q6ZNE9 RN7SKP210-201ENST00000459176 261 ntBASIC4.18□□□□□ -1.74
RUFY4Q6ZNE9 RPS4XP13-201ENST00000483219 789 ntBASIC4.18□□□□□ -1.74
RUFY4Q6ZNE9 AC106707.2-201ENST00000484182 374 ntBASIC4.18□□□□□ -1.74
RUFY4Q6ZNE9 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC4.18□□□□□ -1.74
RUFY4Q6ZNE9 RNA5SP208-201ENST00000516156 78 ntBASIC4.18□□□□□ -1.74
RUFY4Q6ZNE9 AC009812.2-201ENST00000517657 457 ntBASIC4.18□□□□□ -1.74
RUFY4Q6ZNE9 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC4.18□□□□□ -1.74
RUFY4Q6ZNE9 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC4.18□□□□□ -1.74
RUFY4Q6ZNE9 AL121655.1-201ENST00000605811 308 ntBASIC4.18□□□□□ -1.74
RUFY4Q6ZNE9 AC100812.1-201ENST00000607622 580 ntBASIC4.18□□□□□ -1.74
RUFY4Q6ZNE9 AC004825.2-201ENST00000616634 455 ntBASIC4.18□□□□□ -1.74
RUFY4Q6ZNE9 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
RUFY4Q6ZNE9 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.18□□□□□ -1.74
RUFY4Q6ZNE9 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
RUFY4Q6ZNE9 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
RUFY4Q6ZNE9 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC4.18□□□□□ -1.74
RUFY4Q6ZNE9 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC4.17□□□□□ -1.74
RUFY4Q6ZNE9 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC4.17□□□□□ -1.74
RUFY4Q6ZNE9 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
RUFY4Q6ZNE9 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC4.17□□□□□ -1.74
RUFY4Q6ZNE9 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC4.17□□□□□ -1.74
RUFY4Q6ZNE9 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
RUFY4Q6ZNE9 Y_RNA.276-201ENST00000364732 109 ntBASIC4.17□□□□□ -1.74
RUFY4Q6ZNE9 SET-203ENST00000372688 801 ntTSL 2 BASIC4.17□□□□□ -1.74
RUFY4Q6ZNE9 Z98749.2-208ENST00000381646 500 ntBASIC4.17□□□□□ -1.74
RUFY4Q6ZNE9 MIR518D-201ENST00000385014 87 ntBASIC4.17□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 214.7 ms