Protein–RNA interactions for Protein: Q5W0Q7

USPL1, SUMO-specific isopeptidase USPL1, humanhuman

Predictions only

Length 1,092 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USPL1Q5W0Q7 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC4.69□□□□□ -1.66
USPL1Q5W0Q7 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
USPL1Q5W0Q7 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
USPL1Q5W0Q7 AC007785.2-201ENST00000598627 1916 ntBASIC4.68□□□□□ -1.66
USPL1Q5W0Q7 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
USPL1Q5W0Q7 Y_RNA.64-201ENST00000362845 102 ntBASIC4.68□□□□□ -1.66
USPL1Q5W0Q7 AL603908.1-201ENST00000406098 201 ntBASIC4.68□□□□□ -1.66
USPL1Q5W0Q7 RNA5SP494-201ENST00000410653 129 ntBASIC4.68□□□□□ -1.66
USPL1Q5W0Q7 Z82210.1-201ENST00000440037 231 ntBASIC4.68□□□□□ -1.66
USPL1Q5W0Q7 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC4.68□□□□□ -1.66
USPL1Q5W0Q7 AC026784.1-201ENST00000507986 352 ntBASIC4.68□□□□□ -1.66
USPL1Q5W0Q7 AP003733.2-201ENST00000529409 171 ntBASIC4.68□□□□□ -1.66
USPL1Q5W0Q7 AMZ2P1-203ENST00000565833 850 ntBASIC4.68□□□□□ -1.66
USPL1Q5W0Q7 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
USPL1Q5W0Q7 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
USPL1Q5W0Q7 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC4.68□□□□□ -1.66
USPL1Q5W0Q7 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
USPL1Q5W0Q7 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
USPL1Q5W0Q7 Z75746.1-201ENST00000440243 2080 ntBASIC4.68□□□□□ -1.66
USPL1Q5W0Q7 HSP90AA4P-202ENST00000506915 2228 ntBASIC4.68□□□□□ -1.66
USPL1Q5W0Q7 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
USPL1Q5W0Q7 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
USPL1Q5W0Q7 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
USPL1Q5W0Q7 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
USPL1Q5W0Q7 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.67□□□□□ -1.66
USPL1Q5W0Q7 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
USPL1Q5W0Q7 RNU1-33P-201ENST00000364249 162 ntBASIC4.67□□□□□ -1.66
USPL1Q5W0Q7 RNU6-1093P-201ENST00000391194 107 ntBASIC4.67□□□□□ -1.66
USPL1Q5W0Q7 RNA5SP120-201ENST00000410900 112 ntBASIC4.67□□□□□ -1.66
USPL1Q5W0Q7 MTND3P9-201ENST00000429526 346 ntBASIC4.67□□□□□ -1.66
USPL1Q5W0Q7 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC4.67□□□□□ -1.66
USPL1Q5W0Q7 RPEP5-201ENST00000441137 268 ntBASIC4.67□□□□□ -1.66
USPL1Q5W0Q7 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.67□□□□□ -1.66
USPL1Q5W0Q7 AC006026.2-201ENST00000457376 180 ntBASIC4.67□□□□□ -1.66
USPL1Q5W0Q7 RPL21P10-201ENST00000463521 490 ntBASIC4.67□□□□□ -1.66
USPL1Q5W0Q7 RPS29P27-201ENST00000463711 170 ntBASIC4.67□□□□□ -1.66
USPL1Q5W0Q7 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC4.67□□□□□ -1.66
USPL1Q5W0Q7 AC010186.2-204ENST00000537668 439 ntBASIC4.67□□□□□ -1.66
USPL1Q5W0Q7 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC4.67□□□□□ -1.66
USPL1Q5W0Q7 MIR3128-201ENST00000581957 66 ntBASIC4.67□□□□□ -1.66
USPL1Q5W0Q7 AL355877.2-201ENST00000603670 358 ntBASIC4.67□□□□□ -1.66
USPL1Q5W0Q7 AC096772.1-201ENST00000609146 564 ntBASIC4.67□□□□□ -1.66
USPL1Q5W0Q7 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC4.67□□□□□ -1.66
USPL1Q5W0Q7 AP000560.1-201ENST00000624150 1937 ntBASIC4.67□□□□□ -1.66
USPL1Q5W0Q7 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.67□□□□□ -1.66
USPL1Q5W0Q7 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.66□□□□□ -1.66
USPL1Q5W0Q7 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
USPL1Q5W0Q7 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
USPL1Q5W0Q7 U3.6-201ENST00000363622 211 ntBASIC4.66□□□□□ -1.66
USPL1Q5W0Q7 MIR128-1-201ENST00000384921 82 ntBASIC4.66□□□□□ -1.66
USPL1Q5W0Q7 MIR190B-201ENST00000401119 79 ntBASIC4.66□□□□□ -1.66
USPL1Q5W0Q7 RNU2-38P-201ENST00000410856 79 ntBASIC4.66□□□□□ -1.66
USPL1Q5W0Q7 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC4.66□□□□□ -1.66
USPL1Q5W0Q7 AC005300.1-201ENST00000428401 373 ntBASIC4.66□□□□□ -1.66
USPL1Q5W0Q7 AC005326.1-201ENST00000429197 123 ntBASIC4.66□□□□□ -1.66
USPL1Q5W0Q7 SNRPEP9-201ENST00000436794 238 ntBASIC4.66□□□□□ -1.66
USPL1Q5W0Q7 NDUFS5P3-201ENST00000450668 321 ntBASIC4.66□□□□□ -1.66
USPL1Q5W0Q7 AL645939.1-201ENST00000453429 797 ntBASIC4.66□□□□□ -1.66
USPL1Q5W0Q7 TRBVB-201ENST00000477100 408 ntBASIC4.66□□□□□ -1.66
USPL1Q5W0Q7 AC023141.12-201ENST00000512399 199 ntBASIC4.66□□□□□ -1.66
USPL1Q5W0Q7 RNU6-397P-201ENST00000516226 104 ntBASIC4.66□□□□□ -1.66
USPL1Q5W0Q7 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC4.66□□□□□ -1.66
USPL1Q5W0Q7 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.66□□□□□ -1.66
USPL1Q5W0Q7 AC136601.2-201ENST00000604356 474 ntBASIC4.66□□□□□ -1.66
USPL1Q5W0Q7 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
USPL1Q5W0Q7 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
USPL1Q5W0Q7 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
USPL1Q5W0Q7 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.66□□□□□ -1.66
USPL1Q5W0Q7 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
USPL1Q5W0Q7 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
USPL1Q5W0Q7 AL133383.2-201ENST00000622958 2336 ntBASIC4.65□□□□□ -1.66
USPL1Q5W0Q7 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC4.65□□□□□ -1.67
USPL1Q5W0Q7 RNU6-212P-201ENST00000362642 104 ntBASIC4.65□□□□□ -1.67
USPL1Q5W0Q7 SNORA12.2-201ENST00000391040 156 ntBASIC4.65□□□□□ -1.67
USPL1Q5W0Q7 MIR548I3-201ENST00000408378 149 ntBASIC4.65□□□□□ -1.67
USPL1Q5W0Q7 RNU6ATAC10P-201ENST00000408635 111 ntBASIC4.65□□□□□ -1.67
USPL1Q5W0Q7 MIR548I1-201ENST00000408810 149 ntBASIC4.65□□□□□ -1.67
USPL1Q5W0Q7 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC4.65□□□□□ -1.67
USPL1Q5W0Q7 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC4.65□□□□□ -1.67
USPL1Q5W0Q7 AL356535.1-201ENST00000440335 398 ntBASIC4.65□□□□□ -1.67
USPL1Q5W0Q7 LINC01399-202ENST00000458450 244 ntBASIC4.65□□□□□ -1.67
USPL1Q5W0Q7 AC139453.3-201ENST00000493276 369 ntBASIC4.65□□□□□ -1.67
USPL1Q5W0Q7 RNU7-175P-201ENST00000515915 61 ntBASIC4.65□□□□□ -1.67
USPL1Q5W0Q7 Y_RNA.680-201ENST00000516441 93 ntBASIC4.65□□□□□ -1.67
USPL1Q5W0Q7 AL442163.3-201ENST00000554110 156 ntBASIC4.65□□□□□ -1.67
USPL1Q5W0Q7 AC090877.1-201ENST00000561418 344 ntBASIC4.65□□□□□ -1.67
USPL1Q5W0Q7 AL109918.3-201ENST00000603072 338 ntBASIC4.65□□□□□ -1.67
USPL1Q5W0Q7 UBE2Q2P6-201ENST00000612666 153 ntBASIC4.65□□□□□ -1.67
USPL1Q5W0Q7 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.65□□□□□ -1.67
USPL1Q5W0Q7 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
USPL1Q5W0Q7 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
USPL1Q5W0Q7 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
USPL1Q5W0Q7 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
USPL1Q5W0Q7 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
USPL1Q5W0Q7 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC4.65□□□□□ -1.67
USPL1Q5W0Q7 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC4.64□□□□□ -1.67
USPL1Q5W0Q7 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC4.64□□□□□ -1.67
USPL1Q5W0Q7 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.64□□□□□ -1.67
USPL1Q5W0Q7 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
USPL1Q5W0Q7 AC087190.4-201ENST00000574616 8334 ntBASIC4.64□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 117.7 ms