Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 AC000123.3-201ENST00000624029 4975 ntBASIC4.4□□□□□ -1.71
RNFT1Q5M7Z0 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
RNFT1Q5M7Z0 Y_RNA.328-201ENST00000365208 113 ntBASIC4.4□□□□□ -1.71
RNFT1Q5M7Z0 RNU6-573P-201ENST00000383938 106 ntBASIC4.4□□□□□ -1.71
RNFT1Q5M7Z0 RNU6-144P-201ENST00000383951 107 ntBASIC4.4□□□□□ -1.71
RNFT1Q5M7Z0 MIR298-201ENST00000401212 88 ntBASIC4.4□□□□□ -1.71
RNFT1Q5M7Z0 RN7SKP61-201ENST00000410642 295 ntBASIC4.4□□□□□ -1.71
RNFT1Q5M7Z0 AC114755.2-201ENST00000413520 361 ntBASIC4.4□□□□□ -1.71
RNFT1Q5M7Z0 CYCSP49-201ENST00000420810 319 ntBASIC4.4□□□□□ -1.71
RNFT1Q5M7Z0 AL645608.4-201ENST00000423619 154 ntBASIC4.4□□□□□ -1.71
RNFT1Q5M7Z0 AC007215.1-201ENST00000464893 276 ntBASIC4.4□□□□□ -1.71
RNFT1Q5M7Z0 UQCRHP4-201ENST00000471686 272 ntBASIC4.4□□□□□ -1.71
RNFT1Q5M7Z0 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.4□□□□□ -1.71
RNFT1Q5M7Z0 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC4.4□□□□□ -1.71
RNFT1Q5M7Z0 RN7SKP12-201ENST00000516275 143 ntBASIC4.4□□□□□ -1.71
RNFT1Q5M7Z0 HSPE1P4-201ENST00000550617 308 ntBASIC4.4□□□□□ -1.71
RNFT1Q5M7Z0 MIR378D2-201ENST00000580636 98 ntBASIC4.4□□□□□ -1.71
RNFT1Q5M7Z0 MIR4472-2-201ENST00000582069 67 ntBASIC4.4□□□□□ -1.71
RNFT1Q5M7Z0 FAM27B-201ENST00000610601 213 ntBASIC4.4□□□□□ -1.71
RNFT1Q5M7Z0 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.4□□□□□ -1.71
RNFT1Q5M7Z0 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC4.4□□□□□ -1.71
RNFT1Q5M7Z0 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
RNFT1Q5M7Z0 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC4.4□□□□□ -1.71
RNFT1Q5M7Z0 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
RNFT1Q5M7Z0 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.71
RNFT1Q5M7Z0 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
RNFT1Q5M7Z0 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
RNFT1Q5M7Z0 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
RNFT1Q5M7Z0 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC4.39□□□□□ -1.71
RNFT1Q5M7Z0 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC4.39□□□□□ -1.71
RNFT1Q5M7Z0 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
RNFT1Q5M7Z0 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
RNFT1Q5M7Z0 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.39□□□□□ -1.71
RNFT1Q5M7Z0 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
RNFT1Q5M7Z0 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.39□□□□□ -1.71
RNFT1Q5M7Z0 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
RNFT1Q5M7Z0 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
RNFT1Q5M7Z0 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
RNFT1Q5M7Z0 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC4.39□□□□□ -1.71
RNFT1Q5M7Z0 MIR367-201ENST00000362299 68 ntBASIC4.39□□□□□ -1.71
RNFT1Q5M7Z0 RNU1-62P-201ENST00000362599 164 ntBASIC4.39□□□□□ -1.71
RNFT1Q5M7Z0 SNORA73.1-201ENST00000363107 205 ntBASIC4.39□□□□□ -1.71
RNFT1Q5M7Z0 RNU6-1285P-201ENST00000363480 105 ntBASIC4.39□□□□□ -1.71
RNFT1Q5M7Z0 RNU6-1264P-201ENST00000383891 107 ntBASIC4.39□□□□□ -1.71
RNFT1Q5M7Z0 Y_RNA.456-201ENST00000384232 111 ntBASIC4.39□□□□□ -1.71
RNFT1Q5M7Z0 RNU6-820P-201ENST00000384273 107 ntBASIC4.39□□□□□ -1.71
RNFT1Q5M7Z0 AC068287.1-201ENST00000430283 295 ntBASIC4.39□□□□□ -1.71
RNFT1Q5M7Z0 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC4.39□□□□□ -1.71
RNFT1Q5M7Z0 AC004386.2-201ENST00000441858 148 ntBASIC4.39□□□□□ -1.71
RNFT1Q5M7Z0 HMGN2P32-201ENST00000444648 269 ntBASIC4.39□□□□□ -1.71
RNFT1Q5M7Z0 AP000705.1-201ENST00000454567 350 ntBASIC4.39□□□□□ -1.71
RNFT1Q5M7Z0 snoU13.6-201ENST00000458785 104 ntBASIC4.39□□□□□ -1.71
RNFT1Q5M7Z0 RN7SL481P-201ENST00000477764 299 ntBASIC4.39□□□□□ -1.71
RNFT1Q5M7Z0 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC4.39□□□□□ -1.71
RNFT1Q5M7Z0 ENPP7P11-201ENST00000505915 627 ntBASIC4.39□□□□□ -1.71
RNFT1Q5M7Z0 SNORA40.13-201ENST00000516379 120 ntBASIC4.39□□□□□ -1.71
RNFT1Q5M7Z0 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.39□□□□□ -1.71
RNFT1Q5M7Z0 AC021231.3-201ENST00000558497 370 ntBASIC4.39□□□□□ -1.71
RNFT1Q5M7Z0 RN7SL690P-201ENST00000582087 240 ntBASIC4.39□□□□□ -1.71
RNFT1Q5M7Z0 AC022726.1-201ENST00000587475 207 ntBASIC4.39□□□□□ -1.71
RNFT1Q5M7Z0 AL356575.1-201ENST00000603008 283 ntBASIC4.39□□□□□ -1.71
RNFT1Q5M7Z0 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC4.39□□□□□ -1.71
RNFT1Q5M7Z0 U73479.1-201ENST00000618062 168 ntBASIC4.39□□□□□ -1.71
RNFT1Q5M7Z0 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
RNFT1Q5M7Z0 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC4.39□□□□□ -1.71
RNFT1Q5M7Z0 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
RNFT1Q5M7Z0 AC022336.2-201ENST00000568966 2538 ntBASIC4.39□□□□□ -1.71
RNFT1Q5M7Z0 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.39□□□□□ -1.71
RNFT1Q5M7Z0 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
RNFT1Q5M7Z0 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
RNFT1Q5M7Z0 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC4.38□□□□□ -1.71
RNFT1Q5M7Z0 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.38□□□□□ -1.71
RNFT1Q5M7Z0 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
RNFT1Q5M7Z0 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
RNFT1Q5M7Z0 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
RNFT1Q5M7Z0 RNU6-942P-201ENST00000363002 107 ntBASIC4.38□□□□□ -1.71
RNFT1Q5M7Z0 Y_RNA.219-201ENST00000364232 113 ntBASIC4.38□□□□□ -1.71
RNFT1Q5M7Z0 RNU6-454P-201ENST00000364292 107 ntBASIC4.38□□□□□ -1.71
RNFT1Q5M7Z0 RNU6-1141P-201ENST00000364520 107 ntBASIC4.38□□□□□ -1.71
RNFT1Q5M7Z0 RNU6-756P-201ENST00000383997 107 ntBASIC4.38□□□□□ -1.71
RNFT1Q5M7Z0 SNORA36A-201ENST00000384221 132 ntBASIC4.38□□□□□ -1.71
RNFT1Q5M7Z0 SNORD78.1-201ENST00000390866 65 ntBASIC4.38□□□□□ -1.71
RNFT1Q5M7Z0 AL603914.1-201ENST00000401964 204 ntBASIC4.38□□□□□ -1.71
RNFT1Q5M7Z0 AL031003.1-201ENST00000404229 172 ntBASIC4.38□□□□□ -1.71
RNFT1Q5M7Z0 RNU2-68P-201ENST00000410878 191 ntBASIC4.38□□□□□ -1.71
RNFT1Q5M7Z0 RPS20P14-201ENST00000412545 360 ntBASIC4.38□□□□□ -1.71
RNFT1Q5M7Z0 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC4.38□□□□□ -1.71
RNFT1Q5M7Z0 RNU7-141P-201ENST00000459304 62 ntBASIC4.38□□□□□ -1.71
RNFT1Q5M7Z0 AL591473.1-201ENST00000464297 313 ntBASIC4.38□□□□□ -1.71
RNFT1Q5M7Z0 RPS23P7-201ENST00000466210 444 ntBASIC4.38□□□□□ -1.71
RNFT1Q5M7Z0 AC011276.1-201ENST00000469688 323 ntBASIC4.38□□□□□ -1.71
RNFT1Q5M7Z0 RNU5F-2P-201ENST00000516066 82 ntBASIC4.38□□□□□ -1.71
RNFT1Q5M7Z0 RNU6-781P-201ENST00000516377 101 ntBASIC4.38□□□□□ -1.71
RNFT1Q5M7Z0 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC4.38□□□□□ -1.71
RNFT1Q5M7Z0 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC4.38□□□□□ -1.71
RNFT1Q5M7Z0 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC4.38□□□□□ -1.71
RNFT1Q5M7Z0 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC4.38□□□□□ -1.71
RNFT1Q5M7Z0 IPO5P1-202ENST00000600039 287 ntBASIC4.38□□□□□ -1.71
RNFT1Q5M7Z0 AC025166.1-201ENST00000612411 163 ntBASIC4.38□□□□□ -1.71
RNFT1Q5M7Z0 CCT7-217ENST00000626868 249 ntTSL 5 BASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 108.6 ms