Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 SNORA25.11-201ENST00000515935 105 ntBASIC1.86□□□□□ -2.11
HMGCS1Q01581 ACA59.2-201ENST00000517061 156 ntBASIC1.86□□□□□ -2.11
HMGCS1Q01581 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC1.86□□□□□ -2.11
HMGCS1Q01581 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC1.86□□□□□ -2.11
HMGCS1Q01581 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC1.86□□□□□ -2.11
HMGCS1Q01581 AC087883.1-201ENST00000551882 391 ntBASIC1.86□□□□□ -2.11
HMGCS1Q01581 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC1.86□□□□□ -2.11
HMGCS1Q01581 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC1.86□□□□□ -2.11
HMGCS1Q01581 MIR4765-201ENST00000585007 77 ntBASIC1.86□□□□□ -2.11
HMGCS1Q01581 AC008521.1-201ENST00000587471 187 ntBASIC1.86□□□□□ -2.11
HMGCS1Q01581 AL022154.1-201ENST00000604698 785 ntBASIC1.86□□□□□ -2.11
HMGCS1Q01581 AC121247.2-201ENST00000604776 136 ntBASIC1.86□□□□□ -2.11
HMGCS1Q01581 AC064872.1-201ENST00000604823 1072 ntBASIC1.86□□□□□ -2.11
HMGCS1Q01581 AC073114.1-201ENST00000612027 490 ntBASIC1.86□□□□□ -2.11
HMGCS1Q01581 AC078883.4-201ENST00000623218 367 ntBASIC1.86□□□□□ -2.11
HMGCS1Q01581 AC093648.1-201ENST00000623546 606 ntBASIC1.86□□□□□ -2.11
HMGCS1Q01581 AL157786.1-207ENST00000627771 695 ntBASIC1.86□□□□□ -2.11
HMGCS1Q01581 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC1.86□□□□□ -2.11
HMGCS1Q01581 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.86□□□□□ -2.11
HMGCS1Q01581 IL33-202ENST00000417746 2327 ntTSL 2 BASIC1.85□□□□□ -2.11
HMGCS1Q01581 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
HMGCS1Q01581 RNU6-395P-201ENST00000365662 106 ntBASIC1.85□□□□□ -2.11
HMGCS1Q01581 RNU1-148P-201ENST00000384472 162 ntBASIC1.85□□□□□ -2.11
HMGCS1Q01581 MIR578-201ENST00000384828 96 ntBASIC1.85□□□□□ -2.11
HMGCS1Q01581 U6atac.2-201ENST00000408644 118 ntBASIC1.85□□□□□ -2.11
HMGCS1Q01581 RNU4-26P-201ENST00000410270 107 ntBASIC1.85□□□□□ -2.11
HMGCS1Q01581 RNA5SP270-201ENST00000411361 118 ntBASIC1.85□□□□□ -2.11
HMGCS1Q01581 EIF1AXP1-201ENST00000419267 435 ntBASIC1.85□□□□□ -2.11
HMGCS1Q01581 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC1.85□□□□□ -2.11
HMGCS1Q01581 HMGN2P38-201ENST00000423806 265 ntBASIC1.85□□□□□ -2.11
HMGCS1Q01581 RPS3AP44-201ENST00000425466 790 ntBASIC1.85□□□□□ -2.11
HMGCS1Q01581 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC1.85□□□□□ -2.11
HMGCS1Q01581 SRIP2-201ENST00000428470 166 ntBASIC1.85□□□□□ -2.11
HMGCS1Q01581 CETN4P-201ENST00000432407 469 ntBASIC1.85□□□□□ -2.11
HMGCS1Q01581 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC1.85□□□□□ -2.11
HMGCS1Q01581 AL353706.1-201ENST00000436728 494 ntBASIC1.85□□□□□ -2.11
HMGCS1Q01581 FABP5P14-201ENST00000437273 393 ntBASIC1.85□□□□□ -2.11
HMGCS1Q01581 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC1.85□□□□□ -2.11
HMGCS1Q01581 AC079804.2-201ENST00000490376 200 ntBASIC1.85□□□□□ -2.11
HMGCS1Q01581 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC1.85□□□□□ -2.11
HMGCS1Q01581 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
HMGCS1Q01581 AC091965.2-201ENST00000512324 613 ntBASIC1.85□□□□□ -2.11
HMGCS1Q01581 AC112206.3-201ENST00000514578 389 ntBASIC1.85□□□□□ -2.11
HMGCS1Q01581 SNORA18.6-201ENST00000516792 115 ntBASIC1.85□□□□□ -2.11
HMGCS1Q01581 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC1.85□□□□□ -2.11
HMGCS1Q01581 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC1.85□□□□□ -2.11
HMGCS1Q01581 AC008749.1-201ENST00000597650 306 ntBASIC1.85□□□□□ -2.11
HMGCS1Q01581 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC1.85□□□□□ -2.11
HMGCS1Q01581 AC025165.5-201ENST00000602802 578 ntBASIC1.85□□□□□ -2.11
HMGCS1Q01581 Z99497.2-201ENST00000603634 310 ntBASIC1.85□□□□□ -2.11
HMGCS1Q01581 AL139286.2-201ENST00000606838 396 ntBASIC1.85□□□□□ -2.11
HMGCS1Q01581 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC1.85□□□□□ -2.11
HMGCS1Q01581 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
HMGCS1Q01581 USP12-203ENST00000620323 349 ntTSL 3 BASIC1.85□□□□□ -2.11
HMGCS1Q01581 DUXAP9-208ENST00000622815 614 ntBASIC1.85□□□□□ -2.11
HMGCS1Q01581 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
HMGCS1Q01581 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC1.85□□□□□ -2.11
HMGCS1Q01581 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC1.85□□□□□ -2.11
HMGCS1Q01581 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
HMGCS1Q01581 CENPCP1-201ENST00000533085 2578 ntBASIC1.85□□□□□ -2.11
HMGCS1Q01581 FARSBP1-201ENST00000435808 1778 ntBASIC1.85□□□□□ -2.11
HMGCS1Q01581 DLEU2_6.3-201ENST00000340052 136 ntBASIC1.84□□□□□ -2.11
HMGCS1Q01581 CIR1P3-201ENST00000405137 479 ntBASIC1.84□□□□□ -2.11
HMGCS1Q01581 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.84□□□□□ -2.11
HMGCS1Q01581 RN7SKP158-201ENST00000410453 326 ntBASIC1.84□□□□□ -2.11
HMGCS1Q01581 RN7SKP142-201ENST00000411236 328 ntBASIC1.84□□□□□ -2.11
HMGCS1Q01581 RNA5SP111-201ENST00000411386 101 ntBASIC1.84□□□□□ -2.11
HMGCS1Q01581 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC1.84□□□□□ -2.11
HMGCS1Q01581 MTND3P17-201ENST00000416968 344 ntBASIC1.84□□□□□ -2.11
HMGCS1Q01581 AC009518.2-201ENST00000418056 731 ntBASIC1.84□□□□□ -2.11
HMGCS1Q01581 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC1.84□□□□□ -2.11
HMGCS1Q01581 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC1.84□□□□□ -2.11
HMGCS1Q01581 AC016691.1-201ENST00000441321 413 ntBASIC1.84□□□□□ -2.11
HMGCS1Q01581 AL136380.1-201ENST00000447970 162 ntBASIC1.84□□□□□ -2.11
HMGCS1Q01581 AL513124.1-201ENST00000450410 614 ntBASIC1.84□□□□□ -2.11
HMGCS1Q01581 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
HMGCS1Q01581 snoU109.2-201ENST00000459316 135 ntBASIC1.84□□□□□ -2.11
HMGCS1Q01581 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC1.84□□□□□ -2.11
HMGCS1Q01581 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC1.84□□□□□ -2.11
HMGCS1Q01581 AC116562.3-201ENST00000506136 177 ntBASIC1.84□□□□□ -2.11
HMGCS1Q01581 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC1.84□□□□□ -2.11
HMGCS1Q01581 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC1.84□□□□□ -2.11
HMGCS1Q01581 AC068587.5-201ENST00000528506 175 ntBASIC1.84□□□□□ -2.11
HMGCS1Q01581 CBX3P7-201ENST00000532876 502 ntBASIC1.84□□□□□ -2.11
HMGCS1Q01581 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC1.84□□□□□ -2.11
HMGCS1Q01581 AC092325.1-201ENST00000566449 554 ntBASIC1.84□□□□□ -2.11
HMGCS1Q01581 MIR3913-1-201ENST00000577744 102 ntBASIC1.84□□□□□ -2.11
HMGCS1Q01581 AC008088.1-201ENST00000580993 280 ntBASIC1.84□□□□□ -2.11
HMGCS1Q01581 MIR3682-201ENST00000581338 84 ntBASIC1.84□□□□□ -2.11
HMGCS1Q01581 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.84□□□□□ -2.11
HMGCS1Q01581 APOOP1-201ENST00000604695 592 ntBASIC1.84□□□□□ -2.11
HMGCS1Q01581 AL670379.4-201ENST00000605279 254 ntBASIC1.84□□□□□ -2.11
HMGCS1Q01581 MIR98-201ENST00000606724 119 ntBASIC1.84□□□□□ -2.11
HMGCS1Q01581 uc_338.14-201ENST00000613162 166 ntBASIC1.84□□□□□ -2.11
HMGCS1Q01581 DLEU2_6.2-201ENST00000620994 136 ntBASIC1.84□□□□□ -2.11
HMGCS1Q01581 AC022079.1-201ENST00000621546 602 ntBASIC1.84□□□□□ -2.11
HMGCS1Q01581 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.84□□□□□ -2.11
HMGCS1Q01581 AL359740.1-201ENST00000624340 592 ntBASIC1.84□□□□□ -2.11
HMGCS1Q01581 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.84□□□□□ -2.12
HMGCS1Q01581 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.83□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms