Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 AC008993.2-201ENST00000631744 806 ntBASIC0.95□□□□□ -2.26
CCL20P78556 AC002543.1-201ENST00000299783 1954 ntBASIC0.95□□□□□ -2.26
CCL20P78556 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC0.95□□□□□ -2.26
CCL20P78556 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC0.94□□□□□ -2.26
CCL20P78556 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC0.94□□□□□ -2.26
CCL20P78556 SNORD114-1-201ENST00000362705 72 ntBASIC0.94□□□□□ -2.26
CCL20P78556 RNU6-413P-201ENST00000384115 107 ntBASIC0.94□□□□□ -2.26
CCL20P78556 MIR1267-201ENST00000408723 78 ntBASIC0.94□□□□□ -2.26
CCL20P78556 RNU4-26P-201ENST00000410270 107 ntBASIC0.94□□□□□ -2.26
CCL20P78556 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC0.94□□□□□ -2.26
CCL20P78556 AC092809.3-201ENST00000415453 231 ntBASIC0.94□□□□□ -2.26
CCL20P78556 AL135790.2-201ENST00000437701 267 ntBASIC0.94□□□□□ -2.26
CCL20P78556 TRAPPC2P8-201ENST00000440676 396 ntBASIC0.94□□□□□ -2.26
CCL20P78556 TRAPPC2P3-201ENST00000443200 321 ntBASIC0.94□□□□□ -2.26
CCL20P78556 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC0.94□□□□□ -2.26
CCL20P78556 RPS29P28-201ENST00000446439 141 ntBASIC0.94□□□□□ -2.26
CCL20P78556 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
CCL20P78556 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC0.94□□□□□ -2.26
CCL20P78556 AL049873.1-201ENST00000480540 376 ntBASIC0.94□□□□□ -2.26
CCL20P78556 RPL30P1-201ENST00000488676 339 ntBASIC0.94□□□□□ -2.26
CCL20P78556 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC0.94□□□□□ -2.26
CCL20P78556 RNU6-902P-201ENST00000517212 91 ntBASIC0.94□□□□□ -2.26
CCL20P78556 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC0.94□□□□□ -2.26
CCL20P78556 AL356057.1-201ENST00000533798 831 ntBASIC0.94□□□□□ -2.26
CCL20P78556 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC0.94□□□□□ -2.26
CCL20P78556 SUB1P4-201ENST00000566062 339 ntBASIC0.94□□□□□ -2.26
CCL20P78556 MIR3169-201ENST00000578032 83 ntBASIC0.94□□□□□ -2.26
CCL20P78556 AP000860.1-201ENST00000605250 559 ntBASIC0.94□□□□□ -2.26
CCL20P78556 AL355472.4-201ENST00000610233 626 ntBASIC0.94□□□□□ -2.26
CCL20P78556 AL590240.4-201ENST00000616908 390 ntBASIC0.94□□□□□ -2.26
CCL20P78556 DLEU1_2.1-201ENST00000617920 342 ntBASIC0.94□□□□□ -2.26
CCL20P78556 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC0.94□□□□□ -2.26
CCL20P78556 AP003476.1-201ENST00000623984 516 ntBASIC0.94□□□□□ -2.26
CCL20P78556 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC0.94□□□□□ -2.26
CCL20P78556 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC0.94□□□□□ -2.26
CCL20P78556 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC0.94□□□□□ -2.26
CCL20P78556 AC233981.2-201ENST00000611524 1614 ntBASIC0.93□□□□□ -2.26
CCL20P78556 NF1-214ENST00000490416 1329 ntTSL 3 BASIC0.93□□□□□ -2.26
CCL20P78556 AC092104.1-201ENST00000497346 1441 ntBASIC0.93□□□□□ -2.26
CCL20P78556 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC0.93□□□□□ -2.26
CCL20P78556 RNU6-414P-201ENST00000363705 104 ntBASIC0.93□□□□□ -2.26
CCL20P78556 RNU6-72P-201ENST00000384285 79 ntBASIC0.93□□□□□ -2.26
CCL20P78556 SNORD116-20-201ENST00000384529 92 ntBASIC0.93□□□□□ -2.26
CCL20P78556 Y_RNA.597-201ENST00000410463 100 ntBASIC0.93□□□□□ -2.26
CCL20P78556 Y_RNA.623-201ENST00000411128 95 ntBASIC0.93□□□□□ -2.26
CCL20P78556 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC0.93□□□□□ -2.26
CCL20P78556 ELOCP17-201ENST00000414751 326 ntBASIC0.93□□□□□ -2.26
CCL20P78556 OR6C66P-201ENST00000414917 930 ntBASIC0.93□□□□□ -2.26
CCL20P78556 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC0.93□□□□□ -2.26
CCL20P78556 ELOCP9-201ENST00000418624 239 ntBASIC0.93□□□□□ -2.26
CCL20P78556 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC0.93□□□□□ -2.26
CCL20P78556 AL591704.2-201ENST00000421658 181 ntBASIC0.93□□□□□ -2.26
CCL20P78556 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC0.93□□□□□ -2.26
CCL20P78556 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC0.93□□□□□ -2.26
CCL20P78556 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC0.93□□□□□ -2.26
CCL20P78556 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC0.93□□□□□ -2.26
CCL20P78556 SNORD97-201ENST00000459187 142 ntBASIC0.93□□□□□ -2.26
CCL20P78556 AC087477.1-201ENST00000465747 340 ntBASIC0.93□□□□□ -2.26
CCL20P78556 RPS26P55-201ENST00000471178 356 ntBASIC0.93□□□□□ -2.26
CCL20P78556 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC0.93□□□□□ -2.26
CCL20P78556 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC0.93□□□□□ -2.26
CCL20P78556 AC069306.1-201ENST00000507006 843 ntBASIC0.93□□□□□ -2.26
CCL20P78556 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC0.93□□□□□ -2.26
CCL20P78556 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC0.93□□□□□ -2.26
CCL20P78556 RPL21P5-201ENST00000554662 472 ntBASIC0.93□□□□□ -2.26
CCL20P78556 YWHAZP1-201ENST00000556286 722 ntBASIC0.93□□□□□ -2.26
CCL20P78556 AC019288.1-201ENST00000557918 224 ntBASIC0.93□□□□□ -2.26
CCL20P78556 VN1R82P-201ENST00000601481 356 ntBASIC0.93□□□□□ -2.26
CCL20P78556 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC0.93□□□□□ -2.26
CCL20P78556 AL021368.1-201ENST00000607490 540 ntBASIC0.93□□□□□ -2.26
CCL20P78556 AC063943.3-201ENST00000615562 356 ntBASIC0.93□□□□□ -2.26
CCL20P78556 AL121890.5-201ENST00000620848 304 ntBASIC0.93□□□□□ -2.26
CCL20P78556 MIR8063-201ENST00000621930 81 ntBASIC0.93□□□□□ -2.26
CCL20P78556 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC0.93□□□□□ -2.26
CCL20P78556 AC010149.2-201ENST00000637608 315 ntBASIC0.93□□□□□ -2.26
CCL20P78556 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC0.93□□□□□ -2.26
CCL20P78556 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC0.93□□□□□ -2.26
CCL20P78556 Y_RNA.110-201ENST00000363220 99 ntBASIC0.92□□□□□ -2.26
CCL20P78556 SNORD14B-201ENST00000364533 90 ntBASIC0.92□□□□□ -2.26
CCL20P78556 RNU6-190P-201ENST00000384154 102 ntBASIC0.92□□□□□ -2.26
CCL20P78556 Y_RNA.472-201ENST00000384322 102 ntBASIC0.92□□□□□ -2.26
CCL20P78556 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC0.92□□□□□ -2.26
CCL20P78556 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC0.92□□□□□ -2.26
CCL20P78556 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC0.92□□□□□ -2.26
CCL20P78556 RPS15AP10-201ENST00000432472 382 ntBASIC0.92□□□□□ -2.26
CCL20P78556 CALM1P1-201ENST00000442082 433 ntBASIC0.92□□□□□ -2.26
CCL20P78556 AC007327.1-201ENST00000447461 264 ntBASIC0.92□□□□□ -2.26
CCL20P78556 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC0.92□□□□□ -2.26
CCL20P78556 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC0.92□□□□□ -2.26
CCL20P78556 UBL5P3-201ENST00000475112 231 ntBASIC0.92□□□□□ -2.26
CCL20P78556 YWHAEP4-201ENST00000505390 198 ntBASIC0.92□□□□□ -2.26
CCL20P78556 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC0.92□□□□□ -2.26
CCL20P78556 TRAV32-201ENST00000553993 340 ntBASIC0.92□□□□□ -2.26
CCL20P78556 AC005668.1-201ENST00000571142 476 ntBASIC0.92□□□□□ -2.26
CCL20P78556 AC137800.2-201ENST00000574375 120 ntBASIC0.92□□□□□ -2.26
CCL20P78556 MIR4435-1-201ENST00000582552 80 ntBASIC0.92□□□□□ -2.26
CCL20P78556 MIR15A-201ENST00000607334 83 ntBASIC0.92□□□□□ -2.26
CCL20P78556 AC084824.5-201ENST00000612009 413 ntBASIC0.92□□□□□ -2.26
CCL20P78556 RNU6-1192P-201ENST00000612197 107 ntBASIC0.92□□□□□ -2.26
CCL20P78556 RNU6-489P-201ENST00000618289 107 ntBASIC0.92□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 112.9 ms