Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 RNU6-876P-201ENST00000391295 104 ntBASIC2.48□□□□□ -2.01
CX3CL1P78423 MIR450B-201ENST00000401182 78 ntBASIC2.48□□□□□ -2.01
CX3CL1P78423 AL133475.1-201ENST00000404414 305 ntBASIC2.48□□□□□ -2.01
CX3CL1P78423 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.48□□□□□ -2.01
CX3CL1P78423 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC2.48□□□□□ -2.01
CX3CL1P78423 MTCO3P18-201ENST00000440206 761 ntBASIC2.48□□□□□ -2.01
CX3CL1P78423 AL441985.1-201ENST00000457727 251 ntBASIC2.48□□□□□ -2.01
CX3CL1P78423 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC2.48□□□□□ -2.01
CX3CL1P78423 SLC25A15P5-201ENST00000508033 253 ntBASIC2.48□□□□□ -2.01
CX3CL1P78423 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.48□□□□□ -2.01
CX3CL1P78423 AC107953.1-201ENST00000522216 297 ntBASIC2.48□□□□□ -2.01
CX3CL1P78423 COPS8P3-201ENST00000526024 482 ntBASIC2.48□□□□□ -2.01
CX3CL1P78423 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC2.48□□□□□ -2.01
CX3CL1P78423 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.48□□□□□ -2.01
CX3CL1P78423 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC2.48□□□□□ -2.01
CX3CL1P78423 AC009033.1-201ENST00000624279 431 ntBASIC2.48□□□□□ -2.01
CX3CL1P78423 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC2.47□□□□□ -2.01
CX3CL1P78423 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.47□□□□□ -2.01
CX3CL1P78423 AC108206.1-201ENST00000570186 4159 ntBASIC2.47□□□□□ -2.01
CX3CL1P78423 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
CX3CL1P78423 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
CX3CL1P78423 RNU6-428P-201ENST00000362942 107 ntBASIC2.47□□□□□ -2.01
CX3CL1P78423 RNU6-105P-201ENST00000363909 104 ntBASIC2.47□□□□□ -2.01
CX3CL1P78423 SNORA38.1-201ENST00000364172 131 ntBASIC2.47□□□□□ -2.01
CX3CL1P78423 SNORA32.2-201ENST00000384049 122 ntBASIC2.47□□□□□ -2.01
CX3CL1P78423 RNU6-843P-201ENST00000384454 104 ntBASIC2.47□□□□□ -2.01
CX3CL1P78423 MT-TL1-201ENST00000386347 75 ntBASIC2.47□□□□□ -2.01
CX3CL1P78423 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC2.47□□□□□ -2.01
CX3CL1P78423 AL359672.1-201ENST00000442302 409 ntBASIC2.47□□□□□ -2.01
CX3CL1P78423 AC013470.1-201ENST00000453438 462 ntBASIC2.47□□□□□ -2.01
CX3CL1P78423 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC2.47□□□□□ -2.01
CX3CL1P78423 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC2.47□□□□□ -2.01
CX3CL1P78423 RPL7P43-201ENST00000478876 753 ntBASIC2.47□□□□□ -2.01
CX3CL1P78423 AP001025.1-201ENST00000486139 332 ntBASIC2.47□□□□□ -2.01
CX3CL1P78423 RPL23AP49-201ENST00000492925 468 ntBASIC2.47□□□□□ -2.01
CX3CL1P78423 RN7SL504P-201ENST00000494496 287 ntBASIC2.47□□□□□ -2.01
CX3CL1P78423 TRBVA-201ENST00000498804 316 ntBASIC2.47□□□□□ -2.01
CX3CL1P78423 AC008628.2-201ENST00000502605 298 ntBASIC2.47□□□□□ -2.01
CX3CL1P78423 AC116353.2-201ENST00000505332 712 ntBASIC2.47□□□□□ -2.01
CX3CL1P78423 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC2.47□□□□□ -2.01
CX3CL1P78423 RNU6-377P-201ENST00000515965 102 ntBASIC2.47□□□□□ -2.01
CX3CL1P78423 RNU6-1332P-201ENST00000516666 104 ntBASIC2.47□□□□□ -2.01
CX3CL1P78423 SNORA31.23-201ENST00000517219 133 ntBASIC2.47□□□□□ -2.01
CX3CL1P78423 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.47□□□□□ -2.01
CX3CL1P78423 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC2.47□□□□□ -2.01
CX3CL1P78423 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC2.47□□□□□ -2.01
CX3CL1P78423 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.47□□□□□ -2.01
CX3CL1P78423 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.47□□□□□ -2.01
CX3CL1P78423 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC2.47□□□□□ -2.01
CX3CL1P78423 AC021646.1-201ENST00000605469 484 ntBASIC2.47□□□□□ -2.01
CX3CL1P78423 AL121917.1-203ENST00000605534 577 ntBASIC2.47□□□□□ -2.01
CX3CL1P78423 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.47□□□□□ -2.01
CX3CL1P78423 AC069234.5-201ENST00000611056 416 ntBASIC2.47□□□□□ -2.01
CX3CL1P78423 uc_338.14-201ENST00000613162 166 ntBASIC2.47□□□□□ -2.01
CX3CL1P78423 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC2.47□□□□□ -2.01
CX3CL1P78423 AC009248.2-201ENST00000619826 254 ntBASIC2.47□□□□□ -2.01
CX3CL1P78423 DUXAP9-208ENST00000622815 614 ntBASIC2.47□□□□□ -2.01
CX3CL1P78423 AC097372.5-201ENST00000623665 376 ntBASIC2.47□□□□□ -2.01
CX3CL1P78423 MIR7515-201ENST00000637837 67 ntBASIC2.47□□□□□ -2.01
CX3CL1P78423 MIR622-201ENST00000638396 96 ntBASIC2.47□□□□□ -2.01
CX3CL1P78423 AC099654.14-201ENST00000638599 341 ntBASIC2.47□□□□□ -2.01
CX3CL1P78423 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
CX3CL1P78423 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
CX3CL1P78423 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
CX3CL1P78423 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
CX3CL1P78423 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
CX3CL1P78423 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
CX3CL1P78423 HAUS6P2-201ENST00000433254 2404 ntBASIC2.46□□□□□ -2.02
CX3CL1P78423 Y_RNA.72-201ENST00000362894 103 ntBASIC2.46□□□□□ -2.02
CX3CL1P78423 Y_RNA.160-201ENST00000363677 92 ntBASIC2.46□□□□□ -2.02
CX3CL1P78423 RNU6-336P-201ENST00000364891 107 ntBASIC2.46□□□□□ -2.02
CX3CL1P78423 RNA5-8SP4-201ENST00000365096 150 ntBASIC2.46□□□□□ -2.02
CX3CL1P78423 RNU6-487P-201ENST00000365430 104 ntBASIC2.46□□□□□ -2.02
CX3CL1P78423 RNU6-827P-201ENST00000365553 106 ntBASIC2.46□□□□□ -2.02
CX3CL1P78423 U8.9-201ENST00000365667 134 ntBASIC2.46□□□□□ -2.02
CX3CL1P78423 RNU6-831P-201ENST00000384548 107 ntBASIC2.46□□□□□ -2.02
CX3CL1P78423 AL513475.1-201ENST00000406602 315 ntBASIC2.46□□□□□ -2.02
CX3CL1P78423 RNU6-1328P-201ENST00000410938 106 ntBASIC2.46□□□□□ -2.02
CX3CL1P78423 VN1R36P-201ENST00000414936 291 ntBASIC2.46□□□□□ -2.02
CX3CL1P78423 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC2.46□□□□□ -2.02
CX3CL1P78423 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC2.46□□□□□ -2.02
CX3CL1P78423 BX510359.1-201ENST00000456973 237 ntBASIC2.46□□□□□ -2.02
CX3CL1P78423 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC2.46□□□□□ -2.02
CX3CL1P78423 AC010486.1-201ENST00000511793 424 ntBASIC2.46□□□□□ -2.02
CX3CL1P78423 AC025465.4-201ENST00000513422 638 ntBASIC2.46□□□□□ -2.02
CX3CL1P78423 RNU5B-3P-201ENST00000516601 115 ntBASIC2.46□□□□□ -2.02
CX3CL1P78423 RNU6-256P-201ENST00000516747 97 ntBASIC2.46□□□□□ -2.02
CX3CL1P78423 AC104576.1-201ENST00000524225 88 ntBASIC2.46□□□□□ -2.02
CX3CL1P78423 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC2.46□□□□□ -2.02
CX3CL1P78423 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC2.46□□□□□ -2.02
CX3CL1P78423 MIR5004-201ENST00000579078 107 ntBASIC2.46□□□□□ -2.02
CX3CL1P78423 UBL5P2-201ENST00000583788 219 ntBASIC2.46□□□□□ -2.02
CX3CL1P78423 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC2.46□□□□□ -2.02
CX3CL1P78423 MIR3942-201ENST00000585264 109 ntBASIC2.46□□□□□ -2.02
CX3CL1P78423 AC078899.3-201ENST00000599065 212 ntBASIC2.46□□□□□ -2.02
CX3CL1P78423 ELOCP5-201ENST00000604924 333 ntBASIC2.46□□□□□ -2.02
CX3CL1P78423 AL137843.1-201ENST00000605078 385 ntBASIC2.46□□□□□ -2.02
CX3CL1P78423 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC2.46□□□□□ -2.02
CX3CL1P78423 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
CX3CL1P78423 AL109809.4-201ENST00000603520 2185 ntBASIC2.46□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms