Protein–RNA interactions for Protein: P78363

ABCA4, Retinal-specific ATP-binding cassette transporter, humanhuman

Predictions only

Length 2,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4P78363 MRPS36P1-201ENST00000421291 307 ntBASIC0.63□□□□□ -2.31
ABCA4P78363 AC246680.2-201ENST00000422106 389 ntBASIC0.63□□□□□ -2.31
ABCA4P78363 AC244035.1-201ENST00000430042 390 ntBASIC0.63□□□□□ -2.31
ABCA4P78363 CR769776.1-201ENST00000441254 787 ntBASIC0.63□□□□□ -2.31
ABCA4P78363 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC0.63□□□□□ -2.31
ABCA4P78363 RNU6-775P-201ENST00000459318 96 ntBASIC0.63□□□□□ -2.31
ABCA4P78363 ACA59.2-201ENST00000517061 156 ntBASIC0.63□□□□□ -2.31
ABCA4P78363 CYCSP23-201ENST00000519781 313 ntBASIC0.63□□□□□ -2.31
ABCA4P78363 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC0.63□□□□□ -2.31
ABCA4P78363 AP003072.2-201ENST00000527756 676 ntBASIC0.63□□□□□ -2.31
ABCA4P78363 POC1B-211ENST00000549504 581 ntTSL 5 BASIC0.63□□□□□ -2.31
ABCA4P78363 AC233702.2-202ENST00000562547 291 ntBASIC0.63□□□□□ -2.31
ABCA4P78363 AC136619.2-201ENST00000563361 631 ntBASIC0.63□□□□□ -2.31
ABCA4P78363 AC136932.1-201ENST00000574771 208 ntBASIC0.63□□□□□ -2.31
ABCA4P78363 AC146944.4-201ENST00000602697 718 ntBASIC0.63□□□□□ -2.31
ABCA4P78363 AC099654.5-201ENST00000636479 350 ntBASIC0.63□□□□□ -2.31
ABCA4P78363 FARSBP1-201ENST00000435808 1778 ntBASIC0.63□□□□□ -2.31
ABCA4P78363 SNRPEP3-201ENST00000338402 276 ntBASIC0.63□□□□□ -2.31
ABCA4P78363 Y_RNA.25-201ENST00000362528 102 ntBASIC0.63□□□□□ -2.31
ABCA4P78363 RNU6-839P-201ENST00000363347 108 ntBASIC0.63□□□□□ -2.31
ABCA4P78363 RNU6-359P-201ENST00000365466 108 ntBASIC0.63□□□□□ -2.31
ABCA4P78363 RNU6-432P-201ENST00000384196 109 ntBASIC0.63□□□□□ -2.31
ABCA4P78363 TAF13P2-201ENST00000416876 286 ntBASIC0.63□□□□□ -2.31
ABCA4P78363 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC0.63□□□□□ -2.31
ABCA4P78363 UBE2V1P4-201ENST00000425374 344 ntBASIC0.63□□□□□ -2.31
ABCA4P78363 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC0.63□□□□□ -2.31
ABCA4P78363 AC010409.1-201ENST00000487382 476 ntBASIC0.63□□□□□ -2.31
ABCA4P78363 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC0.63□□□□□ -2.31
ABCA4P78363 AC093677.1-201ENST00000514414 678 ntBASIC0.63□□□□□ -2.31
ABCA4P78363 AP003392.2-201ENST00000527269 208 ntBASIC0.63□□□□□ -2.31
ABCA4P78363 AF129408.1-201ENST00000608767 431 ntBASIC0.63□□□□□ -2.31
ABCA4P78363 AC006213.5-201ENST00000619673 288 ntBASIC0.63□□□□□ -2.31
ABCA4P78363 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC0.63□□□□□ -2.31
ABCA4P78363 MIR424-201ENST00000362227 98 ntBASIC0.62□□□□□ -2.31
ABCA4P78363 Y_RNA.136-201ENST00000363444 102 ntBASIC0.62□□□□□ -2.31
ABCA4P78363 RNU6-1066P-201ENST00000363573 105 ntBASIC0.62□□□□□ -2.31
ABCA4P78363 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC0.62□□□□□ -2.31
ABCA4P78363 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC0.62□□□□□ -2.31
ABCA4P78363 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC0.62□□□□□ -2.31
ABCA4P78363 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC0.62□□□□□ -2.31
ABCA4P78363 snoU13.19-201ENST00000459148 104 ntBASIC0.62□□□□□ -2.31
ABCA4P78363 AC008379.1-201ENST00000463655 464 ntBASIC0.62□□□□□ -2.31
ABCA4P78363 AC021146.2-201ENST00000504736 556 ntBASIC0.62□□□□□ -2.31
ABCA4P78363 RNA5SP165-201ENST00000517142 115 ntBASIC0.62□□□□□ -2.31
ABCA4P78363 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC0.62□□□□□ -2.31
ABCA4P78363 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC0.62□□□□□ -2.31
ABCA4P78363 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC0.62□□□□□ -2.31
ABCA4P78363 RRN3P3-201ENST00000549207 578 ntBASIC0.62□□□□□ -2.31
ABCA4P78363 AC012213.3-201ENST00000577199 777 ntBASIC0.62□□□□□ -2.31
ABCA4P78363 MIR3937-201ENST00000580135 106 ntBASIC0.62□□□□□ -2.31
ABCA4P78363 AC091152.3-201ENST00000604227 325 ntBASIC0.62□□□□□ -2.31
ABCA4P78363 AL118556.2-201ENST00000614375 824 ntBASIC0.62□□□□□ -2.31
ABCA4P78363 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC0.62□□□□□ -2.31
ABCA4P78363 AC091925.1-201ENST00000623204 462 ntBASIC0.62□□□□□ -2.31
ABCA4P78363 UBE2Q2P1-202ENST00000354771 883 ntBASIC0.62□□□□□ -2.31
ABCA4P78363 SNORD33-201ENST00000362761 85 ntBASIC0.62□□□□□ -2.31
ABCA4P78363 RNA5SP501-201ENST00000410990 112 ntBASIC0.62□□□□□ -2.31
ABCA4P78363 RPL39P29-201ENST00000447779 157 ntBASIC0.62□□□□□ -2.31
ABCA4P78363 AC012308.1-201ENST00000451232 178 ntBASIC0.62□□□□□ -2.31
ABCA4P78363 PRELID3BP1-201ENST00000457142 540 ntBASIC0.62□□□□□ -2.31
ABCA4P78363 AC013267.1-201ENST00000458227 267 ntBASIC0.62□□□□□ -2.31
ABCA4P78363 AP001324.2-201ENST00000461163 319 ntBASIC0.62□□□□□ -2.31
ABCA4P78363 AC079140.2-201ENST00000506193 142 ntBASIC0.62□□□□□ -2.31
ABCA4P78363 MTCO3P42-201ENST00000509488 518 ntBASIC0.62□□□□□ -2.31
ABCA4P78363 MTCO3P39-201ENST00000514812 518 ntBASIC0.62□□□□□ -2.31
ABCA4P78363 OR5B19P-201ENST00000531766 928 ntBASIC0.62□□□□□ -2.31
ABCA4P78363 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC0.62□□□□□ -2.31
ABCA4P78363 AC090615.1-201ENST00000577519 154 ntBASIC0.62□□□□□ -2.31
ABCA4P78363 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC0.62□□□□□ -2.31
ABCA4P78363 AC012065.4-201ENST00000602445 679 ntBASIC0.62□□□□□ -2.31
ABCA4P78363 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC0.62□□□□□ -2.31
ABCA4P78363 MIR1264-201ENST00000616374 69 ntBASIC0.62□□□□□ -2.31
ABCA4P78363 AC002550.2-201ENST00000621246 394 ntBASIC0.62□□□□□ -2.31
ABCA4P78363 AC104820.1-201ENST00000624183 307 ntBASIC0.62□□□□□ -2.31
ABCA4P78363 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC0.62□□□□□ -2.31
ABCA4P78363 SNORD115-48-201ENST00000364764 76 ntBASIC0.61□□□□□ -2.31
ABCA4P78363 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC0.61□□□□□ -2.31
ABCA4P78363 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC0.61□□□□□ -2.31
ABCA4P78363 PTP4A1P4-201ENST00000512479 322 ntBASIC0.61□□□□□ -2.31
ABCA4P78363 RNU5B-3P-201ENST00000516601 115 ntBASIC0.61□□□□□ -2.31
ABCA4P78363 MIR4782-201ENST00000577987 79 ntBASIC0.61□□□□□ -2.31
ABCA4P78363 AC073544.2-201ENST00000601155 540 ntBASIC0.61□□□□□ -2.31
ABCA4P78363 HSPE1P19-201ENST00000603327 295 ntBASIC0.61□□□□□ -2.31
ABCA4P78363 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC0.61□□□□□ -2.31
ABCA4P78363 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC0.61□□□□□ -2.31
ABCA4P78363 AC138393.1-203ENST00000327086 343 ntBASIC0.61□□□□□ -2.31
ABCA4P78363 AL353621.1-201ENST00000418219 243 ntBASIC0.61□□□□□ -2.31
ABCA4P78363 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC0.61□□□□□ -2.31
ABCA4P78363 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC0.61□□□□□ -2.31
ABCA4P78363 RNA5SP285-201ENST00000516619 119 ntBASIC0.61□□□□□ -2.31
ABCA4P78363 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC0.61□□□□□ -2.31
ABCA4P78363 MIR5589-201ENST00000579442 60 ntBASIC0.61□□□□□ -2.31
ABCA4P78363 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC0.61□□□□□ -2.31
ABCA4P78363 AC012676.2-201ENST00000619258 186 ntBASIC0.61□□□□□ -2.31
ABCA4P78363 RNU6-223P-201ENST00000362830 107 ntBASIC0.6□□□□□ -2.31
ABCA4P78363 RNU6-942P-201ENST00000363002 107 ntBASIC0.6□□□□□ -2.31
ABCA4P78363 RNU1-124P-201ENST00000363861 145 ntBASIC0.6□□□□□ -2.31
ABCA4P78363 MIR1265-201ENST00000408444 86 ntBASIC0.6□□□□□ -2.31
ABCA4P78363 AL161651.1-201ENST00000440882 223 ntBASIC0.6□□□□□ -2.31
ABCA4P78363 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC0.6□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 112 ms