Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.89□□□□□ -1.79
YBX1P67809 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC3.89□□□□□ -1.79
YBX1P67809 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
YBX1P67809 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
YBX1P67809 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
YBX1P67809 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC3.88□□□□□ -1.79
YBX1P67809 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
YBX1P67809 DEFB108F-201ENST00000344638 222 ntBASIC3.88□□□□□ -1.79
YBX1P67809 RNU6-290P-201ENST00000365212 101 ntBASIC3.88□□□□□ -1.79
YBX1P67809 Y_RNA.333-201ENST00000365274 102 ntBASIC3.88□□□□□ -1.79
YBX1P67809 RNU5E-7P-201ENST00000365290 117 ntBASIC3.88□□□□□ -1.79
YBX1P67809 PTMAP2-201ENST00000397627 327 ntBASIC3.88□□□□□ -1.79
YBX1P67809 PPIAP31-201ENST00000405422 495 ntBASIC3.88□□□□□ -1.79
YBX1P67809 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.88□□□□□ -1.79
YBX1P67809 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.88□□□□□ -1.79
YBX1P67809 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC3.88□□□□□ -1.79
YBX1P67809 AL162151.2-201ENST00000448875 158 ntBASIC3.88□□□□□ -1.79
YBX1P67809 RN7SL132P-201ENST00000478131 296 ntBASIC3.88□□□□□ -1.79
YBX1P67809 RPL29P14-201ENST00000495837 428 ntBASIC3.88□□□□□ -1.79
YBX1P67809 AC078918.1-201ENST00000498515 228 ntBASIC3.88□□□□□ -1.79
YBX1P67809 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC3.88□□□□□ -1.79
YBX1P67809 AKIRIN2P1-201ENST00000505898 352 ntBASIC3.88□□□□□ -1.79
YBX1P67809 SEPT14P8-201ENST00000508026 178 ntBASIC3.88□□□□□ -1.79
YBX1P67809 AC005921.1-201ENST00000510589 286 ntBASIC3.88□□□□□ -1.79
YBX1P67809 RNU6-1278P-201ENST00000516130 107 ntBASIC3.88□□□□□ -1.79
YBX1P67809 Y_RNA.683-201ENST00000516508 93 ntBASIC3.88□□□□□ -1.79
YBX1P67809 SNORA31.19-201ENST00000517079 126 ntBASIC3.88□□□□□ -1.79
YBX1P67809 RNA5SP290-201ENST00000517133 127 ntBASIC3.88□□□□□ -1.79
YBX1P67809 AC005255.1-201ENST00000593748 216 ntBASIC3.88□□□□□ -1.79
YBX1P67809 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
YBX1P67809 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC3.88□□□□□ -1.79
YBX1P67809 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
YBX1P67809 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC3.88□□□□□ -1.79
YBX1P67809 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC3.88□□□□□ -1.79
YBX1P67809 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
YBX1P67809 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
YBX1P67809 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.87□□□□□ -1.79
YBX1P67809 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
YBX1P67809 RNU6-858P-201ENST00000362436 107 ntBASIC3.87□□□□□ -1.79
YBX1P67809 RNU4-90P-201ENST00000362773 141 ntBASIC3.87□□□□□ -1.79
YBX1P67809 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.87□□□□□ -1.79
YBX1P67809 RNU6-682P-201ENST00000363843 106 ntBASIC3.87□□□□□ -1.79
YBX1P67809 RNA5SP399-201ENST00000364003 117 ntBASIC3.87□□□□□ -1.79
YBX1P67809 RNA5SP235-201ENST00000365411 114 ntBASIC3.87□□□□□ -1.79
YBX1P67809 RNU6-926P-201ENST00000384075 107 ntBASIC3.87□□□□□ -1.79
YBX1P67809 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.87□□□□□ -1.79
YBX1P67809 AC007919.1-201ENST00000429380 217 ntBASIC3.87□□□□□ -1.79
YBX1P67809 AC098831.1-201ENST00000440661 216 ntBASIC3.87□□□□□ -1.79
YBX1P67809 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.87□□□□□ -1.79
YBX1P67809 AP000873.1-201ENST00000463987 400 ntBASIC3.87□□□□□ -1.79
YBX1P67809 RPL21P104-201ENST00000464143 478 ntBASIC3.87□□□□□ -1.79
YBX1P67809 RN7SL542P-201ENST00000467147 294 ntBASIC3.87□□□□□ -1.79
YBX1P67809 AC139453.3-201ENST00000493276 369 ntBASIC3.87□□□□□ -1.79
YBX1P67809 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC3.87□□□□□ -1.79
YBX1P67809 RNU6-1256P-201ENST00000516539 103 ntBASIC3.87□□□□□ -1.79
YBX1P67809 RNU6-861P-201ENST00000516745 106 ntBASIC3.87□□□□□ -1.79
YBX1P67809 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
YBX1P67809 AC060766.3-201ENST00000591442 263 ntBASIC3.87□□□□□ -1.79
YBX1P67809 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.87□□□□□ -1.79
YBX1P67809 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.87□□□□□ -1.79
YBX1P67809 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.87□□□□□ -1.79
YBX1P67809 AC112200.1-201ENST00000625015 234 ntBASIC3.87□□□□□ -1.79
YBX1P67809 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
YBX1P67809 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.87□□□□□ -1.79
YBX1P67809 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC3.87□□□□□ -1.79
YBX1P67809 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
YBX1P67809 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
YBX1P67809 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.86□□□□□ -1.79
YBX1P67809 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.86□□□□□ -1.79
YBX1P67809 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
YBX1P67809 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
YBX1P67809 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
YBX1P67809 MIR208A-201ENST00000362287 71 ntBASIC3.86□□□□□ -1.79
YBX1P67809 Y_RNA.44-201ENST00000362676 108 ntBASIC3.86□□□□□ -1.79
YBX1P67809 Y_RNA.122-201ENST00000363331 96 ntBASIC3.86□□□□□ -1.79
YBX1P67809 RNA5SP322-201ENST00000363617 119 ntBASIC3.86□□□□□ -1.79
YBX1P67809 RNU6-336P-201ENST00000364891 107 ntBASIC3.86□□□□□ -1.79
YBX1P67809 MIR708-201ENST00000390708 88 ntBASIC3.86□□□□□ -1.79
YBX1P67809 SNORA53-201ENST00000391141 249 ntBASIC3.86□□□□□ -1.79
YBX1P67809 BTF3L4P2-201ENST00000392798 346 ntBASIC3.86□□□□□ -1.79
YBX1P67809 Y_RNA.626-201ENST00000411288 95 ntBASIC3.86□□□□□ -1.79
YBX1P67809 CRYBB2P1-203ENST00000415709 538 ntBASIC3.86□□□□□ -1.79
YBX1P67809 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.86□□□□□ -1.79
YBX1P67809 Z82188.1-201ENST00000436709 154 ntBASIC3.86□□□□□ -1.79
YBX1P67809 AL356535.1-201ENST00000440335 398 ntBASIC3.86□□□□□ -1.79
YBX1P67809 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.86□□□□□ -1.79
YBX1P67809 snoU13.30-201ENST00000458951 104 ntBASIC3.86□□□□□ -1.79
YBX1P67809 snoU109.2-201ENST00000459316 135 ntBASIC3.86□□□□□ -1.79
YBX1P67809 RPS20P22-201ENST00000473700 357 ntBASIC3.86□□□□□ -1.79
YBX1P67809 RPS26P21-201ENST00000475397 348 ntBASIC3.86□□□□□ -1.79
YBX1P67809 RPL31P13-201ENST00000484151 370 ntBASIC3.86□□□□□ -1.79
YBX1P67809 AL132838.2-201ENST00000492041 314 ntBASIC3.86□□□□□ -1.79
YBX1P67809 AC074198.2-201ENST00000508153 258 ntBASIC3.86□□□□□ -1.79
YBX1P67809 SCARNA15.2-201ENST00000516409 127 ntBASIC3.86□□□□□ -1.79
YBX1P67809 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.86□□□□□ -1.79
YBX1P67809 ATP5F1P5-201ENST00000526403 760 ntBASIC3.86□□□□□ -1.79
YBX1P67809 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC3.86□□□□□ -1.79
YBX1P67809 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.86□□□□□ -1.79
YBX1P67809 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC3.86□□□□□ -1.79
YBX1P67809 MIR548AI-201ENST00000579940 88 ntBASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 83.1 ms