Protein–RNA interactions for Protein: P60709

ACTB, Actin, cytoplasmic 1, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP60709 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.28□□□□□ -2.21
ACTBP60709 FARSBP1-201ENST00000435808 1778 ntBASIC1.27□□□□□ -2.21
ACTBP60709 RNU6-942P-201ENST00000363002 107 ntBASIC1.27□□□□□ -2.21
ACTBP60709 RNU6-511P-201ENST00000363496 107 ntBASIC1.27□□□□□ -2.21
ACTBP60709 RNA5SP190-201ENST00000365222 118 ntBASIC1.27□□□□□ -2.21
ACTBP60709 RNU6-723P-201ENST00000383973 107 ntBASIC1.27□□□□□ -2.21
ACTBP60709 RNU6-1274P-201ENST00000384557 107 ntBASIC1.27□□□□□ -2.21
ACTBP60709 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC1.27□□□□□ -2.21
ACTBP60709 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
ACTBP60709 RNU2-36P-201ENST00000410361 191 ntBASIC1.27□□□□□ -2.21
ACTBP60709 RNA5SP501-201ENST00000410990 112 ntBASIC1.27□□□□□ -2.21
ACTBP60709 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC1.27□□□□□ -2.21
ACTBP60709 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.27□□□□□ -2.21
ACTBP60709 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC1.27□□□□□ -2.21
ACTBP60709 VN1R108P-201ENST00000431580 830 ntBASIC1.27□□□□□ -2.21
ACTBP60709 MTCO3P5-201ENST00000433620 714 ntBASIC1.27□□□□□ -2.21
ACTBP60709 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC1.27□□□□□ -2.21
ACTBP60709 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC1.27□□□□□ -2.21
ACTBP60709 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC1.27□□□□□ -2.21
ACTBP60709 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC1.27□□□□□ -2.21
ACTBP60709 Y_RNA.638-201ENST00000459374 113 ntBASIC1.27□□□□□ -2.21
ACTBP60709 AC132942.1-201ENST00000486753 483 ntBASIC1.27□□□□□ -2.21
ACTBP60709 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC1.27□□□□□ -2.21
ACTBP60709 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC1.27□□□□□ -2.21
ACTBP60709 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC1.27□□□□□ -2.21
ACTBP60709 SUB1P3-201ENST00000564581 315 ntBASIC1.27□□□□□ -2.21
ACTBP60709 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC1.27□□□□□ -2.21
ACTBP60709 VN1R82P-201ENST00000601481 356 ntBASIC1.27□□□□□ -2.21
ACTBP60709 AP001485.1-201ENST00000604799 199 ntBASIC1.27□□□□□ -2.21
ACTBP60709 AL592221.1-201ENST00000605266 382 ntBASIC1.27□□□□□ -2.21
ACTBP60709 AC022893.3-201ENST00000607665 437 ntBASIC1.27□□□□□ -2.21
ACTBP60709 AC093788.1-201ENST00000609356 927 ntBASIC1.27□□□□□ -2.21
ACTBP60709 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC1.27□□□□□ -2.21
ACTBP60709 AC092656.1-203ENST00000624134 423 ntBASIC1.27□□□□□ -2.21
ACTBP60709 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.26□□□□□ -2.21
ACTBP60709 CBX3P1-201ENST00000325243 554 ntBASIC1.26□□□□□ -2.21
ACTBP60709 Y_RNA.33-201ENST00000362591 102 ntBASIC1.26□□□□□ -2.21
ACTBP60709 RNU1-17P-201ENST00000363022 152 ntBASIC1.26□□□□□ -2.21
ACTBP60709 RNU6-529P-201ENST00000363383 104 ntBASIC1.26□□□□□ -2.21
ACTBP60709 RNU6-1164P-201ENST00000364428 107 ntBASIC1.26□□□□□ -2.21
ACTBP60709 RNU6-622P-201ENST00000384272 103 ntBASIC1.26□□□□□ -2.21
ACTBP60709 MIR517C-201ENST00000385103 95 ntBASIC1.26□□□□□ -2.21
ACTBP60709 RNU6-1000P-201ENST00000391066 106 ntBASIC1.26□□□□□ -2.21
ACTBP60709 RNU1-78P-201ENST00000391248 165 ntBASIC1.26□□□□□ -2.21
ACTBP60709 AC016831.2-201ENST00000417179 352 ntBASIC1.26□□□□□ -2.21
ACTBP60709 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC1.26□□□□□ -2.21
ACTBP60709 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC1.26□□□□□ -2.21
ACTBP60709 AL591212.2-201ENST00000433923 257 ntBASIC1.26□□□□□ -2.21
ACTBP60709 PRELID3BP1-201ENST00000457142 540 ntBASIC1.26□□□□□ -2.21
ACTBP60709 AMD1P1-201ENST00000457220 922 ntBASIC1.26□□□□□ -2.21
ACTBP60709 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC1.26□□□□□ -2.21
ACTBP60709 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC1.26□□□□□ -2.21
ACTBP60709 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.26□□□□□ -2.21
ACTBP60709 AC018630.3-201ENST00000542637 96 ntBASIC1.26□□□□□ -2.21
ACTBP60709 ARL2BPP2-201ENST00000550907 489 ntBASIC1.26□□□□□ -2.21
ACTBP60709 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.26□□□□□ -2.21
ACTBP60709 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC1.26□□□□□ -2.21
ACTBP60709 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC1.26□□□□□ -2.21
ACTBP60709 KC877982.1-201ENST00000602313 470 ntBASIC1.26□□□□□ -2.21
ACTBP60709 AC174048.1-201ENST00000603389 144 ntBASIC1.26□□□□□ -2.21
ACTBP60709 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC1.26□□□□□ -2.21
ACTBP60709 MIR3529-201ENST00000637713 78 ntBASIC1.26□□□□□ -2.21
ACTBP60709 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
ACTBP60709 RNU1-58P-201ENST00000362413 163 ntBASIC1.25□□□□□ -2.21
ACTBP60709 SNORA4.1-201ENST00000364263 144 ntBASIC1.25□□□□□ -2.21
ACTBP60709 RNU6-395P-201ENST00000365662 106 ntBASIC1.25□□□□□ -2.21
ACTBP60709 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.25□□□□□ -2.21
ACTBP60709 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC1.25□□□□□ -2.21
ACTBP60709 SNORD26-201ENST00000384147 75 ntBASIC1.25□□□□□ -2.21
ACTBP60709 RNU4-22P-201ENST00000411058 166 ntBASIC1.25□□□□□ -2.21
ACTBP60709 RNU2-32P-201ENST00000411193 191 ntBASIC1.25□□□□□ -2.21
ACTBP60709 SRIP3-201ENST00000413200 219 ntBASIC1.25□□□□□ -2.21
ACTBP60709 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC1.25□□□□□ -2.21
ACTBP60709 USP9YP18-201ENST00000425912 695 ntBASIC1.25□□□□□ -2.21
ACTBP60709 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC1.25□□□□□ -2.21
ACTBP60709 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC1.25□□□□□ -2.21
ACTBP60709 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1.25□□□□□ -2.21
ACTBP60709 AL606517.1-201ENST00000446914 387 ntBASIC1.25□□□□□ -2.21
ACTBP60709 AC245517.4-201ENST00000448601 281 ntBASIC1.25□□□□□ -2.21
ACTBP60709 AL590365.1-201ENST00000450788 243 ntBASIC1.25□□□□□ -2.21
ACTBP60709 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC1.25□□□□□ -2.21
ACTBP60709 ZNF736P4Y-201ENST00000454995 1243 ntBASIC1.25□□□□□ -2.21
ACTBP60709 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC1.25□□□□□ -2.21
ACTBP60709 snoU13.14-201ENST00000459372 104 ntBASIC1.25□□□□□ -2.21
ACTBP60709 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC1.25□□□□□ -2.21
ACTBP60709 AL121594.1-201ENST00000475906 575 ntBASIC1.25□□□□□ -2.21
ACTBP60709 AC117532.1-201ENST00000514638 323 ntBASIC1.25□□□□□ -2.21
ACTBP60709 RNU6-677P-201ENST00000516914 101 ntBASIC1.25□□□□□ -2.21
ACTBP60709 RN7SKP256-201ENST00000517201 314 ntBASIC1.25□□□□□ -2.21
ACTBP60709 AP005660.1-201ENST00000522972 293 ntBASIC1.25□□□□□ -2.21
ACTBP60709 AP003392.2-201ENST00000527269 208 ntBASIC1.25□□□□□ -2.21
ACTBP60709 AP004247.1-201ENST00000531556 1289 ntBASIC1.25□□□□□ -2.21
ACTBP60709 AC023813.2-201ENST00000564321 469 ntBASIC1.25□□□□□ -2.21
ACTBP60709 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.25□□□□□ -2.21
ACTBP60709 SNORD53B-201ENST00000577887 78 ntBASIC1.25□□□□□ -2.21
ACTBP60709 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC1.25□□□□□ -2.21
ACTBP60709 BNIP3P30-201ENST00000601184 574 ntBASIC1.25□□□□□ -2.21
ACTBP60709 AL022154.1-201ENST00000604698 785 ntBASIC1.25□□□□□ -2.21
ACTBP60709 AL670379.2-201ENST00000604983 252 ntBASIC1.25□□□□□ -2.21
ACTBP60709 AL670379.4-201ENST00000605279 254 ntBASIC1.25□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 112.5 ms