Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 SNORA43.2-201ENST00000516652 128 ntBASIC4.09□□□□□ -1.75
PMS1P54277 IGKV2D-19-201ENST00000523346 262 ntBASIC4.09□□□□□ -1.75
PMS1P54277 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC4.09□□□□□ -1.75
PMS1P54277 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC4.09□□□□□ -1.75
PMS1P54277 AC006557.5-201ENST00000603126 811 ntBASIC4.09□□□□□ -1.75
PMS1P54277 DLEU2_2.2-201ENST00000615474 90 ntBASIC4.09□□□□□ -1.75
PMS1P54277 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC4.09□□□□□ -1.75
PMS1P54277 AC244205.2-202ENST00000635781 342 ntBASIC4.09□□□□□ -1.75
PMS1P54277 U6.104-201ENST00000637979 90 ntBASIC4.09□□□□□ -1.75
PMS1P54277 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC4.09□□□□□ -1.75
PMS1P54277 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
PMS1P54277 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC4.09□□□□□ -1.76
PMS1P54277 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4.09□□□□□ -1.76
PMS1P54277 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
PMS1P54277 AC022336.2-201ENST00000568966 2538 ntBASIC4.09□□□□□ -1.76
PMS1P54277 OR56A5-201ENST00000340110 738 ntBASIC4.08□□□□□ -1.76
PMS1P54277 SNORA70.2-201ENST00000364506 135 ntBASIC4.08□□□□□ -1.76
PMS1P54277 RNU6-898P-201ENST00000365627 104 ntBASIC4.08□□□□□ -1.76
PMS1P54277 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
PMS1P54277 Z98749.2-208ENST00000381646 500 ntBASIC4.08□□□□□ -1.76
PMS1P54277 RNU1-73P-201ENST00000383971 164 ntBASIC4.08□□□□□ -1.76
PMS1P54277 SNORA12.2-201ENST00000391040 156 ntBASIC4.08□□□□□ -1.76
PMS1P54277 MIR190B-201ENST00000401119 79 ntBASIC4.08□□□□□ -1.76
PMS1P54277 SNORA3.3-201ENST00000408712 125 ntBASIC4.08□□□□□ -1.76
PMS1P54277 AP000275.1-201ENST00000411943 390 ntBASIC4.08□□□□□ -1.76
PMS1P54277 AL356968.1-201ENST00000416622 474 ntBASIC4.08□□□□□ -1.76
PMS1P54277 AC004975.1-201ENST00000428733 208 ntBASIC4.08□□□□□ -1.76
PMS1P54277 FCF1P4-201ENST00000448326 183 ntBASIC4.08□□□□□ -1.76
PMS1P54277 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC4.08□□□□□ -1.76
PMS1P54277 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC4.08□□□□□ -1.76
PMS1P54277 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC4.08□□□□□ -1.76
PMS1P54277 RNU6-408P-201ENST00000515910 100 ntBASIC4.08□□□□□ -1.76
PMS1P54277 RNU7-175P-201ENST00000515915 61 ntBASIC4.08□□□□□ -1.76
PMS1P54277 RNU2-53P-201ENST00000516257 147 ntBASIC4.08□□□□□ -1.76
PMS1P54277 AC109329.1-201ENST00000518744 317 ntBASIC4.08□□□□□ -1.76
PMS1P54277 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
PMS1P54277 HSPE1P20-201ENST00000538133 289 ntBASIC4.08□□□□□ -1.76
PMS1P54277 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC4.08□□□□□ -1.76
PMS1P54277 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC4.08□□□□□ -1.76
PMS1P54277 AC024153.1-201ENST00000603103 365 ntBASIC4.08□□□□□ -1.76
PMS1P54277 B3GNTL1P2-201ENST00000603673 288 ntBASIC4.08□□□□□ -1.76
PMS1P54277 AL354798.1-201ENST00000622505 329 ntBASIC4.08□□□□□ -1.76
PMS1P54277 AC243829.7-201ENST00000633081 225 ntBASIC4.08□□□□□ -1.76
PMS1P54277 U2.21-201ENST00000637295 81 ntBASIC4.08□□□□□ -1.76
PMS1P54277 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC4.08□□□□□ -1.76
PMS1P54277 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
PMS1P54277 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.08□□□□□ -1.76
PMS1P54277 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
PMS1P54277 AC007656.2-201ENST00000624902 4547 ntBASIC4.08□□□□□ -1.76
PMS1P54277 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.08□□□□□ -1.76
PMS1P54277 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
PMS1P54277 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC4.08□□□□□ -1.76
PMS1P54277 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
PMS1P54277 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
PMS1P54277 AC233263.6-201ENST00000631132 1963 ntBASIC4.07□□□□□ -1.76
PMS1P54277 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.07□□□□□ -1.76
PMS1P54277 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
PMS1P54277 Y_RNA.19-201ENST00000362462 99 ntBASIC4.07□□□□□ -1.76
PMS1P54277 RNU6-778P-201ENST00000363269 103 ntBASIC4.07□□□□□ -1.76
PMS1P54277 RNU6-884P-201ENST00000363889 107 ntBASIC4.07□□□□□ -1.76
PMS1P54277 RNU6-770P-201ENST00000363929 105 ntBASIC4.07□□□□□ -1.76
PMS1P54277 Y_RNA.405-201ENST00000383979 100 ntBASIC4.07□□□□□ -1.76
PMS1P54277 Y_RNA.451-201ENST00000384200 100 ntBASIC4.07□□□□□ -1.76
PMS1P54277 RNU6-472P-201ENST00000384299 107 ntBASIC4.07□□□□□ -1.76
PMS1P54277 Y_RNA.524-201ENST00000384564 100 ntBASIC4.07□□□□□ -1.76
PMS1P54277 Y_RNA.561-201ENST00000384694 100 ntBASIC4.07□□□□□ -1.76
PMS1P54277 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
PMS1P54277 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
PMS1P54277 TMEM167AP1-201ENST00000423409 219 ntBASIC4.07□□□□□ -1.76
PMS1P54277 AL591043.1-201ENST00000432461 424 ntBASIC4.07□□□□□ -1.76
PMS1P54277 HMGB3P8-201ENST00000449709 577 ntBASIC4.07□□□□□ -1.76
PMS1P54277 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC4.07□□□□□ -1.76
PMS1P54277 RNU7-87P-201ENST00000459343 62 ntBASIC4.07□□□□□ -1.76
PMS1P54277 AC034236.1-201ENST00000469891 373 ntBASIC4.07□□□□□ -1.76
PMS1P54277 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC4.07□□□□□ -1.76
PMS1P54277 Y_RNA.706-201ENST00000516933 99 ntBASIC4.07□□□□□ -1.76
PMS1P54277 RNU6-388P-201ENST00000517012 105 ntBASIC4.07□□□□□ -1.76
PMS1P54277 RNU6-389P-201ENST00000517048 105 ntBASIC4.07□□□□□ -1.76
PMS1P54277 RNU6-897P-201ENST00000517135 105 ntBASIC4.07□□□□□ -1.76
PMS1P54277 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC4.07□□□□□ -1.76
PMS1P54277 AC104581.2-201ENST00000572227 430 ntBASIC4.07□□□□□ -1.76
PMS1P54277 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC4.07□□□□□ -1.76
PMS1P54277 KLKP1-201ENST00000595979 403 ntBASIC4.07□□□□□ -1.76
PMS1P54277 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC4.07□□□□□ -1.76
PMS1P54277 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC4.07□□□□□ -1.76
PMS1P54277 AL731566.2-201ENST00000618971 317 ntBASIC4.07□□□□□ -1.76
PMS1P54277 AC130454.1-201ENST00000622948 401 ntBASIC4.07□□□□□ -1.76
PMS1P54277 AC097372.5-201ENST00000623665 376 ntBASIC4.07□□□□□ -1.76
PMS1P54277 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC4.07□□□□□ -1.76
PMS1P54277 Z75746.1-201ENST00000440243 2080 ntBASIC4.07□□□□□ -1.76
PMS1P54277 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC4.07□□□□□ -1.76
PMS1P54277 AC009541.1-201ENST00000438279 2662 ntBASIC4.07□□□□□ -1.76
PMS1P54277 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
PMS1P54277 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
PMS1P54277 SRP72P2-201ENST00000344851 1979 ntBASIC4.06□□□□□ -1.76
PMS1P54277 Y_RNA.64-201ENST00000362845 102 ntBASIC4.06□□□□□ -1.76
PMS1P54277 RNU1-76P-201ENST00000362903 159 ntBASIC4.06□□□□□ -1.76
PMS1P54277 U3.13-201ENST00000364804 214 ntBASIC4.06□□□□□ -1.76
PMS1P54277 MIR518D-201ENST00000385014 87 ntBASIC4.06□□□□□ -1.76
PMS1P54277 RN7SKP58-201ENST00000411010 305 ntBASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 82.9 ms