Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.41□□□□□ -1.86
HMGA2P52926 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC3.41□□□□□ -1.86
HMGA2P52926 AL513043.1-201ENST00000439124 535 ntBASIC3.41□□□□□ -1.86
HMGA2P52926 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC3.41□□□□□ -1.86
HMGA2P52926 RPS26P56-201ENST00000444468 240 ntBASIC3.41□□□□□ -1.86
HMGA2P52926 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.41□□□□□ -1.86
HMGA2P52926 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.41□□□□□ -1.86
HMGA2P52926 AC008481.1-201ENST00000463278 396 ntBASIC3.41□□□□□ -1.86
HMGA2P52926 VN1R105P-201ENST00000486595 910 ntBASIC3.41□□□□□ -1.86
HMGA2P52926 SNORA27.4-201ENST00000516650 95 ntBASIC3.41□□□□□ -1.86
HMGA2P52926 AC069113.1-201ENST00000517763 267 ntBASIC3.41□□□□□ -1.86
HMGA2P52926 AL590705.4-201ENST00000532209 134 ntBASIC3.41□□□□□ -1.86
HMGA2P52926 MIR5582-201ENST00000579697 68 ntBASIC3.41□□□□□ -1.86
HMGA2P52926 MIR548X2-201ENST00000579776 100 ntBASIC3.41□□□□□ -1.86
HMGA2P52926 AC244505.7-201ENST00000599675 272 ntBASIC3.41□□□□□ -1.86
HMGA2P52926 AC073349.3-201ENST00000617616 186 ntBASIC3.41□□□□□ -1.86
HMGA2P52926 CR392039.4-201ENST00000624968 501 ntBASIC3.41□□□□□ -1.86
HMGA2P52926 MIR492-201ENST00000638676 116 ntBASIC3.41□□□□□ -1.86
HMGA2P52926 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.41□□□□□ -1.86
HMGA2P52926 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
HMGA2P52926 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC3.41□□□□□ -1.86
HMGA2P52926 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
HMGA2P52926 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.41□□□□□ -1.86
HMGA2P52926 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
HMGA2P52926 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
HMGA2P52926 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
HMGA2P52926 SLC2A3P1-201ENST00000519666 1451 ntBASIC3.41□□□□□ -1.86
HMGA2P52926 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC3.4□□□□□ -1.86
HMGA2P52926 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.4□□□□□ -1.86
HMGA2P52926 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
HMGA2P52926 PROS2P-201ENST00000474651 1951 ntBASIC3.4□□□□□ -1.86
HMGA2P52926 AP000756.2-201ENST00000624168 2567 ntBASIC3.4□□□□□ -1.86
HMGA2P52926 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.4□□□□□ -1.86
HMGA2P52926 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
HMGA2P52926 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.4□□□□□ -1.87
HMGA2P52926 RNU6-834P-201ENST00000362367 110 ntBASIC3.4□□□□□ -1.87
HMGA2P52926 RNU6-288P-201ENST00000363690 104 ntBASIC3.4□□□□□ -1.87
HMGA2P52926 RNU6-80P-201ENST00000384195 107 ntBASIC3.4□□□□□ -1.87
HMGA2P52926 Y_RNA.542-201ENST00000384641 111 ntBASIC3.4□□□□□ -1.87
HMGA2P52926 Y_RNA.563-201ENST00000384707 108 ntBASIC3.4□□□□□ -1.87
HMGA2P52926 MIR184-201ENST00000384962 84 ntBASIC3.4□□□□□ -1.87
HMGA2P52926 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.87
HMGA2P52926 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
HMGA2P52926 AL357139.1-201ENST00000407792 426 ntBASIC3.4□□□□□ -1.87
HMGA2P52926 RNU6ATAC16P-201ENST00000408591 138 ntBASIC3.4□□□□□ -1.87
HMGA2P52926 AC069218.2-201ENST00000411665 344 ntBASIC3.4□□□□□ -1.87
HMGA2P52926 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.4□□□□□ -1.87
HMGA2P52926 EBAG9P1-201ENST00000418955 543 ntBASIC3.4□□□□□ -1.87
HMGA2P52926 AC245028.1-201ENST00000423259 256 ntBASIC3.4□□□□□ -1.87
HMGA2P52926 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC3.4□□□□□ -1.87
HMGA2P52926 AC010655.1-201ENST00000449336 292 ntBASIC3.4□□□□□ -1.87
HMGA2P52926 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.4□□□□□ -1.87
HMGA2P52926 RPS4XP22-201ENST00000480755 780 ntBASIC3.4□□□□□ -1.87
HMGA2P52926 RNU1-86P-201ENST00000516108 154 ntBASIC3.4□□□□□ -1.87
HMGA2P52926 RNU6-659P-201ENST00000516454 104 ntBASIC3.4□□□□□ -1.87
HMGA2P52926 RNU1-107P-201ENST00000516617 154 ntBASIC3.4□□□□□ -1.87
HMGA2P52926 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC3.4□□□□□ -1.87
HMGA2P52926 CARD18-203ENST00000532895 422 ntTSL 2 BASIC3.4□□□□□ -1.87
HMGA2P52926 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.4□□□□□ -1.87
HMGA2P52926 MIR4423-201ENST00000580922 80 ntBASIC3.4□□□□□ -1.87
HMGA2P52926 B3GNTL1P2-201ENST00000603673 288 ntBASIC3.4□□□□□ -1.87
HMGA2P52926 AC005828.6-201ENST00000606610 232 ntBASIC3.4□□□□□ -1.87
HMGA2P52926 MIR6867-201ENST00000610636 67 ntBASIC3.4□□□□□ -1.87
HMGA2P52926 AC023043.4-201ENST00000612081 449 ntBASIC3.4□□□□□ -1.87
HMGA2P52926 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
HMGA2P52926 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC3.4□□□□□ -1.87
HMGA2P52926 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC3.4□□□□□ -1.87
HMGA2P52926 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC3.4□□□□□ -1.87
HMGA2P52926 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC3.4□□□□□ -1.87
HMGA2P52926 ZNF826P-207ENST00000622273 1910 ntBASIC3.4□□□□□ -1.87
HMGA2P52926 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
HMGA2P52926 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
HMGA2P52926 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
HMGA2P52926 AC107021.2-201ENST00000567714 2095 ntBASIC3.39□□□□□ -1.87
HMGA2P52926 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
HMGA2P52926 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
HMGA2P52926 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
HMGA2P52926 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.39□□□□□ -1.87
HMGA2P52926 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.39□□□□□ -1.87
HMGA2P52926 Y_RNA.324-201ENST00000365165 102 ntBASIC3.39□□□□□ -1.87
HMGA2P52926 RNU6-637P-201ENST00000384050 107 ntBASIC3.39□□□□□ -1.87
HMGA2P52926 RNU6-213P-201ENST00000384051 104 ntBASIC3.39□□□□□ -1.87
HMGA2P52926 RNU6-926P-201ENST00000384075 107 ntBASIC3.39□□□□□ -1.87
HMGA2P52926 RNU6-318P-201ENST00000384283 103 ntBASIC3.39□□□□□ -1.87
HMGA2P52926 RNU6-933P-201ENST00000384424 107 ntBASIC3.39□□□□□ -1.87
HMGA2P52926 RNU6-225P-201ENST00000384613 103 ntBASIC3.39□□□□□ -1.87
HMGA2P52926 SNORD78.2-201ENST00000391076 69 ntBASIC3.39□□□□□ -1.87
HMGA2P52926 EIF4A1P3-201ENST00000411521 244 ntBASIC3.39□□□□□ -1.87
HMGA2P52926 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.39□□□□□ -1.87
HMGA2P52926 AL162389.1-201ENST00000449233 177 ntBASIC3.39□□□□□ -1.87
HMGA2P52926 RNU6-27P-201ENST00000516146 107 ntBASIC3.39□□□□□ -1.87
HMGA2P52926 RNU6-579P-201ENST00000516879 102 ntBASIC3.39□□□□□ -1.87
HMGA2P52926 TGIF1P1-201ENST00000558095 802 ntBASIC3.39□□□□□ -1.87
HMGA2P52926 SNORD113-5-201ENST00000607261 78 ntBASIC3.39□□□□□ -1.87
HMGA2P52926 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC3.39□□□□□ -1.87
HMGA2P52926 DLD-214ENST00000639772 421 ntTSL 5 BASIC3.39□□□□□ -1.87
HMGA2P52926 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
HMGA2P52926 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
HMGA2P52926 SAGE2P-201ENST00000420011 2126 ntBASIC3.38□□□□□ -1.87
HMGA2P52926 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 124 ms