Protein–RNA interactions for Protein: P35452

HOXD12, Homeobox protein Hox-D12, humanhuman

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD12P35452 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
HOXD12P35452 ZBTB8OSP1-201ENST00000342688 498 ntBASIC3.27□□□□□ -1.89
HOXD12P35452 RNU6-266P-201ENST00000364225 107 ntBASIC3.27□□□□□ -1.89
HOXD12P35452 U8.9-201ENST00000365667 134 ntBASIC3.27□□□□□ -1.89
HOXD12P35452 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
HOXD12P35452 Y_RNA.384-201ENST00000383909 102 ntBASIC3.27□□□□□ -1.89
HOXD12P35452 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.27□□□□□ -1.89
HOXD12P35452 AL513477.1-202ENST00000417061 214 ntBASIC3.27□□□□□ -1.89
HOXD12P35452 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.27□□□□□ -1.89
HOXD12P35452 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC3.27□□□□□ -1.89
HOXD12P35452 AC009414.1-201ENST00000427200 443 ntBASIC3.27□□□□□ -1.89
HOXD12P35452 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.27□□□□□ -1.89
HOXD12P35452 Z96811.1-201ENST00000445880 108 ntBASIC3.27□□□□□ -1.89
HOXD12P35452 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.27□□□□□ -1.89
HOXD12P35452 RN7SL863P-201ENST00000462370 296 ntBASIC3.27□□□□□ -1.89
HOXD12P35452 AC139453.3-201ENST00000493276 369 ntBASIC3.27□□□□□ -1.89
HOXD12P35452 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.27□□□□□ -1.89
HOXD12P35452 AC104027.1-201ENST00000521887 300 ntBASIC3.27□□□□□ -1.89
HOXD12P35452 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC3.27□□□□□ -1.89
HOXD12P35452 HPRT1P3-201ENST00000539521 576 ntBASIC3.27□□□□□ -1.89
HOXD12P35452 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.27□□□□□ -1.89
HOXD12P35452 AL670379.10-201ENST00000604330 253 ntBASIC3.27□□□□□ -1.89
HOXD12P35452 MTND4LP5-201ENST00000605152 292 ntBASIC3.27□□□□□ -1.89
HOXD12P35452 AL670379.9-201ENST00000605428 253 ntBASIC3.27□□□□□ -1.89
HOXD12P35452 FAM157A-202ENST00000615155 405 ntBASIC3.27□□□□□ -1.89
HOXD12P35452 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
HOXD12P35452 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
HOXD12P35452 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.27□□□□□ -1.89
HOXD12P35452 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
HOXD12P35452 SNORD56.3-201ENST00000363507 71 ntBASIC3.26□□□□□ -1.89
HOXD12P35452 SNORD116-11-201ENST00000383882 92 ntBASIC3.26□□□□□ -1.89
HOXD12P35452 SNORA75B-201ENST00000384053 137 ntBASIC3.26□□□□□ -1.89
HOXD12P35452 SNORA44-201ENST00000384584 132 ntBASIC3.26□□□□□ -1.89
HOXD12P35452 SNORA26.7-201ENST00000391288 122 ntBASIC3.26□□□□□ -1.89
HOXD12P35452 RNU2-68P-201ENST00000410878 191 ntBASIC3.26□□□□□ -1.89
HOXD12P35452 RNU6-607P-201ENST00000411283 108 ntBASIC3.26□□□□□ -1.89
HOXD12P35452 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.26□□□□□ -1.89
HOXD12P35452 NDUFS5P4-201ENST00000412983 318 ntBASIC3.26□□□□□ -1.89
HOXD12P35452 AC074085.1-201ENST00000413598 418 ntBASIC3.26□□□□□ -1.89
HOXD12P35452 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC3.26□□□□□ -1.89
HOXD12P35452 AL353621.1-201ENST00000418219 243 ntBASIC3.26□□□□□ -1.89
HOXD12P35452 AC098614.2-201ENST00000426040 255 ntBASIC3.26□□□□□ -1.89
HOXD12P35452 MTND1P14-201ENST00000427400 950 ntBASIC3.26□□□□□ -1.89
HOXD12P35452 HMGB1P9-201ENST00000429856 646 ntBASIC3.26□□□□□ -1.89
HOXD12P35452 AC104332.2-201ENST00000429959 156 ntBASIC3.26□□□□□ -1.89
HOXD12P35452 AL357552.1-201ENST00000445254 415 ntBASIC3.26□□□□□ -1.89
HOXD12P35452 RPL31P41-201ENST00000477967 372 ntBASIC3.26□□□□□ -1.89
HOXD12P35452 HMGB1P30-201ENST00000492455 606 ntBASIC3.26□□□□□ -1.89
HOXD12P35452 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC3.26□□□□□ -1.89
HOXD12P35452 AC079140.5-201ENST00000507882 310 ntBASIC3.26□□□□□ -1.89
HOXD12P35452 AC113155.1-201ENST00000511141 769 ntBASIC3.26□□□□□ -1.89
HOXD12P35452 RNU6-1332P-201ENST00000516666 104 ntBASIC3.26□□□□□ -1.89
HOXD12P35452 SNORA25.17-201ENST00000517184 124 ntBASIC3.26□□□□□ -1.89
HOXD12P35452 RNA5SP454-201ENST00000517231 127 ntBASIC3.26□□□□□ -1.89
HOXD12P35452 AC025755.1-201ENST00000521306 278 ntBASIC3.26□□□□□ -1.89
HOXD12P35452 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC3.26□□□□□ -1.89
HOXD12P35452 AC022080.3-201ENST00000544433 482 ntBASIC3.26□□□□□ -1.89
HOXD12P35452 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC3.26□□□□□ -1.89
HOXD12P35452 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.26□□□□□ -1.89
HOXD12P35452 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC3.26□□□□□ -1.89
HOXD12P35452 MIR4790-201ENST00000577799 79 ntBASIC3.26□□□□□ -1.89
HOXD12P35452 AC138761.3-201ENST00000579993 334 ntBASIC3.26□□□□□ -1.89
HOXD12P35452 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.26□□□□□ -1.89
HOXD12P35452 AC023043.2-201ENST00000589678 1026 ntBASIC3.26□□□□□ -1.89
HOXD12P35452 AL356055.1-201ENST00000602528 446 ntBASIC3.26□□□□□ -1.89
HOXD12P35452 AC113139.1-201ENST00000605049 239 ntBASIC3.26□□□□□ -1.89
HOXD12P35452 AL627309.6-201ENST00000606857 840 ntBASIC3.26□□□□□ -1.89
HOXD12P35452 AL138726.1-201ENST00000614873 333 ntBASIC3.26□□□□□ -1.89
HOXD12P35452 AC099506.2-201ENST00000623074 221 ntBASIC3.26□□□□□ -1.89
HOXD12P35452 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC3.26□□□□□ -1.89
HOXD12P35452 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
HOXD12P35452 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
HOXD12P35452 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.26□□□□□ -1.89
HOXD12P35452 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.26□□□□□ -1.89
HOXD12P35452 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.26□□□□□ -1.89
HOXD12P35452 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.25□□□□□ -1.89
HOXD12P35452 AC068647.1-201ENST00000489539 2265 ntBASIC3.25□□□□□ -1.89
HOXD12P35452 AC138393.1-203ENST00000327086 343 ntBASIC3.25□□□□□ -1.89
HOXD12P35452 Y_RNA.212-201ENST00000364177 102 ntBASIC3.25□□□□□ -1.89
HOXD12P35452 Y_RNA.387-201ENST00000383918 102 ntBASIC3.25□□□□□ -1.89
HOXD12P35452 MIR548K-201ENST00000408406 116 ntBASIC3.25□□□□□ -1.89
HOXD12P35452 MIR548F5-201ENST00000408421 86 ntBASIC3.25□□□□□ -1.89
HOXD12P35452 RNU2-3P-201ENST00000410144 191 ntBASIC3.25□□□□□ -1.89
HOXD12P35452 RNA5SP344-201ENST00000411081 104 ntBASIC3.25□□□□□ -1.89
HOXD12P35452 RPS20P15-201ENST00000412792 311 ntBASIC3.25□□□□□ -1.89
HOXD12P35452 CYCSP33-201ENST00000414485 327 ntBASIC3.25□□□□□ -1.89
HOXD12P35452 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.25□□□□□ -1.89
HOXD12P35452 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.25□□□□□ -1.89
HOXD12P35452 AL139281.1-201ENST00000422120 335 ntBASIC3.25□□□□□ -1.89
HOXD12P35452 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC3.25□□□□□ -1.89
HOXD12P35452 AC244505.4-201ENST00000434905 287 ntBASIC3.25□□□□□ -1.89
HOXD12P35452 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC3.25□□□□□ -1.89
HOXD12P35452 SSXP5-201ENST00000443473 287 ntBASIC3.25□□□□□ -1.89
HOXD12P35452 RPL32P28-201ENST00000443577 397 ntBASIC3.25□□□□□ -1.89
HOXD12P35452 FTH1P25-201ENST00000447665 469 ntBASIC3.25□□□□□ -1.89
HOXD12P35452 RPL37P4-201ENST00000448908 268 ntBASIC3.25□□□□□ -1.89
HOXD12P35452 AC107399.1-201ENST00000451226 265 ntBASIC3.25□□□□□ -1.89
HOXD12P35452 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3.25□□□□□ -1.89
HOXD12P35452 RPL39P5-202ENST00000512505 151 ntBASIC3.25□□□□□ -1.89
HOXD12P35452 RNU1-86P-201ENST00000516108 154 ntBASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 115.3 ms