Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 AC021231.3-201ENST00000558497 370 ntBASIC4.8□□□□□ -1.64
RFX1P22670 AC023824.2-201ENST00000566185 400 ntBASIC4.8□□□□□ -1.64
RFX1P22670 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.8□□□□□ -1.64
RFX1P22670 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC4.8□□□□□ -1.64
RFX1P22670 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
RFX1P22670 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.8□□□□□ -1.64
RFX1P22670 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC4.8□□□□□ -1.64
RFX1P22670 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
RFX1P22670 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.8□□□□□ -1.64
RFX1P22670 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.8□□□□□ -1.64
RFX1P22670 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC4.8□□□□□ -1.64
RFX1P22670 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.8□□□□□ -1.64
RFX1P22670 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
RFX1P22670 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
RFX1P22670 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
RFX1P22670 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
RFX1P22670 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.8□□□□□ -1.64
RFX1P22670 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
RFX1P22670 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.79□□□□□ -1.64
RFX1P22670 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
RFX1P22670 AC010680.1-201ENST00000590024 3590 ntBASIC4.79□□□□□ -1.64
RFX1P22670 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
RFX1P22670 AL590135.1-201ENST00000422215 156 ntBASIC4.79□□□□□ -1.64
RFX1P22670 GPM6BP3-201ENST00000442797 145 ntBASIC4.79□□□□□ -1.64
RFX1P22670 PHBP16-201ENST00000446318 950 ntBASIC4.79□□□□□ -1.64
RFX1P22670 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC4.79□□□□□ -1.64
RFX1P22670 AP000870.1-201ENST00000472927 406 ntBASIC4.79□□□□□ -1.64
RFX1P22670 RPL30P14-201ENST00000482744 348 ntBASIC4.79□□□□□ -1.64
RFX1P22670 AC105137.1-201ENST00000484355 562 ntBASIC4.79□□□□□ -1.64
RFX1P22670 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC4.79□□□□□ -1.64
RFX1P22670 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC4.79□□□□□ -1.64
RFX1P22670 ACA59.2-201ENST00000517061 156 ntBASIC4.79□□□□□ -1.64
RFX1P22670 DEFB108E-201ENST00000524692 240 ntBASIC4.79□□□□□ -1.64
RFX1P22670 AC027288.2-201ENST00000553028 243 ntBASIC4.79□□□□□ -1.64
RFX1P22670 AC120057.2-201ENST00000571520 271 ntBASIC4.79□□□□□ -1.64
RFX1P22670 AC010900.2-201ENST00000604508 210 ntBASIC4.79□□□□□ -1.64
RFX1P22670 AL138963.2-201ENST00000605137 226 ntBASIC4.79□□□□□ -1.64
RFX1P22670 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4.79□□□□□ -1.64
RFX1P22670 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC4.79□□□□□ -1.64
RFX1P22670 MIR6891-201ENST00000618788 93 ntBASIC4.79□□□□□ -1.64
RFX1P22670 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
RFX1P22670 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
RFX1P22670 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC4.79□□□□□ -1.64
RFX1P22670 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.79□□□□□ -1.64
RFX1P22670 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.79□□□□□ -1.64
RFX1P22670 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
RFX1P22670 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.78□□□□□ -1.64
RFX1P22670 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
RFX1P22670 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
RFX1P22670 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC4.78□□□□□ -1.64
RFX1P22670 RNU6-1285P-201ENST00000363480 105 ntBASIC4.78□□□□□ -1.64
RFX1P22670 SNORD63-201ENST00000384262 68 ntBASIC4.78□□□□□ -1.64
RFX1P22670 RNU6-318P-201ENST00000384283 103 ntBASIC4.78□□□□□ -1.64
RFX1P22670 Y_RNA.504-201ENST00000384481 104 ntBASIC4.78□□□□□ -1.64
RFX1P22670 MIR659-201ENST00000384963 97 ntBASIC4.78□□□□□ -1.64
RFX1P22670 MIR670-201ENST00000390142 98 ntBASIC4.78□□□□□ -1.64
RFX1P22670 MIR708-201ENST00000390708 88 ntBASIC4.78□□□□□ -1.64
RFX1P22670 SNORA26.3-201ENST00000391119 136 ntBASIC4.78□□□□□ -1.64
RFX1P22670 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC4.78□□□□□ -1.64
RFX1P22670 AC245291.1-201ENST00000419501 328 ntBASIC4.78□□□□□ -1.64
RFX1P22670 SNORA71B-202ENST00000439232 272 ntBASIC4.78□□□□□ -1.64
RFX1P22670 RPS15AP7-201ENST00000439294 405 ntBASIC4.78□□□□□ -1.64
RFX1P22670 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.78□□□□□ -1.64
RFX1P22670 AC096638.1-201ENST00000444678 216 ntBASIC4.78□□□□□ -1.64
RFX1P22670 snoU13.28-201ENST00000459235 104 ntBASIC4.78□□□□□ -1.64
RFX1P22670 UQCRHP4-201ENST00000471686 272 ntBASIC4.78□□□□□ -1.64
RFX1P22670 RN7SL812P-201ENST00000493791 279 ntBASIC4.78□□□□□ -1.64
RFX1P22670 AC020593.1-201ENST00000507399 299 ntBASIC4.78□□□□□ -1.64
RFX1P22670 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC4.78□□□□□ -1.64
RFX1P22670 IGKV3OR22-2-201ENST00000517943 313 ntBASIC4.78□□□□□ -1.64
RFX1P22670 AC090897.2-201ENST00000581715 130 ntBASIC4.78□□□□□ -1.64
RFX1P22670 AC024220.1-201ENST00000603675 484 ntBASIC4.78□□□□□ -1.64
RFX1P22670 AL591034.3-201ENST00000605511 685 ntBASIC4.78□□□□□ -1.64
RFX1P22670 AC011476.5-201ENST00000615594 130 ntBASIC4.78□□□□□ -1.64
RFX1P22670 MESTIT1_1.1-201ENST00000618871 140 ntBASIC4.78□□□□□ -1.64
RFX1P22670 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
RFX1P22670 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
RFX1P22670 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
RFX1P22670 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC4.77□□□□□ -1.65
RFX1P22670 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
RFX1P22670 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
RFX1P22670 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC4.77□□□□□ -1.65
RFX1P22670 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
RFX1P22670 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
RFX1P22670 RNU6-1159P-201ENST00000362933 107 ntBASIC4.77□□□□□ -1.65
RFX1P22670 SNORD27-201ENST00000363981 72 ntBASIC4.77□□□□□ -1.65
RFX1P22670 Y_RNA.539-201ENST00000384635 107 ntBASIC4.77□□□□□ -1.65
RFX1P22670 Y_RNA.581-201ENST00000391017 97 ntBASIC4.77□□□□□ -1.65
RFX1P22670 RNU2-20P-201ENST00000410425 191 ntBASIC4.77□□□□□ -1.65
RFX1P22670 RPL23AP26-201ENST00000412728 464 ntBASIC4.77□□□□□ -1.65
RFX1P22670 AL358075.3-201ENST00000426289 226 ntBASIC4.77□□□□□ -1.65
RFX1P22670 RPS29P17-201ENST00000430795 166 ntBASIC4.77□□□□□ -1.65
RFX1P22670 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC4.77□□□□□ -1.65
RFX1P22670 AC244670.1-201ENST00000436879 112 ntBASIC4.77□□□□□ -1.65
RFX1P22670 BTF3L4P4-201ENST00000506381 449 ntBASIC4.77□□□□□ -1.65
RFX1P22670 RNU6-1338P-201ENST00000516328 91 ntBASIC4.77□□□□□ -1.65
RFX1P22670 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
RFX1P22670 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.77□□□□□ -1.65
RFX1P22670 HMGN2P15-201ENST00000585707 270 ntBASIC4.77□□□□□ -1.65
RFX1P22670 AL160290.3-201ENST00000604869 165 ntBASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 132.2 ms