Protein–RNA interactions for Protein: P14543

NID1, Nidogen-1, humanhuman

Predictions only

Length 1,247 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NID1P14543 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
NID1P14543 RNA5SP479-201ENST00000364858 117 ntBASIC4.27□□□□□ -1.73
NID1P14543 RNU6-1310P-201ENST00000384153 107 ntBASIC4.27□□□□□ -1.73
NID1P14543 RNU6-476P-201ENST00000384726 107 ntBASIC4.27□□□□□ -1.73
NID1P14543 SNORD37.2-201ENST00000391075 66 ntBASIC4.27□□□□□ -1.73
NID1P14543 Z98745.1-201ENST00000402553 494 ntBASIC4.27□□□□□ -1.73
NID1P14543 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.27□□□□□ -1.73
NID1P14543 MIR1290-201ENST00000408735 78 ntBASIC4.27□□□□□ -1.73
NID1P14543 RNU6-1199P-201ENST00000411249 104 ntBASIC4.27□□□□□ -1.73
NID1P14543 AC016831.4-201ENST00000438302 307 ntBASIC4.27□□□□□ -1.73
NID1P14543 UBE2CP3-201ENST00000502715 450 ntBASIC4.27□□□□□ -1.73
NID1P14543 RAC1P5-201ENST00000512182 576 ntBASIC4.27□□□□□ -1.73
NID1P14543 RN7SKP276-201ENST00000516242 268 ntBASIC4.27□□□□□ -1.73
NID1P14543 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.27□□□□□ -1.73
NID1P14543 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.27□□□□□ -1.73
NID1P14543 AC090877.1-201ENST00000561418 344 ntBASIC4.27□□□□□ -1.73
NID1P14543 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC4.27□□□□□ -1.73
NID1P14543 AC136624.4-201ENST00000573044 370 ntBASIC4.27□□□□□ -1.73
NID1P14543 MIR3613-201ENST00000579844 87 ntBASIC4.27□□□□□ -1.73
NID1P14543 MIR6129-201ENST00000616087 109 ntBASIC4.27□□□□□ -1.73
NID1P14543 PSMD5-AS1-215ENST00000640622 205 ntBASIC4.27□□□□□ -1.73
NID1P14543 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
NID1P14543 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.27□□□□□ -1.73
NID1P14543 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.27□□□□□ -1.73
NID1P14543 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
NID1P14543 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.27□□□□□ -1.73
NID1P14543 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
NID1P14543 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC4.26□□□□□ -1.73
NID1P14543 AC125257.1-201ENST00000560400 2930 ntBASIC4.26□□□□□ -1.73
NID1P14543 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
NID1P14543 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.26□□□□□ -1.73
NID1P14543 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
NID1P14543 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC4.26□□□□□ -1.73
NID1P14543 AK9-203ENST00000368948 2478 ntTSL 5 BASIC4.26□□□□□ -1.73
NID1P14543 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
NID1P14543 AC079741.1-201ENST00000321498 212 ntBASIC4.26□□□□□ -1.73
NID1P14543 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
NID1P14543 RNU1-140P-201ENST00000365040 165 ntBASIC4.26□□□□□ -1.73
NID1P14543 RNU6-763P-201ENST00000390865 106 ntBASIC4.26□□□□□ -1.73
NID1P14543 RNU2-54P-201ENST00000410299 190 ntBASIC4.26□□□□□ -1.73
NID1P14543 RPL27AP8-201ENST00000424277 446 ntBASIC4.26□□□□□ -1.73
NID1P14543 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC4.26□□□□□ -1.73
NID1P14543 AL451050.1-201ENST00000450126 415 ntBASIC4.26□□□□□ -1.73
NID1P14543 SNRPGP7-201ENST00000469016 106 ntBASIC4.26□□□□□ -1.73
NID1P14543 AC108022.1-201ENST00000493466 478 ntBASIC4.26□□□□□ -1.73
NID1P14543 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC4.26□□□□□ -1.73
NID1P14543 AC016632.1-201ENST00000503994 196 ntBASIC4.26□□□□□ -1.73
NID1P14543 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.26□□□□□ -1.73
NID1P14543 AC021269.2-201ENST00000532318 330 ntBASIC4.26□□□□□ -1.73
NID1P14543 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC4.26□□□□□ -1.73
NID1P14543 AC091178.1-203ENST00000584586 279 ntBASIC4.26□□□□□ -1.73
NID1P14543 AL020997.2-201ENST00000602607 184 ntBASIC4.26□□□□□ -1.73
NID1P14543 MESTIT1_1.1-201ENST00000618871 140 ntBASIC4.26□□□□□ -1.73
NID1P14543 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC4.26□□□□□ -1.73
NID1P14543 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.26□□□□□ -1.73
NID1P14543 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
NID1P14543 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
NID1P14543 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
NID1P14543 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.26□□□□□ -1.73
NID1P14543 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
NID1P14543 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
NID1P14543 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC4.26□□□□□ -1.73
NID1P14543 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
NID1P14543 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
NID1P14543 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC4.25□□□□□ -1.73
NID1P14543 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
NID1P14543 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
NID1P14543 SCN1A-220ENST00000641603 12506 ntBASIC4.25□□□□□ -1.73
NID1P14543 Y_RNA.179-201ENST00000363844 90 ntBASIC4.25□□□□□ -1.73
NID1P14543 RPL18P10-201ENST00000425606 538 ntBASIC4.25□□□□□ -1.73
NID1P14543 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC4.25□□□□□ -1.73
NID1P14543 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
NID1P14543 TRAPPC2P9-201ENST00000434556 343 ntBASIC4.25□□□□□ -1.73
NID1P14543 RNU7-197P-201ENST00000458836 62 ntBASIC4.25□□□□□ -1.73
NID1P14543 U8.19-201ENST00000459095 133 ntBASIC4.25□□□□□ -1.73
NID1P14543 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.25□□□□□ -1.73
NID1P14543 KRTAP5-14P-201ENST00000502328 121 ntBASIC4.25□□□□□ -1.73
NID1P14543 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC4.25□□□□□ -1.73
NID1P14543 Y_RNA.709-201ENST00000516952 92 ntBASIC4.25□□□□□ -1.73
NID1P14543 AC115990.1-201ENST00000526957 301 ntBASIC4.25□□□□□ -1.73
NID1P14543 HSPE1P4-201ENST00000550617 308 ntBASIC4.25□□□□□ -1.73
NID1P14543 CYCSP39-201ENST00000565821 309 ntBASIC4.25□□□□□ -1.73
NID1P14543 MIR1254-2-201ENST00000579553 63 ntBASIC4.25□□□□□ -1.73
NID1P14543 MIR6853-201ENST00000619642 74 ntBASIC4.25□□□□□ -1.73
NID1P14543 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC4.25□□□□□ -1.73
NID1P14543 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
NID1P14543 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.25□□□□□ -1.73
NID1P14543 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.25□□□□□ -1.73
NID1P14543 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.25□□□□□ -1.73
NID1P14543 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
NID1P14543 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.24□□□□□ -1.73
NID1P14543 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
NID1P14543 AC092435.4-201ENST00000623012 4159 ntBASIC4.24□□□□□ -1.73
NID1P14543 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
NID1P14543 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
NID1P14543 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
NID1P14543 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
NID1P14543 RNA5SP235-201ENST00000365411 114 ntBASIC4.24□□□□□ -1.73
NID1P14543 AC068538.1-201ENST00000376856 336 ntBASIC4.24□□□□□ -1.73
NID1P14543 MIR195-201ENST00000385194 87 ntBASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 111.9 ms