Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 RNU4-57P-201ENST00000515980 135 ntBASIC0.67□□□□□ -2.3
CFTRP13569 B3GNTL1P2-201ENST00000603673 288 ntBASIC0.67□□□□□ -2.3
CFTRP13569 NDUFA8P1-201ENST00000605525 367 ntBASIC0.67□□□□□ -2.3
CFTRP13569 AC004492.1-201ENST00000607036 742 ntBASIC0.67□□□□□ -2.3
CFTRP13569 AC073569.3-201ENST00000619055 682 ntBASIC0.67□□□□□ -2.3
CFTRP13569 USP12-203ENST00000620323 349 ntTSL 3 BASIC0.67□□□□□ -2.3
CFTRP13569 AC079416.3-201ENST00000624479 549 ntBASIC0.67□□□□□ -2.3
CFTRP13569 RPL26P27-201ENST00000414397 437 ntBASIC0.67□□□□□ -2.3
CFTRP13569 RPS27P16-201ENST00000425758 201 ntBASIC0.67□□□□□ -2.3
CFTRP13569 PRPS1P1-201ENST00000445305 876 ntBASIC0.67□□□□□ -2.3
CFTRP13569 RPL21P47-201ENST00000483696 477 ntBASIC0.67□□□□□ -2.3
CFTRP13569 RNU6-322P-201ENST00000516010 103 ntBASIC0.67□□□□□ -2.3
CFTRP13569 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC0.67□□□□□ -2.3
CFTRP13569 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC0.67□□□□□ -2.3
CFTRP13569 AC079598.5-201ENST00000547460 117 ntBASIC0.67□□□□□ -2.3
CFTRP13569 AC095057.3-201ENST00000567102 1157 ntBASIC0.67□□□□□ -2.3
CFTRP13569 AC136932.1-201ENST00000574771 208 ntBASIC0.67□□□□□ -2.3
CFTRP13569 HMGN1P30-201ENST00000589286 268 ntBASIC0.67□□□□□ -2.3
CFTRP13569 AL357094.1-201ENST00000603845 844 ntBASIC0.67□□□□□ -2.3
CFTRP13569 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC0.67□□□□□ -2.3
CFTRP13569 AL138713.1-201ENST00000624026 2130 ntBASIC0.66□□□□□ -2.3
CFTRP13569 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.66□□□□□ -2.3
CFTRP13569 AC092125.1-201ENST00000562568 1995 ntBASIC0.66□□□□□ -2.3
CFTRP13569 Y_RNA.518-201ENST00000384552 113 ntBASIC0.66□□□□□ -2.3
CFTRP13569 RPL22P22-201ENST00000395439 379 ntBASIC0.66□□□□□ -2.3
CFTRP13569 CCNG1P1-201ENST00000406783 885 ntBASIC0.66□□□□□ -2.3
CFTRP13569 AC069282.1-201ENST00000411911 526 ntBASIC0.66□□□□□ -2.3
CFTRP13569 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC0.66□□□□□ -2.3
CFTRP13569 AC004854.1-201ENST00000440356 349 ntBASIC0.66□□□□□ -2.3
CFTRP13569 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC0.66□□□□□ -2.3
CFTRP13569 GTF2IP12-201ENST00000456547 356 ntBASIC0.66□□□□□ -2.3
CFTRP13569 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC0.66□□□□□ -2.3
CFTRP13569 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC0.66□□□□□ -2.3
CFTRP13569 RNA5SP290-201ENST00000517133 127 ntBASIC0.66□□□□□ -2.3
CFTRP13569 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC0.66□□□□□ -2.3
CFTRP13569 SNORA77B-201ENST00000578179 125 ntBASIC0.66□□□□□ -2.3
CFTRP13569 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC0.66□□□□□ -2.3
CFTRP13569 AC010620.1-201ENST00000601088 1102 ntBASIC0.66□□□□□ -2.3
CFTRP13569 AC146944.4-201ENST00000602697 718 ntBASIC0.66□□□□□ -2.3
CFTRP13569 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC0.65□□□□□ -2.3
CFTRP13569 HSBP1P2-201ENST00000299671 229 ntBASIC0.65□□□□□ -2.31
CFTRP13569 Y_RNA.60-201ENST00000362831 98 ntBASIC0.65□□□□□ -2.31
CFTRP13569 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC0.65□□□□□ -2.31
CFTRP13569 SNORA50A-201ENST00000384225 134 ntBASIC0.65□□□□□ -2.31
CFTRP13569 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC0.65□□□□□ -2.31
CFTRP13569 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC0.65□□□□□ -2.31
CFTRP13569 RPS15AP9-201ENST00000439856 381 ntBASIC0.65□□□□□ -2.31
CFTRP13569 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC0.65□□□□□ -2.31
CFTRP13569 MEMO1P3-201ENST00000459811 302 ntBASIC0.65□□□□□ -2.31
CFTRP13569 AC079140.2-201ENST00000506193 142 ntBASIC0.65□□□□□ -2.31
CFTRP13569 RNU6-840P-201ENST00000517275 65 ntBASIC0.65□□□□□ -2.31
CFTRP13569 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC0.65□□□□□ -2.31
CFTRP13569 AP006587.4-201ENST00000526053 529 ntBASIC0.65□□□□□ -2.31
CFTRP13569 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC0.65□□□□□ -2.31
CFTRP13569 AC005951.2-201ENST00000576282 495 ntBASIC0.65□□□□□ -2.31
CFTRP13569 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC0.65□□□□□ -2.31
CFTRP13569 AL603758.1-201ENST00000618654 241 ntBASIC0.65□□□□□ -2.31
CFTRP13569 RNU6-414P-201ENST00000363705 104 ntBASIC0.64□□□□□ -2.31
CFTRP13569 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC0.64□□□□□ -2.31
CFTRP13569 MIR1267-201ENST00000408723 78 ntBASIC0.64□□□□□ -2.31
CFTRP13569 AL353621.1-201ENST00000418219 243 ntBASIC0.64□□□□□ -2.31
CFTRP13569 UBE2V2P3-201ENST00000433562 437 ntBASIC0.64□□□□□ -2.31
CFTRP13569 PGBD4P5-201ENST00000445958 426 ntBASIC0.64□□□□□ -2.31
CFTRP13569 AL157398.1-201ENST00000452981 186 ntBASIC0.64□□□□□ -2.31
CFTRP13569 SNORA31.17-201ENST00000516953 127 ntBASIC0.64□□□□□ -2.31
CFTRP13569 COPS8P3-201ENST00000526024 482 ntBASIC0.64□□□□□ -2.31
CFTRP13569 CENPUP1-201ENST00000526649 1202 ntBASIC0.64□□□□□ -2.31
CFTRP13569 AP003327.1-201ENST00000529684 127 ntBASIC0.64□□□□□ -2.31
CFTRP13569 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC0.64□□□□□ -2.31
CFTRP13569 POC1B-211ENST00000549504 581 ntTSL 5 BASIC0.64□□□□□ -2.31
CFTRP13569 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC0.64□□□□□ -2.31
CFTRP13569 AC012414.6-201ENST00000568241 401 ntBASIC0.64□□□□□ -2.31
CFTRP13569 MIR8063-201ENST00000621930 81 ntBASIC0.64□□□□□ -2.31
CFTRP13569 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC0.63□□□□□ -2.31
CFTRP13569 RNU5E-8P-201ENST00000363502 116 ntBASIC0.63□□□□□ -2.31
CFTRP13569 RNU6-968P-201ENST00000384076 107 ntBASIC0.63□□□□□ -2.31
CFTRP13569 SNORA29-201ENST00000384183 140 ntBASIC0.63□□□□□ -2.31
CFTRP13569 SNORD14D-201ENST00000384390 87 ntBASIC0.63□□□□□ -2.31
CFTRP13569 SNORA48.1-201ENST00000390879 135 ntBASIC0.63□□□□□ -2.31
CFTRP13569 AC013410.2-201ENST00000422627 201 ntBASIC0.63□□□□□ -2.31
CFTRP13569 AL606490.4-201ENST00000423117 127 ntBASIC0.63□□□□□ -2.31
CFTRP13569 AC019178.2-201ENST00000423595 505 ntBASIC0.63□□□□□ -2.31
CFTRP13569 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC0.63□□□□□ -2.31
CFTRP13569 AL929288.2-201ENST00000446368 407 ntBASIC0.63□□□□□ -2.31
CFTRP13569 RPL9P9-202ENST00000466501 579 ntBASIC0.63□□□□□ -2.31
CFTRP13569 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC0.63□□□□□ -2.31
CFTRP13569 PTP4A1P4-201ENST00000512479 322 ntBASIC0.63□□□□□ -2.31
CFTRP13569 AC126177.8-201ENST00000618339 1015 ntBASIC0.63□□□□□ -2.31
CFTRP13569 AL590396.4-201ENST00000636779 956 ntBASIC0.63□□□□□ -2.31
CFTRP13569 ZNF849P-201ENST00000594711 1566 ntBASIC0.63□□□□□ -2.31
CFTRP13569 RNU6-611P-201ENST00000384276 104 ntBASIC0.62□□□□□ -2.31
CFTRP13569 RNU2-48P-201ENST00000410694 191 ntBASIC0.62□□□□□ -2.31
CFTRP13569 AL592310.1-201ENST00000414330 671 ntBASIC0.62□□□□□ -2.31
CFTRP13569 MRPS36P1-201ENST00000421291 307 ntBASIC0.62□□□□□ -2.31
CFTRP13569 ELOCP14-201ENST00000428070 331 ntBASIC0.62□□□□□ -2.31
CFTRP13569 AC093422.3-201ENST00000428506 305 ntBASIC0.62□□□□□ -2.31
CFTRP13569 ELOCP7-201ENST00000439968 331 ntBASIC0.62□□□□□ -2.31
CFTRP13569 AC092170.1-201ENST00000440211 356 ntBASIC0.62□□□□□ -2.31
CFTRP13569 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC0.62□□□□□ -2.31
CFTRP13569 PRELID3BP1-201ENST00000457142 540 ntBASIC0.62□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 83.7 ms