Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC4.48□□□□□ -1.69
RARAP10276 UQCRBP2-201ENST00000447827 297 ntBASIC4.48□□□□□ -1.69
RARAP10276 RPL23AP3-201ENST00000453844 468 ntBASIC4.48□□□□□ -1.69
RARAP10276 RPS29P33-201ENST00000456717 146 ntBASIC4.48□□□□□ -1.69
RARAP10276 AC093840.1-201ENST00000511599 336 ntBASIC4.48□□□□□ -1.69
RARAP10276 LINC00933-203ENST00000559812 219 ntBASIC4.48□□□□□ -1.69
RARAP10276 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
RARAP10276 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
RARAP10276 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.48□□□□□ -1.69
RARAP10276 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
RARAP10276 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
RARAP10276 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.47□□□□□ -1.69
RARAP10276 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
RARAP10276 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
RARAP10276 AC118273.1-201ENST00000525324 3006 ntBASIC4.47□□□□□ -1.69
RARAP10276 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.47□□□□□ -1.69
RARAP10276 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.47□□□□□ -1.69
RARAP10276 RNU6-1145P-201ENST00000384246 107 ntBASIC4.47□□□□□ -1.69
RARAP10276 MIR124-3-201ENST00000384866 87 ntBASIC4.47□□□□□ -1.69
RARAP10276 RNU6-159P-201ENST00000391080 106 ntBASIC4.47□□□□□ -1.69
RARAP10276 MTHFD2P2-201ENST00000407725 247 ntBASIC4.47□□□□□ -1.69
RARAP10276 RNA5SP306-201ENST00000411087 107 ntBASIC4.47□□□□□ -1.69
RARAP10276 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.47□□□□□ -1.69
RARAP10276 IGKV1OR9-2-201ENST00000431378 277 ntBASIC4.47□□□□□ -1.69
RARAP10276 PHBP16-201ENST00000446318 950 ntBASIC4.47□□□□□ -1.69
RARAP10276 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.47□□□□□ -1.69
RARAP10276 RN7SL98P-201ENST00000462271 300 ntBASIC4.47□□□□□ -1.69
RARAP10276 RN7SL585P-201ENST00000470538 280 ntBASIC4.47□□□□□ -1.69
RARAP10276 RPS29P22-201ENST00000472363 168 ntBASIC4.47□□□□□ -1.69
RARAP10276 SNORA40.9-201ENST00000515895 93 ntBASIC4.47□□□□□ -1.69
RARAP10276 AC090281.1-201ENST00000523019 276 ntBASIC4.47□□□□□ -1.69
RARAP10276 AC006064.5-201ENST00000541782 248 ntBASIC4.47□□□□□ -1.69
RARAP10276 AC016256.1-201ENST00000547971 354 ntBASIC4.47□□□□□ -1.69
RARAP10276 AL391261.3-201ENST00000557194 520 ntBASIC4.47□□□□□ -1.69
RARAP10276 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC4.47□□□□□ -1.69
RARAP10276 AC006001.4-201ENST00000622243 395 ntBASIC4.47□□□□□ -1.69
RARAP10276 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
RARAP10276 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
RARAP10276 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.47□□□□□ -1.69
RARAP10276 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC4.47□□□□□ -1.69
RARAP10276 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.47□□□□□ -1.69
RARAP10276 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
RARAP10276 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.69
RARAP10276 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
RARAP10276 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
RARAP10276 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
RARAP10276 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
RARAP10276 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
RARAP10276 RNA5SP197-201ENST00000363357 119 ntBASIC4.46□□□□□ -1.7
RARAP10276 RNU6-137P-201ENST00000363680 108 ntBASIC4.46□□□□□ -1.7
RARAP10276 Y_RNA.331-201ENST00000365267 102 ntBASIC4.46□□□□□ -1.7
RARAP10276 RNU6-898P-201ENST00000365627 104 ntBASIC4.46□□□□□ -1.7
RARAP10276 RNU6-1181P-201ENST00000384191 106 ntBASIC4.46□□□□□ -1.7
RARAP10276 RNU6-1117P-201ENST00000384525 104 ntBASIC4.46□□□□□ -1.7
RARAP10276 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
RARAP10276 HLFP1-201ENST00000402375 499 ntBASIC4.46□□□□□ -1.7
RARAP10276 RNU6-1245P-201ENST00000411130 106 ntBASIC4.46□□□□□ -1.7
RARAP10276 AC011998.1-201ENST00000433403 117 ntBASIC4.46□□□□□ -1.7
RARAP10276 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC4.46□□□□□ -1.7
RARAP10276 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC4.46□□□□□ -1.7
RARAP10276 RN7SL810P-201ENST00000493031 276 ntBASIC4.46□□□□□ -1.7
RARAP10276 AC025554.1-201ENST00000505641 188 ntBASIC4.46□□□□□ -1.7
RARAP10276 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC4.46□□□□□ -1.7
RARAP10276 AC074133.1-201ENST00000515696 183 ntBASIC4.46□□□□□ -1.7
RARAP10276 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC4.46□□□□□ -1.7
RARAP10276 TRAV8-5-201ENST00000537369 341 ntBASIC4.46□□□□□ -1.7
RARAP10276 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC4.46□□□□□ -1.7
RARAP10276 AC140479.6-201ENST00000633535 357 ntBASIC4.46□□□□□ -1.7
RARAP10276 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
RARAP10276 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
RARAP10276 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
RARAP10276 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
RARAP10276 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.46□□□□□ -1.7
RARAP10276 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
RARAP10276 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.46□□□□□ -1.7
RARAP10276 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
RARAP10276 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC4.46□□□□□ -1.7
RARAP10276 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.46□□□□□ -1.7
RARAP10276 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
RARAP10276 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
RARAP10276 ZNF962P-201ENST00000443465 3140 ntBASIC4.45□□□□□ -1.7
RARAP10276 RNA5SP447-201ENST00000363749 119 ntBASIC4.45□□□□□ -1.7
RARAP10276 RNU6-142P-201ENST00000384019 107 ntBASIC4.45□□□□□ -1.7
RARAP10276 Y_RNA.441-201ENST00000384123 112 ntBASIC4.45□□□□□ -1.7
RARAP10276 RNU6-140P-201ENST00000384566 108 ntBASIC4.45□□□□□ -1.7
RARAP10276 MIR487A-201ENST00000385009 80 ntBASIC4.45□□□□□ -1.7
RARAP10276 RPL23AP26-201ENST00000412728 464 ntBASIC4.45□□□□□ -1.7
RARAP10276 RPL23AP36-201ENST00000413895 458 ntBASIC4.45□□□□□ -1.7
RARAP10276 BMS1P22-201ENST00000414726 313 ntBASIC4.45□□□□□ -1.7
RARAP10276 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.45□□□□□ -1.7
RARAP10276 AC092047.1-201ENST00000424997 240 ntBASIC4.45□□□□□ -1.7
RARAP10276 AL157831.1-201ENST00000426134 473 ntBASIC4.45□□□□□ -1.7
RARAP10276 SNORD108-201ENST00000459332 71 ntBASIC4.45□□□□□ -1.7
RARAP10276 RPL23AP14-201ENST00000468281 468 ntBASIC4.45□□□□□ -1.7
RARAP10276 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.45□□□□□ -1.7
RARAP10276 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.45□□□□□ -1.7
RARAP10276 RNU6-58P-201ENST00000517143 103 ntBASIC4.45□□□□□ -1.7
RARAP10276 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.45□□□□□ -1.7
RARAP10276 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC4.45□□□□□ -1.7
RARAP10276 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 128.9 ms