Protein–RNA interactions for Protein: O95292

VAPB, Vesicle-associated membrane protein-associated protein B/C, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPBO95292 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC1.47□□□□□ -2.17
VAPBO95292 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC1.47□□□□□ -2.17
VAPBO95292 AC006026.2-201ENST00000457376 180 ntBASIC1.47□□□□□ -2.17
VAPBO95292 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC1.47□□□□□ -2.17
VAPBO95292 AL121594.1-201ENST00000475906 575 ntBASIC1.47□□□□□ -2.17
VAPBO95292 RN7SKP256-201ENST00000517201 314 ntBASIC1.47□□□□□ -2.17
VAPBO95292 MTATP6P15-201ENST00000527233 835 ntBASIC1.47□□□□□ -2.17
VAPBO95292 AC135279.1-201ENST00000543493 504 ntBASIC1.47□□□□□ -2.17
VAPBO95292 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC1.47□□□□□ -2.17
VAPBO95292 MTCYBP33-201ENST00000575007 1130 ntBASIC1.47□□□□□ -2.17
VAPBO95292 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.47□□□□□ -2.17
VAPBO95292 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC1.47□□□□□ -2.17
VAPBO95292 MIR15A-201ENST00000607334 83 ntBASIC1.47□□□□□ -2.17
VAPBO95292 AC012360.2-201ENST00000609349 391 ntBASIC1.47□□□□□ -2.17
VAPBO95292 AC009269.6-201ENST00000621778 588 ntBASIC1.47□□□□□ -2.17
VAPBO95292 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC1.47□□□□□ -2.17
VAPBO95292 AC024940.5-201ENST00000622889 474 ntBASIC1.47□□□□□ -2.17
VAPBO95292 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC1.47□□□□□ -2.17
VAPBO95292 AC241585.2-209ENST00000638217 143 ntBASIC1.47□□□□□ -2.17
VAPBO95292 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
VAPBO95292 FARSBP1-201ENST00000435808 1778 ntBASIC1.47□□□□□ -2.17
VAPBO95292 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.47□□□□□ -2.17
VAPBO95292 ZNF736P9Y-201ENST00000439586 1345 ntBASIC1.46□□□□□ -2.18
VAPBO95292 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
VAPBO95292 MIR412-201ENST00000362142 91 ntBASIC1.46□□□□□ -2.18
VAPBO95292 RNU6-212P-201ENST00000362642 104 ntBASIC1.46□□□□□ -2.18
VAPBO95292 RNU6-60P-201ENST00000364792 103 ntBASIC1.46□□□□□ -2.18
VAPBO95292 MIR29B2-201ENST00000385055 81 ntBASIC1.46□□□□□ -2.18
VAPBO95292 SNORA40.4-201ENST00000390971 128 ntBASIC1.46□□□□□ -2.18
VAPBO95292 RNA5SP501-201ENST00000410990 112 ntBASIC1.46□□□□□ -2.18
VAPBO95292 Y_RNA.623-201ENST00000411128 95 ntBASIC1.46□□□□□ -2.18
VAPBO95292 AC074117.2-201ENST00000417130 397 ntBASIC1.46□□□□□ -2.18
VAPBO95292 AL365400.1-201ENST00000431854 640 ntBASIC1.46□□□□□ -2.18
VAPBO95292 PTENP1-201ENST00000447117 1215 ntBASIC1.46□□□□□ -2.18
VAPBO95292 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.46□□□□□ -2.18
VAPBO95292 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC1.46□□□□□ -2.18
VAPBO95292 AC117532.1-201ENST00000514638 323 ntBASIC1.46□□□□□ -2.18
VAPBO95292 RNU2-10P-201ENST00000516375 211 ntBASIC1.46□□□□□ -2.18
VAPBO95292 AC015720.1-201ENST00000565251 277 ntBASIC1.46□□□□□ -2.18
VAPBO95292 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.46□□□□□ -2.18
VAPBO95292 AL158042.1-201ENST00000605338 460 ntBASIC1.46□□□□□ -2.18
VAPBO95292 AC116312.1-201ENST00000606841 314 ntBASIC1.46□□□□□ -2.18
VAPBO95292 uc_338.12-201ENST00000616344 181 ntBASIC1.46□□□□□ -2.18
VAPBO95292 AL132822.1-201ENST00000617063 513 ntBASIC1.46□□□□□ -2.18
VAPBO95292 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC1.46□□□□□ -2.18
VAPBO95292 RNU4-13P-201ENST00000364019 141 ntBASIC1.45□□□□□ -2.18
VAPBO95292 RNU1-42P-201ENST00000364033 160 ntBASIC1.45□□□□□ -2.18
VAPBO95292 RNU4-68P-201ENST00000364314 141 ntBASIC1.45□□□□□ -2.18
VAPBO95292 RNU5E-6P-201ENST00000365574 115 ntBASIC1.45□□□□□ -2.18
VAPBO95292 RNU4-22P-201ENST00000411058 166 ntBASIC1.45□□□□□ -2.18
VAPBO95292 AC092809.3-201ENST00000415453 231 ntBASIC1.45□□□□□ -2.18
VAPBO95292 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC1.45□□□□□ -2.18
VAPBO95292 AL627311.1-201ENST00000431514 115 ntBASIC1.45□□□□□ -2.18
VAPBO95292 RNU6-548P-201ENST00000517083 115 ntBASIC1.45□□□□□ -2.18
VAPBO95292 SNORA31.24-201ENST00000517232 57 ntBASIC1.45□□□□□ -2.18
VAPBO95292 CR383656.8-201ENST00000549046 145 ntBASIC1.45□□□□□ -2.18
VAPBO95292 AL645939.4-201ENST00000604495 135 ntBASIC1.45□□□□□ -2.18
VAPBO95292 AP000860.1-201ENST00000605250 559 ntBASIC1.45□□□□□ -2.18
VAPBO95292 AC080013.3-201ENST00000606839 578 ntBASIC1.45□□□□□ -2.18
VAPBO95292 AC097478.2-201ENST00000610572 514 ntBASIC1.45□□□□□ -2.18
VAPBO95292 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
VAPBO95292 RNU6-743P-201ENST00000364151 106 ntBASIC1.44□□□□□ -2.18
VAPBO95292 RNU6-946P-201ENST00000383878 107 ntBASIC1.44□□□□□ -2.18
VAPBO95292 SNORD116-20-201ENST00000384529 92 ntBASIC1.44□□□□□ -2.18
VAPBO95292 CBX3P9-201ENST00000402326 552 ntBASIC1.44□□□□□ -2.18
VAPBO95292 RNU2-23P-201ENST00000410545 195 ntBASIC1.44□□□□□ -2.18
VAPBO95292 AC007098.1-201ENST00000420122 367 ntBASIC1.44□□□□□ -2.18
VAPBO95292 TRIM60P10Y-201ENST00000425589 751 ntBASIC1.44□□□□□ -2.18
VAPBO95292 USP9YP18-201ENST00000425912 695 ntBASIC1.44□□□□□ -2.18
VAPBO95292 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC1.44□□□□□ -2.18
VAPBO95292 MTCO3P5-201ENST00000433620 714 ntBASIC1.44□□□□□ -2.18
VAPBO95292 HMGB1P18-201ENST00000438801 619 ntBASIC1.44□□□□□ -2.18
VAPBO95292 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC1.44□□□□□ -2.18
VAPBO95292 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC1.44□□□□□ -2.18
VAPBO95292 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC1.44□□□□□ -2.18
VAPBO95292 AC112492.4-201ENST00000456549 352 ntBASIC1.44□□□□□ -2.18
VAPBO95292 snoU109.2-201ENST00000459316 135 ntBASIC1.44□□□□□ -2.18
VAPBO95292 RNA5SP61-201ENST00000516453 100 ntBASIC1.44□□□□□ -2.18
VAPBO95292 Y_RNA.689-201ENST00000516589 107 ntBASIC1.44□□□□□ -2.18
VAPBO95292 RNU6-965P-201ENST00000516721 96 ntBASIC1.44□□□□□ -2.18
VAPBO95292 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.44□□□□□ -2.18
VAPBO95292 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC1.44□□□□□ -2.18
VAPBO95292 AC011979.2-201ENST00000527568 352 ntBASIC1.44□□□□□ -2.18
VAPBO95292 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC1.44□□□□□ -2.18
VAPBO95292 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC1.44□□□□□ -2.18
VAPBO95292 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
VAPBO95292 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC1.44□□□□□ -2.18
VAPBO95292 BNIP3P31-201ENST00000604515 566 ntBASIC1.44□□□□□ -2.18
VAPBO95292 AC016925.2-201ENST00000605108 242 ntBASIC1.44□□□□□ -2.18
VAPBO95292 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.44□□□□□ -2.18
VAPBO95292 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.44□□□□□ -2.18
VAPBO95292 AC006338.1-201ENST00000618453 749 ntBASIC1.44□□□□□ -2.18
VAPBO95292 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.44□□□□□ -2.18
VAPBO95292 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
VAPBO95292 RNU6-511P-201ENST00000363496 107 ntBASIC1.43□□□□□ -2.18
VAPBO95292 RNU6-72P-201ENST00000384285 79 ntBASIC1.43□□□□□ -2.18
VAPBO95292 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
VAPBO95292 CISD1P1-201ENST00000393907 327 ntBASIC1.43□□□□□ -2.18
VAPBO95292 RN7SKP51-201ENST00000410781 304 ntBASIC1.43□□□□□ -2.18
VAPBO95292 PIGPP2-201ENST00000411569 458 ntBASIC1.43□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms