Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 OR9R1P-201ENST00000412200 877 ntBASIC1.46□□□□□ -2.18
UPK1BO75841 AC098592.1-201ENST00000419352 333 ntBASIC1.46□□□□□ -2.18
UPK1BO75841 AL589872.1-201ENST00000426602 288 ntBASIC1.46□□□□□ -2.18
UPK1BO75841 CALM2P2-201ENST00000428512 440 ntBASIC1.46□□□□□ -2.18
UPK1BO75841 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC1.46□□□□□ -2.18
UPK1BO75841 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC1.46□□□□□ -2.18
UPK1BO75841 AL445646.1-201ENST00000431784 216 ntBASIC1.46□□□□□ -2.18
UPK1BO75841 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC1.46□□□□□ -2.18
UPK1BO75841 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC1.46□□□□□ -2.18
UPK1BO75841 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.46□□□□□ -2.18
UPK1BO75841 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC1.46□□□□□ -2.18
UPK1BO75841 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC1.46□□□□□ -2.18
UPK1BO75841 FO393415.2-201ENST00000480085 343 ntBASIC1.46□□□□□ -2.18
UPK1BO75841 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC1.46□□□□□ -2.18
UPK1BO75841 PTP4A1P4-201ENST00000512479 322 ntBASIC1.46□□□□□ -2.18
UPK1BO75841 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC1.46□□□□□ -2.18
UPK1BO75841 SNORA43.2-201ENST00000516652 128 ntBASIC1.46□□□□□ -2.18
UPK1BO75841 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.46□□□□□ -2.18
UPK1BO75841 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC1.46□□□□□ -2.18
UPK1BO75841 AL031775.1-201ENST00000607014 887 ntBASIC1.46□□□□□ -2.18
UPK1BO75841 AC063943.3-201ENST00000615562 356 ntBASIC1.46□□□□□ -2.18
UPK1BO75841 AC108479.2-201ENST00000617314 601 ntBASIC1.46□□□□□ -2.18
UPK1BO75841 AC025034.2-201ENST00000623264 286 ntBASIC1.46□□□□□ -2.18
UPK1BO75841 AC093648.1-201ENST00000623546 606 ntBASIC1.46□□□□□ -2.18
UPK1BO75841 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC1.46□□□□□ -2.18
UPK1BO75841 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
UPK1BO75841 FARSBP1-201ENST00000435808 1778 ntBASIC1.45□□□□□ -2.18
UPK1BO75841 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
UPK1BO75841 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
UPK1BO75841 RNA5SP289-201ENST00000362332 137 ntBASIC1.45□□□□□ -2.18
UPK1BO75841 RNA5SP387-201ENST00000364226 106 ntBASIC1.45□□□□□ -2.18
UPK1BO75841 RNU6-1164P-201ENST00000364428 107 ntBASIC1.45□□□□□ -2.18
UPK1BO75841 RNU6-641P-201ENST00000384006 107 ntBASIC1.45□□□□□ -2.18
UPK1BO75841 SNORD14D-201ENST00000384390 87 ntBASIC1.45□□□□□ -2.18
UPK1BO75841 CBX3P9-201ENST00000402326 552 ntBASIC1.45□□□□□ -2.18
UPK1BO75841 Y_RNA.608-201ENST00000410647 95 ntBASIC1.45□□□□□ -2.18
UPK1BO75841 RNA5SP111-201ENST00000411386 101 ntBASIC1.45□□□□□ -2.18
UPK1BO75841 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
UPK1BO75841 ELOCP4-201ENST00000420090 333 ntBASIC1.45□□□□□ -2.18
UPK1BO75841 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.45□□□□□ -2.18
UPK1BO75841 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC1.45□□□□□ -2.18
UPK1BO75841 AC006946.1-201ENST00000429106 328 ntBASIC1.45□□□□□ -2.18
UPK1BO75841 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC1.45□□□□□ -2.18
UPK1BO75841 HSFY7P-201ENST00000432672 318 ntBASIC1.45□□□□□ -2.18
UPK1BO75841 HMGB1P31-201ENST00000437242 427 ntBASIC1.45□□□□□ -2.18
UPK1BO75841 HSFY8P-201ENST00000437934 318 ntBASIC1.45□□□□□ -2.18
UPK1BO75841 MTND2P29-201ENST00000438595 412 ntBASIC1.45□□□□□ -2.18
UPK1BO75841 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.45□□□□□ -2.18
UPK1BO75841 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC1.45□□□□□ -2.18
UPK1BO75841 AL360271.2-201ENST00000447710 161 ntBASIC1.45□□□□□ -2.18
UPK1BO75841 AC104058.1-201ENST00000448028 297 ntBASIC1.45□□□□□ -2.18
UPK1BO75841 HSFY5P-201ENST00000453726 309 ntBASIC1.45□□□□□ -2.18
UPK1BO75841 AC004924.1-201ENST00000480160 781 ntBASIC1.45□□□□□ -2.18
UPK1BO75841 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC1.45□□□□□ -2.18
UPK1BO75841 RNU1-86P-201ENST00000516108 154 ntBASIC1.45□□□□□ -2.18
UPK1BO75841 RNU1-107P-201ENST00000516617 154 ntBASIC1.45□□□□□ -2.18
UPK1BO75841 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC1.45□□□□□ -2.18
UPK1BO75841 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.45□□□□□ -2.18
UPK1BO75841 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC1.45□□□□□ -2.18
UPK1BO75841 AC022616.8-201ENST00000533569 253 ntBASIC1.45□□□□□ -2.18
UPK1BO75841 EIF4BP1-201ENST00000554881 351 ntBASIC1.45□□□□□ -2.18
UPK1BO75841 PCMTD1P2-201ENST00000565017 355 ntBASIC1.45□□□□□ -2.18
UPK1BO75841 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC1.45□□□□□ -2.18
UPK1BO75841 SEPT7P9-203ENST00000604116 343 ntBASIC1.45□□□□□ -2.18
UPK1BO75841 AL139286.2-201ENST00000606838 396 ntBASIC1.45□□□□□ -2.18
UPK1BO75841 RNU6-87P-201ENST00000607561 108 ntBASIC1.45□□□□□ -2.18
UPK1BO75841 uc_338.5-201ENST00000611839 155 ntBASIC1.45□□□□□ -2.18
UPK1BO75841 AC027807.2-201ENST00000616099 408 ntBASIC1.45□□□□□ -2.18
UPK1BO75841 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC1.45□□□□□ -2.18
UPK1BO75841 AP003485.2-201ENST00000623636 610 ntBASIC1.45□□□□□ -2.18
UPK1BO75841 AL157786.1-207ENST00000627771 695 ntBASIC1.45□□□□□ -2.18
UPK1BO75841 OR4G2P-201ENST00000328113 903 ntBASIC1.44□□□□□ -2.18
UPK1BO75841 SNORA5B-201ENST00000363786 132 ntBASIC1.44□□□□□ -2.18
UPK1BO75841 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC1.44□□□□□ -2.18
UPK1BO75841 MIR29C-201ENST00000385231 88 ntBASIC1.44□□□□□ -2.18
UPK1BO75841 MIR320A-201ENST00000385302 82 ntBASIC1.44□□□□□ -2.18
UPK1BO75841 BTF3L4P2-201ENST00000392798 346 ntBASIC1.44□□□□□ -2.18
UPK1BO75841 AL079342.1-201ENST00000401460 267 ntBASIC1.44□□□□□ -2.18
UPK1BO75841 RN7SKP51-201ENST00000410781 304 ntBASIC1.44□□□□□ -2.18
UPK1BO75841 MTCYBP5-201ENST00000423752 1135 ntBASIC1.44□□□□□ -2.18
UPK1BO75841 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC1.44□□□□□ -2.18
UPK1BO75841 AL365400.1-201ENST00000431854 640 ntBASIC1.44□□□□□ -2.18
UPK1BO75841 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC1.44□□□□□ -2.18
UPK1BO75841 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC1.44□□□□□ -2.18
UPK1BO75841 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC1.44□□□□□ -2.18
UPK1BO75841 FDX1P2-201ENST00000450769 375 ntBASIC1.44□□□□□ -2.18
UPK1BO75841 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC1.44□□□□□ -2.18
UPK1BO75841 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC1.44□□□□□ -2.18
UPK1BO75841 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC1.44□□□□□ -2.18
UPK1BO75841 ELOCP32-201ENST00000548625 324 ntBASIC1.44□□□□□ -2.18
UPK1BO75841 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC1.44□□□□□ -2.18
UPK1BO75841 HSBP1P1-201ENST00000555205 166 ntBASIC1.44□□□□□ -2.18
UPK1BO75841 UBE2Q2P8-201ENST00000560644 102 ntBASIC1.44□□□□□ -2.18
UPK1BO75841 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC1.44□□□□□ -2.18
UPK1BO75841 AC092140.2-201ENST00000618027 521 ntBASIC1.44□□□□□ -2.18
UPK1BO75841 SCARNA4-202ENST00000625402 129 ntBASIC1.44□□□□□ -2.18
UPK1BO75841 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.43□□□□□ -2.18
UPK1BO75841 RNA5SP465-201ENST00000391195 109 ntBASIC1.43□□□□□ -2.18
UPK1BO75841 RNA5SP212-201ENST00000391223 107 ntBASIC1.43□□□□□ -2.18
UPK1BO75841 MRPL42P2-201ENST00000403169 426 ntBASIC1.43□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 250.8 ms