Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 AL158823.1-201ENST00000418441 478 ntBASIC5.19□□□□□ -1.58
ACTN4O43707 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC5.19□□□□□ -1.58
ACTN4O43707 RPS23P7-201ENST00000466210 444 ntBASIC5.19□□□□□ -1.58
ACTN4O43707 RPS4XP13-201ENST00000483219 789 ntBASIC5.19□□□□□ -1.58
ACTN4O43707 TRAV28-201ENST00000557548 323 ntBASIC5.19□□□□□ -1.58
ACTN4O43707 MED28P6-201ENST00000558776 231 ntBASIC5.19□□□□□ -1.58
ACTN4O43707 ATP5J2P6-201ENST00000565203 266 ntBASIC5.19□□□□□ -1.58
ACTN4O43707 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC5.19□□□□□ -1.58
ACTN4O43707 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC5.19□□□□□ -1.58
ACTN4O43707 AL359198.2-201ENST00000611836 194 ntBASIC5.19□□□□□ -1.58
ACTN4O43707 AL391903.3-201ENST00000612158 163 ntBASIC5.19□□□□□ -1.58
ACTN4O43707 uc_338.18-201ENST00000615451 175 ntBASIC5.19□□□□□ -1.58
ACTN4O43707 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
ACTN4O43707 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC5.19□□□□□ -1.58
ACTN4O43707 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
ACTN4O43707 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC5.19□□□□□ -1.58
ACTN4O43707 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
ACTN4O43707 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
ACTN4O43707 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
ACTN4O43707 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
ACTN4O43707 AP001273.1-201ENST00000624493 3152 ntBASIC5.18□□□□□ -1.58
ACTN4O43707 OR51H2P-202ENST00000641424 3046 ntBASIC5.18□□□□□ -1.58
ACTN4O43707 RNU6-969P-201ENST00000383900 105 ntBASIC5.18□□□□□ -1.58
ACTN4O43707 MIR518D-201ENST00000385014 87 ntBASIC5.18□□□□□ -1.58
ACTN4O43707 AC074117.2-201ENST00000417130 397 ntBASIC5.18□□□□□ -1.58
ACTN4O43707 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC5.18□□□□□ -1.58
ACTN4O43707 NIP7P2-201ENST00000485801 544 ntBASIC5.18□□□□□ -1.58
ACTN4O43707 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC5.18□□□□□ -1.58
ACTN4O43707 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC5.18□□□□□ -1.58
ACTN4O43707 RNU6-703P-201ENST00000516946 107 ntBASIC5.18□□□□□ -1.58
ACTN4O43707 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC5.18□□□□□ -1.58
ACTN4O43707 AC007448.1-201ENST00000582714 234 ntBASIC5.18□□□□□ -1.58
ACTN4O43707 IPO5P1-202ENST00000600039 287 ntBASIC5.18□□□□□ -1.58
ACTN4O43707 AC136601.2-201ENST00000604356 474 ntBASIC5.18□□□□□ -1.58
ACTN4O43707 MIR6719-201ENST00000622428 87 ntBASIC5.18□□□□□ -1.58
ACTN4O43707 U6.95-201ENST00000636931 70 ntBASIC5.18□□□□□ -1.58
ACTN4O43707 MIR3914-2-201ENST00000637339 95 ntBASIC5.18□□□□□ -1.58
ACTN4O43707 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC5.18□□□□□ -1.58
ACTN4O43707 AC004925.1-201ENST00000624256 2706 ntBASIC5.18□□□□□ -1.58
ACTN4O43707 SUPT16HP1-201ENST00000537175 3133 ntBASIC5.18□□□□□ -1.58
ACTN4O43707 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
ACTN4O43707 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
ACTN4O43707 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
ACTN4O43707 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC5.17□□□□□ -1.58
ACTN4O43707 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
ACTN4O43707 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
ACTN4O43707 AC092268.1-201ENST00000342691 405 ntBASIC5.17□□□□□ -1.58
ACTN4O43707 RNU6-235P-201ENST00000362644 107 ntBASIC5.17□□□□□ -1.58
ACTN4O43707 RNU6-727P-201ENST00000363592 107 ntBASIC5.17□□□□□ -1.58
ACTN4O43707 SNORA25.7-201ENST00000364375 127 ntBASIC5.17□□□□□ -1.58
ACTN4O43707 AL645927.1-201ENST00000396783 406 ntBASIC5.17□□□□□ -1.58
ACTN4O43707 RPL26P27-201ENST00000414397 437 ntBASIC5.17□□□□□ -1.58
ACTN4O43707 AC063976.4-201ENST00000421971 163 ntBASIC5.17□□□□□ -1.58
ACTN4O43707 AC012306.1-201ENST00000423267 114 ntBASIC5.17□□□□□ -1.58
ACTN4O43707 AC078809.1-201ENST00000427601 140 ntBASIC5.17□□□□□ -1.58
ACTN4O43707 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC5.17□□□□□ -1.58
ACTN4O43707 TRAPPC2P9-201ENST00000434556 343 ntBASIC5.17□□□□□ -1.58
ACTN4O43707 AC108145.1-201ENST00000503770 153 ntBASIC5.17□□□□□ -1.58
ACTN4O43707 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC5.17□□□□□ -1.58
ACTN4O43707 RN7SKP276-201ENST00000516242 268 ntBASIC5.17□□□□□ -1.58
ACTN4O43707 RNA5SP360-201ENST00000516555 118 ntBASIC5.17□□□□□ -1.58
ACTN4O43707 SNORA31.20-201ENST00000517111 133 ntBASIC5.17□□□□□ -1.58
ACTN4O43707 RNU2-12P-201ENST00000517216 168 ntBASIC5.17□□□□□ -1.58
ACTN4O43707 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC5.17□□□□□ -1.58
ACTN4O43707 MIR3667-201ENST00000581025 74 ntBASIC5.17□□□□□ -1.58
ACTN4O43707 AL773545.4-201ENST00000637262 310 ntBASIC5.17□□□□□ -1.58
ACTN4O43707 AL513478.4-201ENST00000641636 310 ntBASIC5.17□□□□□ -1.58
ACTN4O43707 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
ACTN4O43707 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
ACTN4O43707 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC5.17□□□□□ -1.58
ACTN4O43707 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
ACTN4O43707 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
ACTN4O43707 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
ACTN4O43707 MAPK10-304ENST00000641341 3984 ntBASIC5.17□□□□□ -1.58
ACTN4O43707 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC5.17□□□□□ -1.58
ACTN4O43707 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
ACTN4O43707 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC5.16□□□□□ -1.58
ACTN4O43707 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
ACTN4O43707 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
ACTN4O43707 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
ACTN4O43707 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
ACTN4O43707 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC5.16□□□□□ -1.58
ACTN4O43707 RNU6-245P-201ENST00000384020 107 ntBASIC5.16□□□□□ -1.58
ACTN4O43707 BX510359.2-201ENST00000417920 305 ntBASIC5.16□□□□□ -1.58
ACTN4O43707 AL135790.2-201ENST00000437701 267 ntBASIC5.16□□□□□ -1.58
ACTN4O43707 RPS27P1-201ENST00000450552 247 ntBASIC5.16□□□□□ -1.58
ACTN4O43707 SCARNA10-201ENST00000459255 330 ntBASIC5.16□□□□□ -1.58
ACTN4O43707 RNU4-60P-201ENST00000517239 135 ntBASIC5.16□□□□□ -1.58
ACTN4O43707 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC5.16□□□□□ -1.58
ACTN4O43707 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC5.16□□□□□ -1.58
ACTN4O43707 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC5.16□□□□□ -1.58
ACTN4O43707 AC108081.1-201ENST00000604358 221 ntBASIC5.16□□□□□ -1.58
ACTN4O43707 MIR6853-201ENST00000619642 74 ntBASIC5.16□□□□□ -1.58
ACTN4O43707 AC068647.2-201ENST00000637380 353 ntBASIC5.16□□□□□ -1.58
ACTN4O43707 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
ACTN4O43707 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC5.16□□□□□ -1.58
ACTN4O43707 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
ACTN4O43707 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
ACTN4O43707 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
ACTN4O43707 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC5.15□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms